FFCP PHASE1:Hg19::chr13:76210300..76210321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMP7 | |UniProt=E9PMP7 | ||
|association_with_transcript=-137bp_to_ENST00000377499,uc001vjt.1_5end | |association_with_transcript=-137bp_to_ENST00000377499,uc001vjt.1_5end | ||
|cluster_id=chr13:76210300..76210321,+ | |||
|coexpression_cluster_id=C1189 | |||
|description=CAGE_peak_19_at_LMO7_5end | |description=CAGE_peak_19_at_LMO7_5end | ||
|id=chr13:76210300..76210321,+ | |id=chr13:76210300..76210321,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.25e-37!180;CL:0000057!6.64e-26!75;CL:0002620!3.49e-11!23;CL:0000680!4.06e-11!57;CL:0000056!4.06e-11!57;CL:0000355!4.06e-11!57;CL:0000048!4.76e-11!430;CL:0000723!2.32e-10!436;CL:0000192!6.73e-10!42;CL:0000514!6.73e-10!42;CL:0000034!1.73e-09!444;CL:0000187!2.78e-09!54;CL:0000144!4.78e-09!625;CL:0000222!1.05e-08!119;CL:0000393!1.14e-08!60;CL:0000211!1.14e-08!60;CL:0002371!1.84e-08!591;CL:0000183!2.15e-08!59;CL:0000359!8.42e-08!32;CL:0002334!2.87e-07!12;CL:0000548!5.07e-07!679;CL:0000004!5.07e-07!679;CL:0000255!5.07e-07!679;CL:0000012!9.19e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.25e-37!180;CL:0000057!6.64e-26!75;CL:0002620!3.49e-11!23;CL:0000680!4.06e-11!57;CL:0000056!4.06e-11!57;CL:0000355!4.06e-11!57;CL:0000048!4.76e-11!430;CL:0000723!2.32e-10!436;CL:0000192!6.73e-10!42;CL:0000514!6.73e-10!42;CL:0000034!1.73e-09!444;CL:0000187!2.78e-09!54;CL:0000144!4.78e-09!625;CL:0000222!1.05e-08!119;CL:0000393!1.14e-08!60;CL:0000211!1.14e-08!60;CL:0002371!1.84e-08!591;CL:0000183!2.15e-08!59;CL:0000359!8.42e-08!32;CL:0002334!2.87e-07!12;CL:0000548!5.07e-07!679;CL:0000004!5.07e-07!679;CL:0000255!5.07e-07!679;CL:0000012!9.19e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.76e-14;23!CL:0000056;1.28e-09;4!CL:0002579;2.87e-08;3!CL:0000057;4.09e-08;73!CL:0002580;4.82e-08;3!CL:0000515;2.45e-07;3!CL:0002615;3.37e-07;3!CL:0002622;5.21e-07;3!CL:0002334;7.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.14e-21,76;CL:0002620,5.20e-14,23;CL:0000048,2.72e-10,427;CL:0000723,6.56e-10,433;CL:0000515,1.07e-09,4;CL:0000034,2.03e-09,441;CL:0002579,3.11e-08,3;CL:0002580,4.64e-08,3;CL:0002320,1.26e-07,361;CL:0000134,1.42e-07,354;CL:0002615,2.98e-07,3;CL:0002334,7.53e-07,12;CL:0002622,7.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;1.28e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.73e-10!63;UBERON:0001015!1.73e-10!63;UBERON:0000383!1.73e-10!63;UBERON:0001134!1.77e-10!61;UBERON:0002036!1.77e-10!61;UBERON:0003082!1.77e-10!61;UBERON:0000914!2.12e-10!83;UBERON:0002329!2.12e-10!83;UBERON:0003077!2.12e-10!83;UBERON:0003059!2.12e-10!83;UBERON:0007282!2.12e-10!83;UBERON:0009618!2.12e-10!83;UBERON:0007285!2.12e-10!83;UBERON:0004872!2.17e-09!84;UBERON:0004290!4.03e-09!70;UBERON:0003102!2.02e-08!95;UBERON:0000486!6.60e-08!82;UBERON:0003688!2.83e-07!6;UBERON:0002358!2.83e-07!6;UBERON:0003684!2.83e-07!6;UBERON:0001178!2.83e-07!6;UBERON:0004535!3.80e-07!110;UBERON:0002199!8.40e-07!45;UBERON:0002416!8.40e-07!45 | |ontology_enrichment_uberon=UBERON:0002385!1.73e-10!63;UBERON:0001015!1.73e-10!63;UBERON:0000383!1.73e-10!63;UBERON:0001134!1.77e-10!61;UBERON:0002036!1.77e-10!61;UBERON:0003082!1.77e-10!61;UBERON:0000914!2.12e-10!83;UBERON:0002329!2.12e-10!83;UBERON:0003077!2.12e-10!83;UBERON:0003059!2.12e-10!83;UBERON:0007282!2.12e-10!83;UBERON:0009618!2.12e-10!83;UBERON:0007285!2.12e-10!83;UBERON:0004872!2.17e-09!84;UBERON:0004290!4.03e-09!70;UBERON:0003102!2.02e-08!95;UBERON:0000486!6.60e-08!82;UBERON:0003688!2.83e-07!6;UBERON:0002358!2.83e-07!6;UBERON:0003684!2.83e-07!6;UBERON:0001178!2.83e-07!6;UBERON:0004535!3.80e-07!110;UBERON:0002199!8.40e-07!45;UBERON:0002416!8.40e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.90e-14;6!UBERON:0002358;8.90e-14;6!UBERON:0003684;8.90e-14;6!UBERON:0001178;8.90e-14;6!UBERON:0004457;9.73e-12;9!UBERON:0000042;9.73e-12;9!UBERON:0002097;3.31e-08;41!UBERON:0002199;2.50e-07;46!UBERON:0002416;2.50e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.43e-14,6;UBERON:0002358,8.43e-14,6;UBERON:0003684,8.43e-14,6;UBERON:0001178,8.43e-14,6;UBERON:0002097,1.44e-11,41;UBERON:0002199,7.65e-10,46;UBERON:0002416,7.65e-10,46;UBERON:0004457,1.29e-08,12;UBERON:0000042,1.29e-08,12;UBERON:0003102,2.44e-08,99;UBERON:0002384,3.67e-08,371 | |||
|phase1_expression=1.2717486548939,1.49870366723688,1.9733616573436,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.612002073732759,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,2.53007406669196,3.50936537445123,1.44846518960824,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0.22452937262617,0,1.53316637465883,0,0.183201743930407,0,0,0,8.94549513051573,4.30543739659571,3.44263870114369,3.15520282823695,0.354668382198357,5.60677600142307,1.06748995729705,0.49333509683432,1.55605517699883,0.269421344139376,0.326923806226917,0.454072282934794,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0,2.37600571456411,2.47266929278557,0,0,0.168336113954066,0,0.277064115484183,2.63386572528503,3.98434134538726,0.901428353439581,0.907457465280168,7.35497506324334,2.56268866582281,1.90738711043606,0.900273288253207,0.721367704669072,2.83404594050192,2.79175284497385,3.54430297706659,2.43592512902997,1.51460264546469,2.30124746605748,2.7479829659198,2.4850671476163,2.31729825923573,1.01736355386293,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,2.3218396401599,1.44375896333917,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,0,0.22001485746285,1.68053230485111,0,0,0.797814349754612,0,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,5.75099653179798,1.14861935834114,4.27910715122155,2.60606352001643,2.05476322550383,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,1.24782516918484,1.42743191037729,2.36553622550902,3.16281820480326,3.61135319673263,6.82222512167955,0,1.99267679560631,2.58116835958384,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,2.48107807818777,15.8065832486704,2.52594084989766,2.43464383585832,4.09365799253363,5.95159508231348,0,0.154209693802656,0.887808626565635,0.246381468041427,0,0.464841513839837,0,0.200506470303285,0,2.18147451512753,1.63882051206045,1.18011973463482,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,3.21367859688319,0.096670718292122,0,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0.929691098594572,6.61105928344344,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,1.71749864090389,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0.539617372749944,0.54907405947211,0.117812402345686,2.62837226045311,0,0,0,0,0,2.04749867111979,0.565621727814851,2.26016233240486,0,1.99031692572366,1.75380354101505,1.73632660280006,0,0,0.30982349809975,0.563391205064483,1.14729081763241,0.687743287091848,0.7133421029625,0,0.633322905892992,1.97576935775941,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,1.255234155748,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0.13480708770837,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.947015026375446,1.25783950876288,1.77962244319307,0.228840068396924,0.453692771289717,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0.181848659202559,0,0.464033759878494,1.19428766609585,1.20008329398946,0.686791410365586,0.673498977531838,3.78554694685953,0,1.07220795687463,0,0.453411851024545,1.62065732026684,0,0.71635536432595,0,0.219284049578707,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,0.705351887381368,1.531227386766,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.231051332300676,3.05105676373734,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0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| ||
|short_description=p19@LMO7 | |short_description=p19@LMO7 | ||
}} | }} |
Latest revision as of 23:58, 17 September 2015
Short description: | p19@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LMO7_5end |
Coexpression cluster: | C1189_Preadipocyte_Fibroblast_Ewing_mesodermal_Adipocyte_Smooth_osteoclastoma |
Association with transcript: | -137bp_to_ENST00000377499, uc001vjt.1_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PMP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.14e-21 | 76 |
skin fibroblast | 5.20e-14 | 23 |
multi fate stem cell | 2.72e-10 | 427 |
somatic stem cell | 6.56e-10 | 433 |
skeletal muscle myoblast | 1.07e-09 | 4 |
stem cell | 2.03e-09 | 441 |
omentum preadipocyte | 3.11e-08 | 3 |
preadipocyte of the breast | 4.64e-08 | 3 |
connective tissue cell | 1.26e-07 | 361 |
mesenchymal cell | 1.42e-07 | 354 |
adipocyte of omentum tissue | 2.98e-07 | 3 |
preadipocyte | 7.53e-07 | 12 |
prostate stromal cell | 7.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.43e-14 | 6 |
peritoneum | 8.43e-14 | 6 |
abdominal cavity | 8.43e-14 | 6 |
visceral peritoneum | 8.43e-14 | 6 |
skin of body | 1.44e-11 | 41 |
integument | 7.65e-10 | 46 |
integumental system | 7.65e-10 | 46 |
cavity lining | 1.29e-08 | 12 |
serous membrane | 1.29e-08 | 12 |
surface structure | 2.44e-08 | 99 |
connective tissue | 3.67e-08 | 371 |