FFCP PHASE1:Hg19::chr1:40781765..40781783,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:40781765..40781783,- to FFCP PHASE1:Hg19::chr1:40781765..40781783,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1298 | |EntrezGene=1298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2218 | |HGNC=2218 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000490132_5end | |||
|cluster_id=chr1:40781765..40781783,- | |||
|description=CAGE_peak_6_at_COL9A2_5end | |||
|id=chr1:40781765..40781783,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000771;8.64e-11;2!CL:0000081;5.37e-07;11!CL:0000064;9.05e-07;3!CL:0000067;9.05e-07;3!CL:0005012;9.05e-07;3!CL:0002304;9.05e-07;3!CL:0000346;9.05e-07;3!CL:1000428;9.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,8.28e-11,2;CL:0000064,4.86e-07,3;CL:0000067,4.86e-07,3;CL:0005012,4.86e-07,3;CL:0002304,4.86e-07,3;CL:0000081,5.55e-07,11;CL:0000346,7.60e-07,3;CL:1000428,7.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.30e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.19e-33!57;UBERON:0005068!3.19e-33!57;UBERON:0006241!3.19e-33!57;UBERON:0007135!3.19e-33!57;UBERON:0003075!2.79e-29!86;UBERON:0007284!2.79e-29!86;UBERON:0002346!2.81e-28!90;UBERON:0005743!6.31e-28!86;UBERON:0002616!8.33e-28!59;UBERON:0001017!4.59e-27!82;UBERON:0007023!1.42e-25!115;UBERON:0000073!5.54e-25!94;UBERON:0001016!5.54e-25!94;UBERON:0000955!5.59e-24!69;UBERON:0006238!5.59e-24!69;UBERON:0003080!3.84e-22!42;UBERON:0003056!3.84e-22!61;UBERON:0002020!1.47e-21!34;UBERON:0003528!1.47e-21!34;UBERON:0001893!2.46e-21!34;UBERON:0002780!3.21e-21!41;UBERON:0001890!3.21e-21!41;UBERON:0006240!3.21e-21!41;UBERON:0002791!1.91e-20!33;UBERON:0001869!5.72e-19!32;UBERON:0000153!1.06e-15!129;UBERON:0007811!1.06e-15!129;UBERON:0000033!1.14e-15!123;UBERON:0002619!6.44e-15!22;UBERON:0004121!7.62e-15!169;UBERON:0001950!9.12e-15!20;UBERON:0000924!1.18e-14!173;UBERON:0006601!1.18e-14!173;UBERON:0000956!5.65e-14!25;UBERON:0000203!5.65e-14!25;UBERON:0003076!2.31e-12!15;UBERON:0003057!2.31e-12!15;UBERON:0002298!7.83e-11!8;UBERON:0004732!1.20e-10!13;UBERON:0004733!1.89e-09!12;UBERON:0002028!1.89e-09!12;UBERON:0007277!1.89e-09!12;UBERON:0002308!1.94e-09!9;UBERON:0000125!1.94e-09!9;UBERON:0000178!6.49e-09!15;UBERON:0000179!6.49e-09!15;UBERON:0000463!6.49e-09!15;UBERON:0002420!4.78e-07!9;UBERON:0007245!4.78e-07!9;UBERON:0010009!4.78e-07!9;UBERON:0010011!4.78e-07!9;UBERON:0000454!4.78e-07!9;UBERON:0009663!5.31e-07!7;UBERON:0001872!6.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.46e-15;53!UBERON:0002616;2.46e-15;53!UBERON:0003528;5.17e-15;34!UBERON:0002020;5.17e-15;34!UBERON:0002780;1.40e-14;41!UBERON:0001890;1.40e-14;41!UBERON:0000178;6.81e-14;15!UBERON:0000179;6.81e-14;15!UBERON:0000463;6.81e-14;15!UBERON:0001893;3.35e-13;34!UBERON:0000125;4.44e-13;9!UBERON:0002308;4.44e-13;9!UBERON:0002298;3.09e-12;6!UBERON:0002791;5.85e-12;32!UBERON:0002619;4.55e-11;22!UBERON:0001875;1.23e-10;2!UBERON:0006514;1.23e-10;2!UBERON:0005162;1.45e-10;2!UBERON:0000122;1.45e-10;2!UBERON:0002148;2.85e-10;2!UBERON:0006331;2.85e-10;2!UBERON:0009662;2.85e-10;2!UBERON:0000956;1.20e-09;25!UBERON:0000203;1.20e-09;25!UBERON:0001869;1.72e-09;32!UBERON:0001950;1.95e-09;20!UBERON:0002420;1.38e-08;9!UBERON:0007245;1.38e-08;9!UBERON:0010009;1.38e-08;9!UBERON:0010011;1.38e-08;9!UBERON:0000454;1.38e-08;9!UBERON:0004732;1.51e-08;13!UBERON:0000955;1.96e-07;68!UBERON:0000988;4.10e-07;3!UBERON:0001896;9.05e-07;3!UBERON:0000412;9.05e-07;3!UBERON:0001778;9.05e-07;3!UBERON:0001992;9.05e-07;3!UBERON:0001775;9.05e-07;3!UBERON:0005290;9.05e-07;3!UBERON:0009663;9.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,2.68e-23,82;UBERON:0007284,2.68e-23,82;UBERON:0000073,8.41e-23,53;UBERON:0002616,8.41e-23,53;UBERON:0002346,5.61e-22,86;UBERON:0003056,8.56e-22,61;UBERON:0001049,2.22e-21,56;UBERON:0005068,2.22e-21,56;UBERON:0006241,2.22e-21,56;UBERON:0007135,2.22e-21,56;UBERON:0010371,6.33e-21,104;UBERON:0003528,6.29e-19,34;UBERON:0002020,6.29e-19,34;UBERON:0007023,7.92e-19,114;UBERON:0000955,8.89e-19,68;UBERON:0006238,8.89e-19,68;UBERON:0002780,6.25e-18,41;UBERON:0001890,6.25e-18,41;UBERON:0003080,6.25e-18,41;UBERON:0006240,6.25e-18,41;UBERON:0010314,8.45e-17,132;UBERON:0001893,4.99e-16,34;UBERON:0001017,3.82e-15,81;UBERON:0001016,6.20e-15,89;UBERON:0002791,3.07e-14,32;UBERON:0000178,1.07e-13,15;UBERON:0000179,1.07e-13,15;UBERON:0000463,1.07e-13,15;UBERON:0000125,4.46e-13,9;UBERON:0002308,4.46e-13,9;UBERON:0002298,2.88e-12,6;UBERON:0001869,1.40e-11,32;UBERON:0004121,1.81e-11,171;UBERON:0000924,1.81e-11,171;UBERON:0006601,1.81e-11,171;UBERON:0002619,6.36e-11,22;UBERON:0001875,1.33e-10,2;UBERON:0006514,1.33e-10,2;UBERON:0005162,1.39e-10,2;UBERON:0000122,1.39e-10,2;UBERON:0002148,2.67e-10,2;UBERON:0006331,2.67e-10,2;UBERON:0009662,2.67e-10,2;UBERON:0000956,1.60e-09,25;UBERON:0000203,1.60e-09,25;UBERON:0001950,2.71e-09,20;UBERON:0004732,1.41e-08,13;UBERON:0002420,1.48e-08,9;UBERON:0007245,1.48e-08,9;UBERON:0010009,1.48e-08,9;UBERON:0010011,1.48e-08,9;UBERON:0000454,1.48e-08,9;UBERON:0000966,2.39e-07,6;UBERON:0005388,2.39e-07,6;UBERON:0001802,2.39e-07,6;UBERON:0000988,3.93e-07,3;UBERON:0001778,4.86e-07,3;UBERON:0001775,4.86e-07,3;UBERON:0000412,7.60e-07,3;UBERON:0001992,7.60e-07,3;UBERON:0001896,8.82e-07,3;UBERON:0005290,8.82e-07,3;UBERON:0010096,8.82e-07,3;UBERON:0009663,9.51e-07,7 | |||
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| ||
|short_description=p6@COL9A2 | |||
}} | }} |
Latest revision as of 01:08, 18 September 2015
Short description: | p6@COL9A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COL9A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000490132_5end |
EntrezGene: | COL9A2 |
HGNC: | 2218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 8.28e-11 | 2 |
ciliated cell | 4.86e-07 | 3 |
ciliated epithelial cell | 4.86e-07 | 3 |
multi-ciliated epithelial cell | 4.86e-07 | 3 |
non-pigmented ciliary epithelial cell | 4.86e-07 | 3 |
blood cell | 5.55e-07 | 11 |
hair follicle dermal papilla cell | 7.60e-07 | 3 |
stem cell of epidermis | 7.60e-07 | 3 |