FFCP PHASE1:Hg19::chr13:78549607..78549618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1910 | |EntrezGene=1910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3180 | |HGNC=3180 | ||
|TSSclassifier=strong | |||
|UniProt=P24530 | |UniProt=P24530 | ||
|association_with_transcript=45bp_to_NM_000115,uc001vkq.1_5end | |association_with_transcript=45bp_to_NM_000115,uc001vkq.1_5end | ||
|cluster_id=chr13:78549607..78549618,- | |||
|description=CAGE_peak_14_at_EDNRB_5end | |description=CAGE_peak_14_at_EDNRB_5end | ||
|id=chr13:78549607..78549618,- | |id=chr13:78549607..78549618,- | ||
|ontology_enrichment_celltype=CL:0002541;1.66e-74;3!CL:0000349;1.12e-32;19!CL:0002253;1.46e-13;2!CL:0002577;1.74e-09;3!CL:0000083;1.31e-07;4!CL:0002563;1.98e-07;4 | |ontology_enrichment_celltype=CL:0002541!5.36e-24!3;CL:0000349!5.41e-11!3;CL:0002577!5.41e-11!3;CL:0002563!1.42e-08!4;CL:0002537!4.94e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;1.66e-74;3!CL:0000349;1.12e-32;19!CL:0002253;1.46e-13;2!CL:0002577;1.74e-09;3!CL:0000083;1.31e-07;4!CL:0002563;1.98e-07;4 | ||
|ontology_enrichment_disease=DOID:1799;2.16e-26;1!DOID:10165;2.16e-26;1!DOID:1798;2.16e-26;1!DOID:1793;1.31e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0002541,1.29e-74,3;CL:0000349,9.83e-33,19;CL:0002253,1.55e-13,2;CL:0002577,1.67e-09,3;CL:0000083,1.31e-07,4;CL:0002563,2.04e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0003124;1.66e-74;3!UBERON:0000920;1.66e-74;3!UBERON:0005631;6.10e-40;10!UBERON:0000158;6.10e-40;10!UBERON:0000478;5.78e-26;24!UBERON:0001987;1.98e-07;4!UBERON:0001052;1.98e-07;4!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!3.06e-09!1;DOID:10165!3.06e-09!1;DOID:1798!3.06e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.16e-26;1!DOID:10165;2.16e-26;1!DOID:1798;2.16e-26;1!DOID:1793;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.16e-26,1;DOID:10165,2.16e-26,1;DOID:1798,2.16e-26,1;DOID:1793,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003124!8.00e-39!7;UBERON:0005631!8.52e-34!14;UBERON:0000158!8.52e-34!14;UBERON:0000476!5.36e-24!3;UBERON:0000920!5.36e-24!3;UBERON:0000478!2.83e-19!24;UBERON:0001987!1.55e-17!4;UBERON:0004340!1.55e-17!4;UBERON:0004923!1.02e-11!57;UBERON:0006331!1.60e-10!3;UBERON:0001242!1.42e-08!4;UBERON:0001262!1.42e-08!4;UBERON:0004786!1.42e-08!4;UBERON:0004808!1.42e-08!4;UBERON:0001277!1.42e-08!4;UBERON:0002038!1.53e-08!1;UBERON:0009661!1.53e-08!1;UBERON:0003350!5.09e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.66e-74;3!UBERON:0000920;1.66e-74;3!UBERON:0005631;6.10e-40;10!UBERON:0000158;6.10e-40;10!UBERON:0000478;5.78e-26;24!UBERON:0001987;1.98e-07;4!UBERON:0001052;1.98e-07;4!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.29e-74,3;UBERON:0003124,1.22e-56,7;UBERON:0005631,3.06e-44,14;UBERON:0000158,3.06e-44,14;UBERON:0000478,5.21e-26,24;UBERON:0004923,1.32e-13,66;UBERON:0001987,1.92e-07,4;UBERON:0004340,1.92e-07,4;UBERON:0001052,2.04e-07,4;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4 | |||
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|short_description=p14@EDNRB | |short_description=p14@EDNRB | ||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p14@EDNRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_EDNRB_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_NM_000115, uc001vkq.1_5end |
EntrezGene: | EDNRB |
HGNC: | 3180 |
UniProt: | P24530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.29e-74 | 3 |
extraembryonic cell | 9.83e-33 | 19 |
epithelial cell of large intestine | 1.55e-13 | 2 |
placental epithelial cell | 1.67e-09 | 3 |
epithelial cell of pancreas | 1.31e-07 | 4 |
intestinal epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.29e-74 | 3 |
chorion | 1.22e-56 | 7 |
extraembryonic membrane | 3.06e-44 | 14 |
membranous layer | 3.06e-44 | 14 |
extraembryonic structure | 5.21e-26 | 24 |
organ component layer | 1.32e-13 | 66 |
placenta | 1.92e-07 | 4 |
allantois | 1.92e-07 | 4 |
rectum | 2.04e-07 | 4 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.16e-26 | 1 |
endocrine pancreas cancer | 2.16e-26 | 1 |
pancreatic endocrine carcinoma | 2.16e-26 | 1 |
pancreatic cancer | 1.31e-07 | 4 |