FFCP PHASE1:Hg19::chr8:3040586..3040628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000520451_5end | |association_with_transcript=39bp_to_ENST00000520451_5end | ||
|cluster_id=chr8:3040586..3040628,- | |||
|description=CAGE_peak_7_at_CSMD1_5end | |description=CAGE_peak_7_at_CSMD1_5end | ||
|id=chr8:3040586..3040628,- | |id=chr8:3040586..3040628,- | ||
|ontology_enrichment_celltype=CL:0002541!2.26e-09!3;CL:0000054!7.58e-07!2;CL:0000137!7.58e-07!2;CL:0000092!7.58e-07!2 | |ontology_enrichment_celltype=CL:0002541!2.26e-09!3;CL:0000054!7.58e-07!2;CL:0000137!7.58e-07!2;CL:0000092!7.58e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.66e-15;3!CL:0000054;9.39e-11;2!CL:0000137;9.39e-11;2!CL:0000092;9.39e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.84e-15,3;CL:0000054,9.16e-11,2;CL:0000137,9.16e-11,2;CL:0000092,9.16e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.11e-08!235;DOID:14566!7.05e-08!239;DOID:1909!3.64e-07!2;DOID:200!7.58e-07!2;DOID:4305!7.58e-07!2 | |ontology_enrichment_disease=DOID:162!3.11e-08!235;DOID:14566!7.05e-08!239;DOID:1909!3.64e-07!2;DOID:200!7.58e-07!2;DOID:4305!7.58e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.00e-11;2!DOID:1036;5.10e-11;8!DOID:200;9.39e-11;2!DOID:4305;9.39e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.33e-13,235;DOID:14566,1.10e-12,239;DOID:1909,2.57e-11,2;DOID:1036,5.24e-11,8;DOID:200,9.16e-11,2;DOID:4305,9.16e-11,2;DOID:2531,3.62e-08,51;DOID:0060083,3.62e-08,51;DOID:0050687,1.34e-07,143;DOID:0050686,6.80e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.26e-09!3;UBERON:0000920!2.26e-09!3;UBERON:0003124!7.74e-07!7 | |ontology_enrichment_uberon=UBERON:0000476!2.26e-09!3;UBERON:0000920!2.26e-09!3;UBERON:0003124!7.74e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.66e-15;3!UBERON:0000920;3.66e-15;3!UBERON:0002371;8.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.84e-15,3;UBERON:0003124,2.47e-11,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.80160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,1.08182271390393,0,0,0,0,0,8.2468104365334,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,7.37335585849022,6.14607972596635,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,7.63411774174908,7.14748103602986,0,9.99555821682474,2.55200927785536,2.01514705484097,3.19820865611181,0,0,0,11.7309743520934,12.9401272649708,10.9084031534298,8.34916423986414,0,6.96293612942489,0,0,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78154502040776,5.16657990427773,0.126621591911757,0,13.6269994427607,0,5.39485945871752,0,0,0,0,0,0,0.815425236441684,1.04602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,5.13790242934655,0,0,0,0,0,0,8.48092119751265,0,0.122026264901963,0,0,0,0,0,0.499921631848426,4.54947352624943,8.56396000634902,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,5.40700399258183,0,0,0,5.16644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,11.9005990535077,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,4.43511850813194,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,2.14264726326789,7.41079230602953,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,2.62237372712869,0,0.101988829741982,0,0,0,4.54672189309436,9.11078042531007,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@CSMD1 | |short_description=p7@CSMD1 | ||
}} | }} |
Latest revision as of 23:37, 17 September 2015
Short description: | p7@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CSMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000520451_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.84e-15 | 3 |
bone matrix secreting cell | 9.16e-11 | 2 |
osteocyte | 9.16e-11 | 2 |
osteoclast | 9.16e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.84e-15 | 3 |
chorion | 2.47e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.33e-13 | 235 |
disease of cellular proliferation | 1.10e-12 | 239 |
melanoma | 2.57e-11 | 2 |
chronic leukemia | 5.24e-11 | 8 |
giant cell tumor | 9.16e-11 | 2 |
bone giant cell tumor | 9.16e-11 | 2 |
hematologic cancer | 3.62e-08 | 51 |
immune system cancer | 3.62e-08 | 51 |
cell type cancer | 1.34e-07 | 143 |
organ system cancer | 6.80e-07 | 137 |