FFCP PHASE1:Hg19::chr1:40042013..40042032,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8761 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8557 | |||
|TSSclassifier=strong | |||
|UniProt=Q4VC03 | |||
|association_with_transcript=40bp_to_ENST00000372858_5end | |||
|cluster_id=chr1:40042013..40042032,- | |||
|description=CAGE_peak_19_at_PABPC4_5end | |||
|id=chr1:40042013..40042032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.71e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.26e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.97e-08;1!DOID:3565;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.71e-08,1;DOID:3565,1.71e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.39e-15;2!UBERON:0001630;1.39e-15;2!UBERON:0000341;3.70e-15;2!UBERON:0000989;7.26e-09;1!UBERON:0001389;7.26e-09;1!UBERON:0000026;7.26e-09;1!UBERON:0008784;7.26e-09;1!UBERON:0006058;7.26e-09;1!UBERON:0008811;7.26e-09;1!UBERON:0003663;7.26e-09;1!UBERON:0004256;7.26e-09;1!UBERON:0004708;7.26e-09;1!UBERON:0002101;7.26e-09;1!UBERON:0004709;7.26e-09;1!UBERON:0002529;7.26e-09;1!UBERON:0010538;7.26e-09;1!UBERON:0003661;7.26e-09;1!UBERON:0010890;7.26e-09;1!UBERON:0002471;7.26e-09;1!UBERON:0001383;7.26e-09;1!UBERON:0010758;7.26e-09;1!UBERON:0010707;7.26e-09;1!UBERON:0000978;7.26e-09;1!UBERON:0002103;7.26e-09;1!UBERON:0001665;7.26e-09;1!UBERON:0003823;7.26e-09;1!UBERON:0000154;7.26e-09;1!UBERON:0010709;7.26e-09;1!UBERON:0007195;1.97e-08;1!UBERON:0002426;1.97e-08;1!UBERON:0003831;1.97e-08;1!UBERON:0003898;1.97e-08;1!UBERON:0004830;1.97e-08;1!UBERON:0003830;1.97e-08;1!UBERON:0005175;1.97e-08;1!UBERON:0001774;1.97e-08;1!UBERON:0001103;1.97e-08;1!UBERON:0001134;1.71e-07;16!UBERON:0002036;1.71e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,8.04e-16,2;UBERON:0001630,8.04e-16,2;UBERON:0000341,3.22e-15,2;UBERON:0005418,7.56e-09,1;UBERON:0001389,7.56e-09,1;UBERON:0000026,7.56e-09,1;UBERON:0008784,7.56e-09,1;UBERON:0006058,7.56e-09,1;UBERON:0003663,7.56e-09,1;UBERON:0004256,7.56e-09,1;UBERON:0004708,7.56e-09,1;UBERON:0002101,7.56e-09,1;UBERON:0004709,7.56e-09,1;UBERON:0002529,7.56e-09,1;UBERON:0010538,7.56e-09,1;UBERON:0003661,7.56e-09,1;UBERON:0010890,7.56e-09,1;UBERON:0002471,7.56e-09,1;UBERON:0001383,7.56e-09,1;UBERON:0004357,7.56e-09,1;UBERON:0004347,7.56e-09,1;UBERON:0005420,7.56e-09,1;UBERON:0005732,7.56e-09,1;UBERON:0010758,7.56e-09,1;UBERON:0010707,7.56e-09,1;UBERON:0000978,7.56e-09,1;UBERON:0002103,7.56e-09,1;UBERON:0001665,7.56e-09,1;UBERON:0003823,7.56e-09,1;UBERON:0000154,7.56e-09,1;UBERON:0010709,7.56e-09,1;UBERON:0005733,7.56e-09,1;UBERON:0005730,7.56e-09,1;UBERON:0000989,8.15e-09,1;UBERON:0008811,8.15e-09,1;UBERON:0006258,8.15e-09,1;UBERON:0005876,8.15e-09,1;UBERON:0004874,8.15e-09,1;UBERON:0002426,1.10e-08,1;UBERON:0003831,1.10e-08,1;UBERON:0003898,1.10e-08,1;UBERON:0004830,1.10e-08,1;UBERON:0003830,1.10e-08,1;UBERON:0005175,1.10e-08,1;UBERON:0001774,1.10e-08,1;UBERON:0001103,1.10e-08,1;UBERON:0010084,1.10e-08,1;UBERON:0007195,3.06e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,1.0429658368404,0,1.81619850790011,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,1.13061588384802,0,0,0,0,0,0.33472061276467,0,1.52054421143703,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0.408308342509787,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0.194874010322397,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,1.44375896333917,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,2.80483547606892,0,0,0,0.982827216677626,0,0.441463099414651,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0.576479813667846,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0.410952645100767,0,0.224170287987055,0,0,0.128343036279748,0.508189248444927,0,0,0,0,0,2.99161459204025,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.234282829985426,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.552485933615378,0,0.364182336013434,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0.768760269460425,0,1.11273558941105,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0.962479855263359,0,0.743212700502875,0,0,0.318852545457645,0,0.191505370132367,0,0.649243880549111,0,0.228234679033192,0,0,0,0.1605880751037,0.605399121573143,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0.66614393599564,2.81974010175699,0,0,0.606802608747567,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0,0.333926115068718,0.16480387422676,0,0.19924798825107,0.828851746593443,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.7812832832557,0.174919999992391,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0.448788222048861,0.217294743844016,0.31900115973192,0,1.5991043280559,0,0,0.166211681900156,0,0,0,0.37950746544837,0.158936578980379,0.421996129056054,0,0.141353071433941,0,0,0.176915129006678,0,0,0.247127877893006,0,0,1.60515529459758,0,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0.124252535565433,0,0.135904206073614,0.209205692624666,0.30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| |||
|short_description=p19@PABPC4 | |||
}} |
Latest revision as of 00:00, 18 September 2015
Short description: | p19@PABPC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PABPC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000372858_5end |
EntrezGene: | PABPC4 |
HGNC: | 8557 |
UniProt: | Q4VC03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.71e-08 | 1 |
meningioma | 1.71e-08 | 1 |