FFCP PHASE1:Hg19::chr16:810882..810893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |EntrezGene=10232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |HGNC=7371 | ||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |UniProt=Q13421 | ||
|association_with_transcript=115bp_to_uc010brd.1_5end | |association_with_transcript=115bp_to_uc010brd.1_5end | ||
|cluster_id=chr16:810882..810893,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_7_at_MSLN_5end | |description=CAGE_peak_7_at_MSLN_5end | ||
|id=chr16:810882..810893,+ | |id=chr16:810882..810893,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.00e-23!254;CL:0000077!4.59e-12!19;CL:0000076!3.40e-08!62 | |ontology_enrichment_celltype=CL:0000066!2.00e-23!254;CL:0000077!4.59e-12!19;CL:0000076!3.40e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.97e-13;19!CL:0002577;3.31e-13;3!CL:0000575;9.21e-10;2!CL:0002537;1.40e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.29e-18,253;CL:0002577,2.34e-13,3;CL:0000349,2.70e-13,19;CL:0000575,1.01e-09,2;CL:0002537,1.40e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.28e-17;29 | |||
|ontology_enrichment_disease=DOID:305!1.72e-15!106;DOID:0050687!1.47e-10!143;DOID:162!3.71e-07!235;DOID:14566!9.51e-07!239 | |ontology_enrichment_disease=DOID:305!1.72e-15!106;DOID:0050687!1.47e-10!143;DOID:162!3.71e-07!235;DOID:14566!9.51e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.09e-09;2!DOID:4929;2.80e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.72e-16,106;DOID:0050687,1.89e-10,143;DOID:3493,9.64e-10,2;DOID:4929,4.51e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.77e-16!9;UBERON:0008947!6.85e-15!38;UBERON:0003258!6.85e-15!38;UBERON:0005631!3.15e-14!14;UBERON:0000158!3.15e-14!14;UBERON:0000065!3.53e-13!53;UBERON:0001004!1.00e-11!72;UBERON:0004119!9.25e-11!169;UBERON:0000925!9.25e-11!169;UBERON:0006595!9.25e-11!169;UBERON:0000072!6.76e-10!46;UBERON:0000077!1.23e-09!130;UBERON:0000064!1.24e-09!219;UBERON:0001557!4.25e-09!19;UBERON:0003124!5.53e-09!7;UBERON:0000464!2.37e-08!104;UBERON:0002294!2.77e-08!7;UBERON:0001173!2.77e-08!7;UBERON:0004912!2.77e-08!7;UBERON:0001041!3.95e-08!98;UBERON:0003133!4.16e-08!48;UBERON:0001007!6.27e-08!155;UBERON:0001555!6.27e-08!155;UBERON:0007026!6.27e-08!155;UBERON:0001987!6.60e-08!4;UBERON:0004340!6.60e-08!4;UBERON:0000466!2.70e-07!126;UBERON:0000478!4.38e-07!24;UBERON:0001048!5.85e-07!168;UBERON:0000305!6.11e-07!7;UBERON:0004921!9.17e-07!129;UBERON:0004185!9.17e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!7.77e-16!9;UBERON:0008947!6.85e-15!38;UBERON:0003258!6.85e-15!38;UBERON:0005631!3.15e-14!14;UBERON:0000158!3.15e-14!14;UBERON:0000065!3.53e-13!53;UBERON:0001004!1.00e-11!72;UBERON:0004119!9.25e-11!169;UBERON:0000925!9.25e-11!169;UBERON:0006595!9.25e-11!169;UBERON:0000072!6.76e-10!46;UBERON:0000077!1.23e-09!130;UBERON:0000064!1.24e-09!219;UBERON:0001557!4.25e-09!19;UBERON:0003124!5.53e-09!7;UBERON:0000464!2.37e-08!104;UBERON:0002294!2.77e-08!7;UBERON:0001173!2.77e-08!7;UBERON:0004912!2.77e-08!7;UBERON:0001041!3.95e-08!98;UBERON:0003133!4.16e-08!48;UBERON:0001007!6.27e-08!155;UBERON:0001555!6.27e-08!155;UBERON:0007026!6.27e-08!155;UBERON:0001987!6.60e-08!4;UBERON:0004340!6.60e-08!4;UBERON:0000466!2.70e-07!126;UBERON:0000478!4.38e-07!24;UBERON:0001048!5.85e-07!168;UBERON:0000305!6.11e-07!7;UBERON:0004921!9.17e-07!129;UBERON:0004185!9.17e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.36e-34;9!UBERON:0001557;7.36e-34;9!UBERON:0000072;7.39e-16;37!UBERON:0000065;6.86e-15;44!UBERON:0005631;8.43e-11;10!UBERON:0000158;8.43e-11;10!UBERON:0000305;3.10e-10;7!UBERON:0000478;3.33e-10;24!UBERON:0001987;5.12e-10;4!UBERON:0001004;9.81e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.74e-34,9;UBERON:0008947,7.99e-20,38;UBERON:0003258,7.99e-20,38;UBERON:0005631,1.53e-18,14;UBERON:0000158,1.53e-18,14;UBERON:0001557,1.73e-15,19;UBERON:0000072,2.81e-13,47;UBERON:0000065,5.97e-13,54;UBERON:0001004,2.19e-11,74;UBERON:0004119,1.17e-10,160;UBERON:0000925,1.17e-10,160;UBERON:0006595,1.17e-10,160;UBERON:0001041,1.32e-10,87;UBERON:0000478,3.10e-10,24;UBERON:0000305,3.30e-10,7;UBERON:0001987,3.96e-10,4;UBERON:0004340,3.96e-10,4;UBERON:0003124,5.63e-10,7;UBERON:0004871,6.23e-09,8;UBERON:0001007,5.03e-08,145;UBERON:0001555,5.03e-08,145;UBERON:0007026,5.03e-08,145;UBERON:0001048,6.67e-07,160 | |||
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| ||
|short_description=p7@MSLN | |short_description=p7@MSLN | ||
}} | }} |
Latest revision as of 00:30, 18 September 2015
Short description: | p7@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 115bp_to_uc010brd.1_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.29e-18 | 253 |
placental epithelial cell | 2.34e-13 | 3 |
extraembryonic cell | 2.70e-13 | 19 |
corneal epithelial cell | 1.01e-09 | 2 |
amnion mesenchymal stem cell | 1.40e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.74e-34 | 9 |
respiratory primordium | 7.99e-20 | 38 |
endoderm of foregut | 7.99e-20 | 38 |
extraembryonic membrane | 1.53e-18 | 14 |
membranous layer | 1.53e-18 | 14 |
upper respiratory tract | 1.73e-15 | 19 |
segment of respiratory tract | 2.81e-13 | 47 |
respiratory tract | 5.97e-13 | 54 |
respiratory system | 2.19e-11 | 74 |
endoderm-derived structure | 1.17e-10 | 160 |
endoderm | 1.17e-10 | 160 |
presumptive endoderm | 1.17e-10 | 160 |
foregut | 1.32e-10 | 87 |
extraembryonic structure | 3.10e-10 | 24 |
amnion | 3.30e-10 | 7 |
placenta | 3.96e-10 | 4 |
allantois | 3.96e-10 | 4 |
chorion | 5.63e-10 | 7 |
somatic layer of lateral plate mesoderm | 6.23e-09 | 8 |
digestive system | 5.03e-08 | 145 |
digestive tract | 5.03e-08 | 145 |
primitive gut | 5.03e-08 | 145 |
primordium | 6.67e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.72e-16 | 106 |
cell type cancer | 1.89e-10 | 143 |
signet ring cell adenocarcinoma | 9.64e-10 | 2 |
tubular adenocarcinoma | 4.51e-09 | 2 |