FFCP PHASE1:Hg19::chr4:57522476..57522500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84525 | |EntrezGene=84525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24961 | |HGNC=24961 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPY8 | |UniProt=Q9BPY8 | ||
|association_with_transcript=172bp_to_ENST00000381255_5end | |association_with_transcript=172bp_to_ENST00000381255_5end | ||
|cluster_id=chr4:57522476..57522500,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_7_at_HOPX_5end | |description=CAGE_peak_7_at_HOPX_5end | ||
|id=chr4:57522476..57522500,- | |id=chr4:57522476..57522500,- | ||
|ontology_enrichment_celltype=CL:0000838!3.09e-14!52;CL:0000542!8.49e-14!53;CL:0000051!8.49e-14!53;CL:0000236!1.03e-11!14;CL:0000988!5.16e-08!182;CL:0000791!9.47e-07!18;CL:0000789!9.47e-07!18;CL:0002420!9.47e-07!18;CL:0002419!9.47e-07!18;CL:0000790!9.47e-07!18 | |ontology_enrichment_celltype=CL:0000838!3.09e-14!52;CL:0000542!8.49e-14!53;CL:0000051!8.49e-14!53;CL:0000236!1.03e-11!14;CL:0000988!5.16e-08!182;CL:0000791!9.47e-07!18;CL:0000789!9.47e-07!18;CL:0002420!9.47e-07!18;CL:0002419!9.47e-07!18;CL:0000790!9.47e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.89e-18;13!CL:0000623;9.81e-15;3!CL:0000047;1.03e-10;2!CL:0000542;7.68e-10;53!CL:0000945;2.77e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.52e-16,14;CL:0000623,1.55e-14,3;CL:0000825,1.55e-14,3;CL:0000838,4.24e-13,52;CL:0000542,8.45e-13,53;CL:0000051,8.45e-13,53;CL:0000945,2.99e-09,24;CL:0000826,2.99e-09,24;CL:0000988,2.54e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.68e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-18!115;UBERON:0001869!1.64e-16!32;UBERON:0001893!2.06e-16!34;UBERON:0002791!2.62e-15!33;UBERON:0002020!9.86e-15!34;UBERON:0003528!9.86e-15!34;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0003080!3.42e-14!42;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0002619!6.99e-12!22;UBERON:0005743!8.75e-12!86;UBERON:0001017!3.42e-11!82;UBERON:0003056!1.21e-10!61;UBERON:0002616!2.45e-10!59;UBERON:0001950!5.03e-10!20;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0003075!5.10e-09!86;UBERON:0007284!5.10e-09!86;UBERON:0000200!2.50e-08!6;UBERON:0000955!2.51e-08!69;UBERON:0006238!2.51e-08!69;UBERON:0002346!3.24e-08!90 | |ontology_enrichment_uberon=UBERON:0007023!9.08e-18!115;UBERON:0001869!1.64e-16!32;UBERON:0001893!2.06e-16!34;UBERON:0002791!2.62e-15!33;UBERON:0002020!9.86e-15!34;UBERON:0003528!9.86e-15!34;UBERON:0002780!1.01e-14!41;UBERON:0001890!1.01e-14!41;UBERON:0006240!1.01e-14!41;UBERON:0003080!3.42e-14!42;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0002619!6.99e-12!22;UBERON:0005743!8.75e-12!86;UBERON:0001017!3.42e-11!82;UBERON:0003056!1.21e-10!61;UBERON:0002616!2.45e-10!59;UBERON:0001950!5.03e-10!20;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0003075!5.10e-09!86;UBERON:0007284!5.10e-09!86;UBERON:0000200!2.50e-08!6;UBERON:0000955!2.51e-08!69;UBERON:0006238!2.51e-08!69;UBERON:0002346!3.24e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.47e-13;32!UBERON:0001893;2.52e-13;34!UBERON:0002791;5.70e-12;32!UBERON:0000369;3.52e-11;4!UBERON:0002435;3.52e-11;4!UBERON:0000204;3.52e-11;4!UBERON:0003528;8.98e-11;34!UBERON:0002020;8.98e-11;34!UBERON:0001950;4.32e-10;20!UBERON:0002619;3.90e-09;22!UBERON:0000178;3.70e-08;15!UBERON:0000179;3.70e-08;15!UBERON:0000463;3.70e-08;15!UBERON:0000956;5.60e-08;25!UBERON:0000203;5.60e-08;25!UBERON:0000200;1.32e-07;6!UBERON:0002780;1.70e-07;41!UBERON:0001890;1.70e-07;41!UBERON:0005383;3.31e-07;3!UBERON:0005382;3.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.89e-15,32;UBERON:0001893,4.68e-14,34;UBERON:0002791,2.53e-12,32;UBERON:0003528,1.63e-11,34;UBERON:0002020,1.63e-11,34;UBERON:0002780,2.32e-11,41;UBERON:0001890,2.32e-11,41;UBERON:0003080,2.32e-11,41;UBERON:0006240,2.32e-11,41;UBERON:0000369,3.86e-11,4;UBERON:0002435,3.86e-11,4;UBERON:0000204,3.86e-11,4;UBERON:0010082,3.86e-11,4;UBERON:0001950,4.71e-10,20;UBERON:0001017,1.79e-09,81;UBERON:0002619,4.21e-09,22;UBERON:0000073,2.23e-08,53;UBERON:0002616,2.23e-08,53;UBERON:0001016,3.02e-08,89;UBERON:0000178,3.49e-08,15;UBERON:0000179,3.49e-08,15;UBERON:0000463,3.49e-08,15;UBERON:0000956,5.99e-08,25;UBERON:0000203,5.99e-08,25;UBERON:0000200,7.31e-08,6;UBERON:0001049,7.85e-08,56;UBERON:0005068,7.85e-08,56;UBERON:0006241,7.85e-08,56;UBERON:0007135,7.85e-08,56;UBERON:0005383,2.83e-07,3;UBERON:0005382,2.83e-07,3;UBERON:0003056,4.87e-07,61 | |||
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| ||
|short_description=p7@HOPX | |short_description=p7@HOPX | ||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p7@HOPX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOPX_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 172bp_to_ENST00000381255_5end |
EntrezGene: | HOPX |
HGNC: | 24961 |
UniProt: | Q9BPY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.52e-16 | 14 |
natural killer cell | 1.55e-14 | 3 |
pro-NK cell | 1.55e-14 | 3 |
lymphoid lineage restricted progenitor cell | 4.24e-13 | 52 |
lymphocyte | 8.45e-13 | 53 |
common lymphoid progenitor | 8.45e-13 | 53 |
lymphocyte of B lineage | 2.99e-09 | 24 |
pro-B cell | 2.99e-09 | 24 |
hematopoietic cell | 2.54e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 4.89e-15 | 32 |
telencephalon | 4.68e-14 | 34 |
regional part of telencephalon | 2.53e-12 | 32 |
brain grey matter | 1.63e-11 | 34 |
gray matter | 1.63e-11 | 34 |
regional part of forebrain | 2.32e-11 | 41 |
forebrain | 2.32e-11 | 41 |
anterior neural tube | 2.32e-11 | 41 |
future forebrain | 2.32e-11 | 41 |
corpus striatum | 3.86e-11 | 4 |
striatum | 3.86e-11 | 4 |
ventral part of telencephalon | 3.86e-11 | 4 |
future corpus striatum | 3.86e-11 | 4 |
neocortex | 4.71e-10 | 20 |
central nervous system | 1.79e-09 | 81 |
regional part of cerebral cortex | 4.21e-09 | 22 |
regional part of nervous system | 2.23e-08 | 53 |
regional part of brain | 2.23e-08 | 53 |
nervous system | 3.02e-08 | 89 |
blood | 3.49e-08 | 15 |
haemolymphatic fluid | 3.49e-08 | 15 |
organism substance | 3.49e-08 | 15 |
cerebral cortex | 5.99e-08 | 25 |
pallium | 5.99e-08 | 25 |
gyrus | 7.31e-08 | 6 |
neural tube | 7.85e-08 | 56 |
neural rod | 7.85e-08 | 56 |
future spinal cord | 7.85e-08 | 56 |
neural keel | 7.85e-08 | 56 |
caudate-putamen | 2.83e-07 | 3 |
dorsal striatum | 2.83e-07 | 3 |
pre-chordal neural plate | 4.87e-07 | 61 |