FFCP PHASE1:Hg19::chr13:76335059..76335079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLH4,Q8WWI1 | |UniProt=E9PLH4,Q8WWI1 | ||
|association_with_transcript=262bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | |association_with_transcript=262bp_to_ENST00000465261,NM_015842,uc001vjv.2_5end | ||
|cluster_id=chr13:76335059..76335079,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_24_at_LMO7_5end | |description=CAGE_peak_24_at_LMO7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.11e-10;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.11e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.11e-14;1!UBERON:0004161;2.70e-11;11!UBERON:0009497;1.20e-09;13!UBERON:0003104;5.46e-07;31 | |ontology_enrichment_development_v019=UBERON:0001045;2.11e-14;1!UBERON:0004161;2.70e-11;11!UBERON:0009497;1.20e-09;13!UBERON:0003104;5.46e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.88e-11!32;UBERON:0001893!2.06e-11!34;UBERON:0001007!5.20e-11!155;UBERON:0001555!5.20e-11!155;UBERON:0007026!5.20e-11!155;UBERON:0002791!6.35e-11!33;UBERON:0002619!9.82e-11!22;UBERON:0004119!2.08e-10!169;UBERON:0000925!2.08e-10!169;UBERON:0006595!2.08e-10!169;UBERON:0000956!4.44e-10!25;UBERON:0000203!4.44e-10!25;UBERON:0002020!1.69e-09!34;UBERON:0003528!1.69e-09!34;UBERON:0002780!2.03e-09!41;UBERON:0001890!2.03e-09!41;UBERON:0006240!2.03e-09!41;UBERON:0001950!4.23e-09!20;UBERON:0003080!4.80e-09!42;UBERON:0004921!5.35e-09!129;UBERON:0004185!5.35e-09!129;UBERON:0000481!1.49e-07!347;UBERON:0001046!2.64e-07!19 | |ontology_enrichment_uberon=UBERON:0001869!1.88e-11!32;UBERON:0001893!2.06e-11!34;UBERON:0001007!5.20e-11!155;UBERON:0001555!5.20e-11!155;UBERON:0007026!5.20e-11!155;UBERON:0002791!6.35e-11!33;UBERON:0002619!9.82e-11!22;UBERON:0004119!2.08e-10!169;UBERON:0000925!2.08e-10!169;UBERON:0006595!2.08e-10!169;UBERON:0000956!4.44e-10!25;UBERON:0000203!4.44e-10!25;UBERON:0002020!1.69e-09!34;UBERON:0003528!1.69e-09!34;UBERON:0002780!2.03e-09!41;UBERON:0001890!2.03e-09!41;UBERON:0006240!2.03e-09!41;UBERON:0001950!4.23e-09!20;UBERON:0003080!4.80e-09!42;UBERON:0004921!5.35e-09!129;UBERON:0004185!5.35e-09!129;UBERON:0000481!1.49e-07!347;UBERON:0001046!2.64e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.71e-59;17!UBERON:0005409;5.31e-46;22!UBERON:0000059;4.06e-30;11!UBERON:0004921;1.85e-27;33!UBERON:0002108;4.73e-25;4!UBERON:0004907;3.01e-24;5!UBERON:0001154;2.11e-14;1!UBERON:0001153;2.11e-14;1!UBERON:0009854;2.11e-14;1!UBERON:0001052;3.49e-14;4!UBERON:0001155;5.52e-14;9!UBERON:0001007;3.25e-13;81!UBERON:0001555;7.45e-11;54!UBERON:0002107;9.17e-07;19!UBERON:0006925;9.17e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000160;5.71e-59;17!UBERON:0005409;5.31e-46;22!UBERON:0000059;4.06e-30;11!UBERON:0004921;1.85e-27;33!UBERON:0002108;4.73e-25;4!UBERON:0004907;3.01e-24;5!UBERON:0001154;2.11e-14;1!UBERON:0001153;2.11e-14;1!UBERON:0009854;2.11e-14;1!UBERON:0001052;3.49e-14;4!UBERON:0001155;5.52e-14;9!UBERON:0001007;3.25e-13;81!UBERON:0001555;7.45e-11;54!UBERON:0002107;9.17e-07;19!UBERON:0006925;9.17e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.08e-59,17;UBERON:0005409,1.04e-40,25;UBERON:0000059,3.00e-30,11;UBERON:0002108,4.93e-25,4;UBERON:0004907,2.10e-24,5;UBERON:0004921,1.86e-17,118;UBERON:0001154,1.61e-14,1;UBERON:0001153,1.61e-14,1;UBERON:0001045,1.61e-14,1;UBERON:0001052,2.95e-14,4;UBERON:0001155,4.95e-14,9;UBERON:0001007,5.87e-14,145;UBERON:0001555,5.87e-14,145;UBERON:0007026,5.87e-14,145;UBERON:0004119,1.62e-12,160;UBERON:0000925,1.62e-12,160;UBERON:0006595,1.62e-12,160;UBERON:0001046,1.91e-11,19;UBERON:0011216,6.07e-10,223;UBERON:0009854,2.26e-09,23;UBERON:0009856,2.57e-08,26;UBERON:0002107,9.35e-07,19;UBERON:0006925,9.35e-07,19;UBERON:0008836,9.35e-07,19 | |||
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|short_description=p24@LMO7 | |short_description=p24@LMO7 | ||
}} | }} |
Latest revision as of 00:13, 18 September 2015
Short description: | p24@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_LMO7_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 262bp_to_ENST00000465261, NM_015842, uc001vjv.2_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLH4Q8WWI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.18e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.08e-59 | 17 |
gastrointestinal system | 1.04e-40 | 25 |
large intestine | 3.00e-30 | 11 |
small intestine | 4.93e-25 | 4 |
lower digestive tract | 2.10e-24 | 5 |
subdivision of digestive tract | 1.86e-17 | 118 |
vermiform appendix | 1.61e-14 | 1 |
caecum | 1.61e-14 | 1 |
midgut | 1.61e-14 | 1 |
rectum | 2.95e-14 | 4 |
colon | 4.95e-14 | 9 |
digestive system | 5.87e-14 | 145 |
digestive tract | 5.87e-14 | 145 |
primitive gut | 5.87e-14 | 145 |
endoderm-derived structure | 1.62e-12 | 160 |
endoderm | 1.62e-12 | 160 |
presumptive endoderm | 1.62e-12 | 160 |
hindgut | 1.91e-11 | 19 |
organ system subdivision | 6.07e-10 | 223 |
digestive tract diverticulum | 2.26e-09 | 23 |
sac | 2.57e-08 | 26 |
liver | 9.35e-07 | 19 |
digestive gland | 9.35e-07 | 19 |
liver bud | 9.35e-07 | 19 |