FFCP PHASE1:Hg19::chr19:40697978..40698010,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:40697978..40698010,+ to FFCP PHASE1:Hg19::chr19:40697978..40698010,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4294 | |EntrezGene=4294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6849 | |HGNC=6849 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_BC111460_5end | |||
|cluster_id=chr19:40697978..40698010,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_6_at_MAP3K10_5end | |||
|id=chr19:40697978..40698010,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0000159;1.82e-11;2!CL:0000047;3.18e-11;2!CL:0000632;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0000159,1.82e-11,2;CL:0000632,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1!DOID:3371;4.66e-21;1!DOID:4549;4.66e-21;1!DOID:5861;4.66e-21;1!DOID:6496;4.66e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1;DOID:3371,3.45e-21,1;DOID:4549,3.45e-21,1;DOID:5861,3.45e-21,1;DOID:6496,3.45e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.43e-22!82;UBERON:0005743!1.53e-21!86;UBERON:0000073!3.68e-21!94;UBERON:0001016!3.68e-21!94;UBERON:0001893!3.51e-17!34;UBERON:0001049!4.76e-17!57;UBERON:0005068!4.76e-17!57;UBERON:0006241!4.76e-17!57;UBERON:0007135!4.76e-17!57;UBERON:0000955!7.63e-17!69;UBERON:0006238!7.63e-17!69;UBERON:0002791!3.50e-16!33;UBERON:0002616!7.93e-16!59;UBERON:0001869!1.53e-15!32;UBERON:0002780!2.77e-15!41;UBERON:0001890!2.77e-15!41;UBERON:0006240!2.77e-15!41;UBERON:0002020!3.51e-15!34;UBERON:0003528!3.51e-15!34;UBERON:0003080!1.01e-14!42;UBERON:0002346!1.11e-13!90;UBERON:0003075!6.83e-13!86;UBERON:0007284!6.83e-13!86;UBERON:0002619!7.51e-13!22;UBERON:0001950!1.13e-12!20;UBERON:0000956!3.30e-12!25;UBERON:0000203!3.30e-12!25;UBERON:0000924!7.79e-11!173;UBERON:0006601!7.79e-11!173;UBERON:0000153!1.12e-10!129;UBERON:0007811!1.12e-10!129;UBERON:0000033!1.24e-10!123;UBERON:0004121!3.69e-10!169;UBERON:0003056!4.51e-10!61;UBERON:0000475!5.17e-07!365;UBERON:0001872!9.16e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0004909;1.82e-11;2!UBERON:0002240;6.56e-08;3!UBERON:0002418;6.56e-08;3!UBERON:0005174;6.56e-08;3!UBERON:0004755;6.56e-08;3!UBERON:0001137;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0004909,1.82e-11,2;UBERON:0002418,5.93e-08,3;UBERON:0004755,5.93e-08,3;UBERON:0002240,7.26e-08,3;UBERON:0005174,7.26e-08,3;UBERON:0001137,7.26e-08,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.123563938946503,0,0.404406797884062,0,0.234264445725339,0,0,0.728341138602278,0,0,0.61214552326098,0.063186579628488,1.9542044523884,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,1.5003541537555,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0,0.271808412147228,0.104602846312333,0,0.577901179803038,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,0.728994679896296,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.943595651135378,0,0,0.637724760305049,0.371807292777007,0,0,0,0,0.352675943690684,0,0.385375350578757,0,0,0.205116364240755,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.19024743058172,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0.328863867814245,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,7.15874763505871,0,0,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0.150962843566674,0,0,0.940634592723046,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.883889372481891,0.436350690340377,0,0.371995018166751,0.924351257262837,0.865253124247578,0.126166424835079,0,0.126698501011437,0.101988829741982,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.123563938946503,0,0.404406797884062,0,0.234264445725339,0,0,0.728341138602278,0,0,0.61214552326098,0.063186579628488,1.9542044523884,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,1.5003541537555,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0,0.271808412147228,0.104602846312333,0,0.577901179803038,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,0.728994679896296,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.943595651135378,0,0,0.637724760305049,0.371807292777007,0,0,0,0,0.352675943690684,0,0.385375350578757,0,0,0.205116364240755,0.504143392443436,0.553258019713743,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.19024743058172,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0.328863867814245,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,7.15874763505871,0,0,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0.150962843566674,0,0,0.940634592723046,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.883889372481891,0.436350690340377,0,0.371995018166751,0.924351257262837,0.865253124247578,0.126166424835079,0,0.126698501011437,0.101988829741982,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@MAP3K10 | |||
}} | }} |
Latest revision as of 01:20, 18 September 2015
Short description: | p6@MAP3K10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAP3K10_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 41bp_to_BC111460_5end |
EntrezGene: | MAP3K10 |
HGNC: | 6849 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
seromucus secreting cell | 1.82e-11 | 2 |
hepatic stellate cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
epithelium of gonad | 1.82e-11 | 2 |
cartilage tissue | 5.93e-08 | 3 |
skeletal tissue | 5.93e-08 | 3 |
spinal cord | 7.26e-08 | 3 |
dorsal region element | 7.26e-08 | 3 |
dorsum | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |
chondrosarcoma | 3.45e-21 | 1 |
extraosseous chondrosarcoma | 3.45e-21 | 1 |
myxoid chondrosarcoma | 3.45e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 3.45e-21 | 1 |