FFCP PHASE1:Hg19::chr9:8857983..8857998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6E4 | |UniProt=C9J6E4 | ||
|association_with_transcript=-207bp_to_ENST00000481079_5end | |association_with_transcript=-207bp_to_ENST00000481079_5end | ||
|cluster_id=chr9:8857983..8857998,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_PTPRD_5end | |description=CAGE_peak_4_at_PTPRD_5end | ||
|id=chr9:8857983..8857998,- | |id=chr9:8857983..8857998,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.40e-15;82!UBERON:0006241;1.94e-08;3!UBERON:0003057;1.94e-08;3!UBERON:0006215;7.28e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-50!115;UBERON:0001049!3.92e-44!57;UBERON:0005068!3.92e-44!57;UBERON:0006241!3.92e-44!57;UBERON:0007135!3.92e-44!57;UBERON:0005743!2.45e-41!86;UBERON:0001017!3.04e-40!82;UBERON:0002616!4.89e-37!59;UBERON:0000073!2.53e-36!94;UBERON:0001016!2.53e-36!94;UBERON:0003075!7.58e-36!86;UBERON:0007284!7.58e-36!86;UBERON:0002780!3.61e-35!41;UBERON:0001890!3.61e-35!41;UBERON:0006240!3.61e-35!41;UBERON:0000955!5.23e-34!69;UBERON:0006238!5.23e-34!69;UBERON:0003080!6.19e-34!42;UBERON:0002346!4.13e-33!90;UBERON:0001893!2.98e-31!34;UBERON:0002020!3.93e-31!34;UBERON:0003528!3.93e-31!34;UBERON:0002791!3.38e-30!33;UBERON:0001869!4.99e-29!32;UBERON:0003056!8.39e-28!61;UBERON:0000153!1.14e-23!129;UBERON:0007811!1.14e-23!129;UBERON:0000033!3.39e-22!123;UBERON:0000956!3.80e-22!25;UBERON:0000203!3.80e-22!25;UBERON:0002619!4.00e-21!22;UBERON:0004121!4.66e-21!169;UBERON:0000924!6.58e-20!173;UBERON:0006601!6.58e-20!173;UBERON:0001950!2.88e-19!20;UBERON:0000064!3.90e-14!219;UBERON:0000025!1.26e-13!194;UBERON:0000477!4.10e-12!286;UBERON:0004111!5.46e-12!241;UBERON:0000922!3.76e-11!612;UBERON:0003076!4.36e-11!15;UBERON:0003057!4.36e-11!15;UBERON:0002308!1.93e-10!9;UBERON:0000125!1.93e-10!9;UBERON:0002420!2.83e-10!9;UBERON:0007245!2.83e-10!9;UBERON:0010009!2.83e-10!9;UBERON:0010011!2.83e-10!9;UBERON:0000454!2.83e-10!9;UBERON:0000062!5.65e-10!511;UBERON:0000119!9.32e-10!312;UBERON:0000483!9.70e-10!309;UBERON:0000481!1.49e-09!347;UBERON:0000468!3.32e-09!659;UBERON:0000923!4.65e-09!604;UBERON:0005291!4.65e-09!604;UBERON:0006598!4.65e-09!604;UBERON:0002532!4.65e-09!604;UBERON:0004732!4.88e-09!13;UBERON:0002050!5.82e-09!605;UBERON:0005423!5.82e-09!605;UBERON:0000467!6.49e-09!625;UBERON:0000480!8.11e-09!626;UBERON:0000475!1.28e-08!365;UBERON:0009663!1.91e-08!7;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0000200!1.79e-07!6;UBERON:0002298!2.27e-07!8;UBERON:0001871!6.24e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.00e-52;34!UBERON:0003528;2.17e-51;34!UBERON:0002020;2.17e-51;34!UBERON:0002791;2.00e-50;32!UBERON:0001869;2.15e-50;32!UBERON:0002619;2.30e-47;22!UBERON:0002780;1.51e-46;41!UBERON:0001890;1.51e-46;41!UBERON:0000073;1.74e-45;53!UBERON:0002616;1.74e-45;53!UBERON:0001950;4.33e-43;20!UBERON:0000956;4.02e-41;25!UBERON:0000203;4.02e-41;25!UBERON:0000955;1.08e-30;68!UBERON:0001017;4.32e-28;75!UBERON:0001016;3.85e-24;83!UBERON:0000125;7.44e-22;9!UBERON:0002308;7.44e-22;9!UBERON:0002420;2.47e-21;9!UBERON:0007245;2.47e-21;9!UBERON:0010009;2.47e-21;9!UBERON:0010011;2.47e-21;9!UBERON:0000454;2.47e-21;9!UBERON:0004732;1.80e-17;13!UBERON:0009663;2.79e-17;7!UBERON:0007023;3.16e-17;114!UBERON:0004733;9.78e-16;12!UBERON:0002028;9.78e-16;12!UBERON:0002298;1.71e-15;6!UBERON:0000200;4.00e-15;6!UBERON:0001872;8.69e-13;5!UBERON:0002021;1.48e-12;5!UBERON:0001871;2.49e-12;6!UBERON:0000349;2.60e-12;5!UBERON:0011216;3.33e-10;132!UBERON:0000369;4.16e-10;4!UBERON:0002435;4.16e-10;4!UBERON:0000204;4.16e-10;4!UBERON:0002680;1.18e-09;9!UBERON:0001895;1.18e-09;9!UBERON:0000988;9.75e-09;3!UBERON:0001896;1.92e-08;3!UBERON:0005290;1.92e-08;3!UBERON:0002240;1.94e-08;3!UBERON:0005174;1.94e-08;3!UBERON:0001137;1.94e-08;3!UBERON:0001870;2.84e-08;3!UBERON:0010314;5.15e-08;132!UBERON:0005383;9.89e-08;3!UBERON:0005382;9.89e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.98e-87,56;UBERON:0005068,2.98e-87,56;UBERON:0006241,2.98e-87,56;UBERON:0007135,2.98e-87,56;UBERON:0000073,3.14e-80,53;UBERON:0002616,3.14e-80,53;UBERON:0001017,1.11e-69,81;UBERON:0000955,2.02e-68,68;UBERON:0006238,2.02e-68,68;UBERON:0002780,5.82e-65,41;UBERON:0001890,5.82e-65,41;UBERON:0003080,5.82e-65,41;UBERON:0006240,5.82e-65,41;UBERON:0001016,6.22e-64,89;UBERON:0003075,1.91e-63,82;UBERON:0007284,1.91e-63,82;UBERON:0001893,1.05e-61,34;UBERON:0003528,1.92e-61,34;UBERON:0002020,1.92e-61,34;UBERON:0002346,7.36e-60,86;UBERON:0007023,6.34e-59,114;UBERON:0002791,8.74e-57,32;UBERON:0001869,1.15e-56,32;UBERON:0010371,4.04e-49,104;UBERON:0002619,2.66e-47,22;UBERON:0003056,1.27e-45,61;UBERON:0001950,5.24e-43,20;UBERON:0000956,4.58e-41,25;UBERON:0000203,4.58e-41,25;UBERON:0010314,2.93e-39,132;UBERON:0004121,5.07e-32,171;UBERON:0000924,5.07e-32,171;UBERON:0006601,5.07e-32,171;UBERON:0011216,3.07e-30,223;UBERON:0000025,1.64e-23,192;UBERON:0003076,3.26e-22,15;UBERON:0003057,3.26e-22,15;UBERON:0000125,6.81e-22,9;UBERON:0002308,6.81e-22,9;UBERON:0002420,1.63e-21,9;UBERON:0007245,1.63e-21,9;UBERON:0010009,1.63e-21,9;UBERON:0010011,1.63e-21,9;UBERON:0000454,1.63e-21,9;UBERON:0004111,1.17e-18,240;UBERON:0004732,1.42e-17,13;UBERON:0009663,2.52e-17,7;UBERON:0004733,8.10e-16,12;UBERON:0002028,8.10e-16,12;UBERON:0007277,8.10e-16,12;UBERON:0002298,1.64e-15,6;UBERON:0000200,4.18e-15,6;UBERON:0000483,2.48e-14,306;UBERON:0000119,4.80e-14,309;UBERON:0001872,1.13e-12,5;UBERON:0002021,1.40e-12,5;UBERON:0000349,1.83e-12,5;UBERON:0001871,2.27e-12,6;UBERON:0000369,3.53e-10,4;UBERON:0002435,3.53e-10,4;UBERON:0000204,3.53e-10,4;UBERON:0010082,3.53e-10,4;UBERON:0002680,1.03e-09,9;UBERON:0001895,1.03e-09,9;UBERON:0010092,1.03e-09,9;UBERON:0000988,9.78e-09,3;UBERON:0002240,1.78e-08,3;UBERON:0005174,1.78e-08,3;UBERON:0001137,1.78e-08,3;UBERON:0001896,1.83e-08,3;UBERON:0005290,1.83e-08,3;UBERON:0010096,1.83e-08,3;UBERON:0000922,1.91e-08,592;UBERON:0001870,2.99e-08,3;UBERON:0005383,8.41e-08,3;UBERON:0005382,8.41e-08,3;UBERON:0005423,2.22e-07,581;UBERON:0000923,3.10e-07,560;UBERON:0010316,3.10e-07,560;UBERON:0005291,3.10e-07,560;UBERON:0006598,3.10e-07,560;UBERON:0010317,3.10e-07,560;UBERON:0002532,3.10e-07,560;UBERON:0002050,4.63e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0.873765488520689,0.527533956456907,0.123766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.756278537312543,0.443458794925128,0.790513071238134,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,1.16193942869518,1.0366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,1.54657762555539,1.67516265334349,0.637938751653163,0,0,0,0.613457458595699,0,0,0,0,0,0,1.20378439891088,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.13345112812495,0.27470839445503,0.330037999682352,0,0,0,0.193341436584244,0,0,0,0.429680979473094,0,0.0852266274161009,0.712256285173899,0,0.384380134730212,0,0.30347334256665,0,0,0.6970372701606,0.924100740528266,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,1.9882952955326,6.18945432206256,0,0,0,1.79323189425963,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,3.87733098438087,7.2359116566244,5.98841394003583,0,0,0,0,0,0,0,0,0.173624994933292,2.65722415744152,3.85908603601305,1.52581736317083,11.9425600725723,2.65992857058193,0.87754158861589,0,0,1.38510465306835,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0.995261931078505,1.85760885457012,0.611030144933625,0,0,0,20.4225432931451,0,3.04543779442941,0,0,0,0.789168805698781,0,3.0607276163049,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,1.04836000945218,1.20390222730132,0,0,0,0.0969890164884194,0.617792886840502,1.35588444468319,0.548167698587004,0.397429223405979,5.50803924816145,0,0.0801588202515337,0.85381197895741,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0,0,5.4037825983881,13.2798217525233,0,0,0,0.837847203816763,0.916641696046735,0,0,0,0.669514372325618,0.940568614814168,0,1.16495949527454,0,0,0,0,0,2.38568906942791,5.85674646279775,0.321506296930038,0.275078873194468,0.415440338029185,0,0,6.13570522246049,0,3.23103399926713,3.25218446436988,0,0.35857467866569,0,1.42939065274673,0,0.25426853765475,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,5.17131825446202,7.9339561045614,0,0,0.320362237703084,3.45849471219265,0.414239055347196,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,6.00916467391199,3.44045517414043,5.76831067991632,12.5434733941595,0,0,0,0,0,0,1.01444720027578,0.149254802886874,0.467426619694449,0,0,0,0,0.228840068396924,0,0.310874401165561,0.295710299979268,0.477890301491107,0,0.465788870628778,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,8.84853991371077,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,7.4505901111893,1.41696576325585,11.8129055702292,6.76884001994492,4.03314713954749,5.53258019713743,5.65164759711479,1.42769420259154,0,0,0,0,0,0,0.397832444232549,1.5794168953344,0.40341013740704,0,0,0,0,7.36159672340502,7.02970288752463,6.20060389503552,7.92697627423835,1.09394961803644,0.548257766857182,0.496211178389294,0,0,1.60710550763486,0.672567444437648,0.606965604236632,0,0.887023701626388,0,0,12.914249265598,6.8403684505363,0,0,0.863424021355654,2.51384943865603,0,3.65263488203798,0,0,2.21577286947635,0,0.697448552208751,3.30330717374901,0,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,1.80713731262336,0,0,3.16414048242573,0.218559560503957,0,0.980593287015622,0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| ||
|short_description=p4@PTPRD | |short_description=p4@PTPRD | ||
}} | }} |
Latest revision as of 02:14, 18 September 2015
Short description: | p4@PTPRD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRD_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -207bp_to_ENST00000481079_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J6E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data