FFCP PHASE1:Hg19::chr19:40503013..40503044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339327 | |EntrezGene=339327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28671 | |HGNC=28671 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UE3,B3KVL3 | |UniProt=Q86UE3,B3KVL3 | ||
|association_with_transcript=70bp_to_ENST00000347077,NM_178544,uc002oms.2,uc002omt.2_5end | |association_with_transcript=70bp_to_ENST00000347077,NM_178544,uc002oms.2,uc002omt.2_5end | ||
|cluster_id=chr19:40503013..40503044,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_ZNF546_5end | |description=CAGE_peak_3_at_ZNF546_5end | ||
|id=chr19:40503013..40503044,+ | |id=chr19:40503013..40503044,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.88e-08!23 | |ontology_enrichment_celltype=CL:0002620!2.88e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.42e-17;23!CL:0002551;1.23e-08;6!CL:0001014;2.40e-08;2!CL:0001016;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.33e-17,23;CL:0002551,1.37e-08,6;CL:0001014,2.42e-08,2;CL:0001016,2.42e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.03e-11;3!UBERON:0010122;2.69e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;2.69e-07;2!DOID:1907;2.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,2.03e-07,2;DOID:1907,2.03e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000153!7.10e-09!129;UBERON:0007811!7.10e-09!129;UBERON:0000033!4.29e-08!123;UBERON:0001049!1.43e-07!57;UBERON:0005068!1.43e-07!57;UBERON:0006241!1.43e-07!57;UBERON:0007135!1.43e-07!57;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0003075!2.47e-07!86;UBERON:0007284!2.47e-07!86;UBERON:0002346!4.59e-07!90;UBERON:0002616!6.61e-07!59 | |ontology_enrichment_uberon=UBERON:0000153!7.10e-09!129;UBERON:0007811!7.10e-09!129;UBERON:0000033!4.29e-08!123;UBERON:0001049!1.43e-07!57;UBERON:0005068!1.43e-07!57;UBERON:0006241!1.43e-07!57;UBERON:0007135!1.43e-07!57;UBERON:0000955!1.88e-07!69;UBERON:0006238!1.88e-07!69;UBERON:0003075!2.47e-07!86;UBERON:0007284!2.47e-07!86;UBERON:0002346!4.59e-07!90;UBERON:0002616!6.61e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;4.03e-10;3!UBERON:0005382;4.03e-10;3!UBERON:0000369;1.08e-07;4!UBERON:0002435;1.08e-07;4!UBERON:0000204;1.08e-07;4!UBERON:0001873;2.69e-07;2!UBERON:0002097;4.54e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,2.83e-10,3;UBERON:0005382,2.83e-10,3;UBERON:0002097,3.02e-10,41;UBERON:0002199,7.92e-09,46;UBERON:0002416,7.92e-09,46;UBERON:0000369,8.30e-08,4;UBERON:0002435,8.30e-08,4;UBERON:0000204,8.30e-08,4;UBERON:0010082,8.30e-08,4;UBERON:0001873,2.09e-07,2;UBERON:0010122,2.09e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0.247532705920093,0,0,1.20538905604795,0,0,0.492484232307152,0,0,0,0.547497700291537,0.502170558379211,0.534893840235659,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0.257575567634187,0,0.755751887377619,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.328875809207352,0,0,0,0.267540828089713,0,0.453237370790265,0.383220493601921,0,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,1.0843174571537,1.00267582127178,0,0,0.486634870302636,0.567208902984407,0,0.175669571386252,4.38779902917337,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,1.32409180813219,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.538842688278752,0.163461903113459,0.151357427644931,0,0,1.24864030732128,0.570471821544449,0,1.05691048779388,1.13311061057692,1.54495887372473,0.408308342509787,0.368502951935304,0.309977343527296,0,0.494533858557114,0,0,0.505008341862199,0.750711119231785,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,0.453728732640084,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.515262646192195,1.54584324027377,0.18611685633159,1.18143432568886,0.487185025805993,1.26216887122057,0.0920498986422993,0.484938170456436,2.13005755509969,1.10827308050404,0.508681776931463,0.193260853163297,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,1.44375896333917,0.118306800039844,0.674338760312407,0.964044119533928,0.55146986366197,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0.514703430895577,0.219500570817251,0,0,0.277765335475589,0,2.07986957055916,0,0.811512834825538,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0.492663237895943,0,1.03664057770386,0.576479813667846,1.38866676769018,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.448524337381443,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0.399891964728228,0,0,2.10833939483032,0.479249710983165,0,0,0.723906533337896,0,0.179060963239896,0.336255431980582,0.591092280605782,0.646882724578552,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0,0.347534457872331,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,0,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0.462629081407967,0,0.328508624055237,0.519254429183621,0.697262270759755,0,0.200506470303285,0.0920809889358963,0.229628896329213,1.0925470080403,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.657779629937804,0.784306353074702,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.614014698904518,0.689182862422653,0.644521469209642,0.290033387828457,0.681813019328807,0,0,0,0.510450849978337,0.4046311234222,0.464845549297286,1.25924938732256,0,0,0,0,0.37064843820784,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.818999468447914,0.141405431953713,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0.563391205064483,0.286822704408103,0,0,1.06428319221179,0,0.987884678879706,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0.371606350251437,0,0.284567373393656,0.159426272728822,0.59873811429845,0.191505370132367,0.423347165447766,0.973865820823666,0.561594356226918,0,0.626719583092093,0,0.338583555603207,0.963528450622197,0.201799707191048,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0.270455678475983,0.66614393599564,0,0,0.586032717087576,0.242721043499027,0.111443384277478,0.284136146806413,0.23874448473769,0.593929361665277,0.614321404198464,0.994147647766298,0.562677665642051,0,0.988823245360557,0.211125408127993,0,0.276283915531148,0.503865495708552,1.02268682502155,0.492339221844278,0.311039587661807,0,0.179021174675609,0,0.197286811273867,2.3948309234694,0,1.93866549219044,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0,0,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| ||
|short_description=p3@ZNF546 | |short_description=p3@ZNF546 | ||
}} | }} |
Latest revision as of 00:55, 18 September 2015
Short description: | p3@ZNF546 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF546_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 70bp_to_ENST00000347077, NM_178544, uc002oms.2, uc002omt.2_5end |
EntrezGene: | ZNF546 |
HGNC: | 28671 |
UniProt: | Q86UE3B3KVL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.33e-17 | 23 |
fibroblast of dermis | 1.37e-08 | 6 |
CD1a-positive Langerhans cell | 2.42e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.42e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 2.83e-10 | 3 |
dorsal striatum | 2.83e-10 | 3 |
skin of body | 3.02e-10 | 41 |
integument | 7.92e-09 | 46 |
integumental system | 7.92e-09 | 46 |
corpus striatum | 8.30e-08 | 4 |
striatum | 8.30e-08 | 4 |
ventral part of telencephalon | 8.30e-08 | 4 |
future corpus striatum | 8.30e-08 | 4 |
caudate nucleus | 2.09e-07 | 2 |
future caudate nucleus | 2.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 2.03e-07 | 2 |
malignant fibroxanthoma | 2.03e-07 | 2 |