FFCP PHASE1:Hg19::chr12:26783618..26783634,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:26783618..26783634,- to FFCP PHASE1:Hg19::chr12:26783618..26783634,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3709 | |EntrezGene=3709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6181 | |HGNC=6181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000545902_5end | |||
|cluster_id=chr12:26783618..26783634,- | |||
|description=CAGE_peak_8_at_ITPR2_5end | |||
|id=chr12:26783618..26783634,- | |||
|ontology_enrichment_celltype=CL:0000222!1.31e-09!119;CL:0000220!6.58e-09!246;CL:0002321!1.02e-08!248;CL:0002594!1.03e-07!4;CL:0005020!1.96e-07!6;CL:0002138!1.96e-07!6;CL:0005022!1.96e-07!6;CL:0000183!8.33e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.25e-17;3!CL:0000067;1.25e-17;3!CL:0005012;1.25e-17;3!CL:0002304;1.25e-17;3!CL:0002594;5.15e-13;4!CL:0002588;6.05e-13;2!CL:0002569;4.09e-09;6!CL:0002138;7.70e-09;6!CL:0002139;1.13e-07;24!CL:0000342;2.58e-07;1!CL:0002565;2.58e-07;1!CL:0000349;2.89e-07;19!CL:0002568;4.64e-07;1!CL:0000319;4.64e-07;1!CL:0000306;6.96e-07;4!CL:0002222;6.96e-07;4!CL:0002224;6.96e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.02e-17,3;CL:0000067,1.02e-17,3;CL:0005012,1.02e-17,3;CL:0002304,1.02e-17,3;CL:0002594,3.20e-13,4;CL:0002588,5.56e-13,2;CL:0002569,3.42e-09,6;CL:0005020,1.05e-08,6;CL:0002138,1.05e-08,6;CL:0005022,1.05e-08,6;CL:0000222,2.61e-08,121;CL:0000359,7.91e-08,32;CL:0002139,1.33e-07,24;CL:0000349,2.47e-07,19;CL:0000342,2.50e-07,1;CL:0002565,2.50e-07,1;CL:0002568,3.78e-07,1;CL:0000319,4.78e-07,1;CL:0000306,6.77e-07,4;CL:0002222,6.77e-07,4;CL:0002224,6.77e-07,4 | |||
|ontology_enrichment_development_v019=CL:0005022;7.70e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;4.64e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.79e-10!11;UBERON:0002049!8.06e-10!79;UBERON:0007798!8.06e-10!79;UBERON:0002066!1.71e-09!5;UBERON:0000488!2.72e-08!4;UBERON:0000055!3.95e-08!69;UBERON:0004535!6.38e-08!110;UBERON:0001310!1.03e-07!4;UBERON:0000490!1.12e-07!138;UBERON:0003914!1.72e-07!118;UBERON:0001009!1.74e-07!113;UBERON:0001638!5.07e-07!9;UBERON:0003920!5.07e-07!9;UBERON:0004582!5.07e-07!9;UBERON:0000970!7.44e-07!20;UBERON:0000020!9.70e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.25e-23;4!UBERON:0010260;4.57e-22;9!UBERON:0007625;1.61e-18;11!UBERON:0001778;1.25e-17;3!UBERON:0001775;1.25e-17;3!UBERON:0002203;1.54e-15;6!UBERON:0001768;1.54e-15;6!UBERON:0002200;1.54e-15;6!UBERON:0002049;1.18e-14;75!UBERON:0007798;1.18e-14;75!UBERON:0001801;1.98e-14;14!UBERON:0001310;5.15e-13;4!UBERON:0002066;5.53e-11;5!UBERON:0000019;1.78e-10;19!UBERON:0000047;1.78e-10;19!UBERON:0004088;1.78e-10;19!UBERON:0010230;1.78e-10;19!UBERON:0001638;2.67e-10;9!UBERON:0003920;2.67e-10;9!UBERON:0004582;2.67e-10;9!UBERON:0000970;6.39e-10;20!UBERON:0000055;8.70e-10;65!UBERON:0002104;2.03e-09;21!UBERON:0001456;2.03e-09;21!UBERON:0003422;4.09e-09;6!UBERON:0000020;1.51e-08;23!UBERON:0006876;1.60e-08;11!UBERON:0001032;3.64e-08;24!UBERON:0004456;3.64e-08;24!UBERON:0007500;3.82e-08;56!UBERON:0001981;3.82e-08;56!UBERON:0004537;3.82e-08;56!UBERON:0003104;7.12e-08;7!UBERON:0009142;7.12e-08;7!UBERON:0002506;2.58e-07;1!UBERON:0001769;2.58e-07;1!UBERON:0001009;3.74e-07;112!UBERON:0010077;6.96e-07;4!UBERON:0005389;6.96e-07;4!UBERON:0000484;6.96e-07;4!UBERON:0000965;6.96e-07;4!UBERON:0001803;6.96e-07;4!UBERON:0001473;9.73e-07;8!UBERON:0004536;9.73e-07;8!UBERON:0006558;9.73e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.60e-23,4;UBERON:0010260,3.48e-22,9;UBERON:0002049,1.26e-21,78;UBERON:0007798,1.26e-21,78;UBERON:0007625,1.39e-18,11;UBERON:0001778,1.02e-17,3;UBERON:0001775,1.02e-17,3;UBERON:0004535,3.87e-16,109;UBERON:0002203,1.33e-15,6;UBERON:0001768,1.33e-15,6;UBERON:0002200,1.33e-15,6;UBERON:0001009,1.37e-15,112;UBERON:0000055,4.25e-15,68;UBERON:0001801,1.77e-14,14;UBERON:0001310,3.20e-13,4;UBERON:0007500,3.41e-11,59;UBERON:0001981,3.41e-11,59;UBERON:0004537,3.41e-11,59;UBERON:0006965,3.41e-11,59;UBERON:0002066,6.33e-11,5;UBERON:0001638,2.46e-10,9;UBERON:0003920,2.46e-10,9;UBERON:0004582,2.46e-10,9;UBERON:0000019,5.91e-10,20;UBERON:0000047,5.91e-10,20;UBERON:0010312,5.91e-10,20;UBERON:0004088,5.91e-10,20;UBERON:0010230,5.91e-10,20;UBERON:0003072,5.91e-10,20;UBERON:0004128,5.91e-10,20;UBERON:0003071,5.91e-10,20;UBERON:0000970,1.88e-09,21;UBERON:0002104,1.88e-09,21;UBERON:0003422,3.42e-09,6;UBERON:0001456,5.40e-09,22;UBERON:0004872,9.97e-09,83;UBERON:0006876,1.48e-08,11;UBERON:0000020,3.41e-08,24;UBERON:0001032,3.41e-08,24;UBERON:0004456,3.41e-08,24;UBERON:0003914,1.55e-07,117;UBERON:0002506,2.50e-07,1;UBERON:0001769,2.50e-07,1;UBERON:0010077,6.77e-07,4;UBERON:0005389,6.77e-07,4;UBERON:0000484,6.77e-07,4;UBERON:0002546,6.77e-07,4;UBERON:0000965,6.77e-07,4;UBERON:0001803,6.77e-07,4;UBERON:0003073,6.77e-07,4;UBERON:0005426,6.77e-07,4 | |||
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| ||
|short_description=p8@ITPR2 | |||
}} | }} |
Latest revision as of 23:42, 17 September 2015
Short description: | p8@ITPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITPR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000545902_5end |
EntrezGene: | ITPR2 |
HGNC: | 6181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.02e-17 | 3 |
ciliated epithelial cell | 1.02e-17 | 3 |
multi-ciliated epithelial cell | 1.02e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.02e-17 | 3 |
smooth muscle cell of the umbilical artery | 3.20e-13 | 4 |
smooth muscle cell of the umbilical vein | 5.56e-13 | 2 |
mesenchymal stem cell of umbilical cord | 3.42e-09 | 6 |
lymphangioblast | 1.05e-08 | 6 |
endothelial cell of lymphatic vessel | 1.05e-08 | 6 |
vascular lymphangioblast | 1.05e-08 | 6 |
mesodermal cell | 2.61e-08 | 121 |
vascular associated smooth muscle cell | 7.91e-08 | 32 |
endothelial cell of vascular tree | 1.33e-07 | 24 |
extraembryonic cell | 2.47e-07 | 19 |
pigment cell (sensu Vertebrata) | 2.50e-07 | 1 |
iris pigment epithelial cell | 2.50e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 3.78e-07 | 1 |
mucus secreting cell | 4.78e-07 | 1 |
crystallin accumulating cell | 6.77e-07 | 4 |
vertebrate lens cell | 6.77e-07 | 4 |
lens epithelial cell | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.78e-07 | 1 |