FFCP PHASE1:Hg19::chr6:31623665..31623677,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31623665..31623677,+ to FFCP PHASE1:Hg19::chr6:31623665..31623677,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55937 | |EntrezGene=55937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |HGNC=13916 | ||
|TSSclassifier=strong | |||
|UniProt=O95445 | |UniProt=O95445 | ||
|association_with_transcript=0bp_to_NM_019101,uc003nvl.2_5end | |||
|cluster_id=chr6:31623665..31623677,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOM_5end | |||
|id=chr6:31623665..31623677,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.00e-33!12;CL:0000417!2.00e-33!12;CL:0000668!2.00e-33!12;CL:0000414!2.00e-33!12;CL:0000412!2.00e-33!12;CL:0000182!2.00e-33!12;CL:0000223!2.79e-13!59;CL:0002322!2.13e-11!5;CL:0000313!1.48e-07!1;CL:0002563!2.99e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.13e-38;12!CL:0000313;1.61e-10;1!CL:0002563;2.72e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.10e-38,12;CL:0000223,5.23e-15,58;CL:0000313,1.61e-10,1;CL:0002563,2.72e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.81e-31;11!UBERON:0009497;3.19e-26;13!UBERON:0003104;5.97e-24;31!UBERON:0001041;3.80e-11;30!CL:0000223;7.06e-10;58 | |||
|ontology_enrichment_disease=DOID:2152!1.48e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.61e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.76e-32!19;UBERON:0006925!1.76e-32!19;UBERON:0008836!1.76e-32!19;UBERON:0005057!5.23e-28!26;UBERON:0008835!8.20e-28!22;UBERON:0003894!8.20e-28!22;UBERON:0009854!1.58e-26!23;UBERON:0007499!2.90e-24!25;UBERON:0009497!2.90e-24!25;UBERON:0000015!2.90e-24!25;UBERON:0002423!2.90e-24!25;UBERON:0006235!2.90e-24!25;UBERON:0004161!2.90e-24!25;UBERON:0009856!2.91e-23!26;UBERON:0002365!3.18e-19!31;UBERON:0002330!3.18e-19!31;UBERON:0003929!1.30e-17!54;UBERON:0005172!3.35e-17!55;UBERON:0005173!3.35e-17!55;UBERON:0002368!8.00e-17!35;UBERON:0002417!2.96e-15!61;UBERON:0000916!2.96e-15!61;UBERON:0004921!1.18e-13!129;UBERON:0004185!1.18e-13!129;UBERON:0000949!1.09e-12!45;UBERON:0002530!3.00e-11!59;UBERON:0001155!4.26e-11!9;UBERON:0001007!9.86e-11!155;UBERON:0001555!9.86e-11!155;UBERON:0007026!9.86e-11!155;UBERON:0005911!1.01e-10!82;UBERON:0000160!5.85e-10!27;UBERON:0005409!8.76e-10!35;UBERON:0004119!1.57e-09!169;UBERON:0000925!1.57e-09!169;UBERON:0006595!1.57e-09!169;UBERON:0000059!4.18e-09!11;UBERON:0005177!1.31e-07!107;UBERON:0004911!1.48e-07!1;UBERON:0001242!2.99e-07!4;UBERON:0001262!2.99e-07!4;UBERON:0004786!2.99e-07!4;UBERON:0004808!2.99e-07!4;UBERON:0001277!2.99e-07!4;UBERON:0009569!4.48e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.74e-40;19!UBERON:0006925;5.74e-40;19!UBERON:0002423;4.14e-30;25!UBERON:0002365;2.39e-23;31!UBERON:0002330;2.39e-23;31!UBERON:0002368;1.82e-20;33!UBERON:0000949;1.11e-14;43!UBERON:0005172;1.45e-13;52!UBERON:0005173;1.45e-13;52!UBERON:0002417;3.30e-11;58!UBERON:0000916;3.30e-11;58!UBERON:0004911;1.61e-10;1!UBERON:0001242;2.72e-10;4!UBERON:0001262;2.72e-10;4!UBERON:0004786;2.72e-10;4!UBERON:0004808;2.72e-10;4!UBERON:0001277;2.72e-10;4!UBERON:0002530;2.67e-09;57!UBERON:0001007;3.21e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.61e-40,19;UBERON:0006925,5.61e-40,19;UBERON:0008836,5.61e-40,19;UBERON:0008835,2.24e-34,22;UBERON:0003894,2.24e-34,22;UBERON:0009854,7.81e-33,23;UBERON:0007499,4.06e-30,25;UBERON:0009497,4.06e-30,25;UBERON:0000015,4.06e-30,25;UBERON:0002423,4.06e-30,25;UBERON:0006235,4.06e-30,25;UBERON:0004161,4.06e-30,25;UBERON:0009856,6.47e-29,26;UBERON:0002365,4.57e-24,31;UBERON:0002330,4.57e-24,31;UBERON:0003929,1.17e-23,54;UBERON:0002368,3.51e-21,35;UBERON:0005172,6.98e-20,54;UBERON:0005173,6.98e-20,54;UBERON:0002417,9.95e-18,60;UBERON:0000916,9.95e-18,60;UBERON:0000949,3.30e-16,45;UBERON:0005911,6.03e-15,82;UBERON:0002530,6.95e-15,59;UBERON:0004921,1.72e-11,118;UBERON:0004911,1.61e-10,1;UBERON:0001242,2.72e-10,4;UBERON:0001262,2.72e-10,4;UBERON:0004786,2.72e-10,4;UBERON:0004808,2.72e-10,4;UBERON:0001277,2.72e-10,4;UBERON:0005177,7.63e-10,101;UBERON:0001007,5.64e-09,145;UBERON:0001555,5.64e-09,145;UBERON:0007026,5.64e-09,145;UBERON:0009569,1.04e-08,112;UBERON:0003104,5.09e-08,160;UBERON:0009142,5.09e-08,160;UBERON:0004119,6.10e-08,160;UBERON:0000925,6.10e-08,160;UBERON:0006595,6.10e-08,160;UBERON:0001041,8.81e-08,87;UBERON:0000490,1.99e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2414053617164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.8556719377534,61.9181146506904,34.8566044942028,0,8.85516757510418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31781578203138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.066120998577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.5322408334428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,3.25112064298064,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4846354574708,15.5990700968303,13.845864208036,17.4575178582339,0.590564889088493,0,0,0,0,0,0,0,0,0,0,6.85609653503024,10.1237355100546,0,0,0,0,0,0,0,0,0,0,0,0,0,75.6209525778905,31.8016533389331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56597604516909,0,4.02329152441489,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2414053617164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.8556719377534,61.9181146506904,34.8566044942028,0,8.85516757510418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31781578203138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.066120998577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.5322408334428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,3.25112064298064,0,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4846354574708,15.5990700968303,13.845864208036,17.4575178582339,0.590564889088493,0,0,0,0,0,0,0,0,0,0,6.85609653503024,10.1237355100546,0,0,0,0,0,0,0,0,0,0,0,0,0,75.6209525778905,31.8016533389331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56597604516909,0,4.02329152441489,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.874238242015829,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@APOM | |||
}} | }} |
Latest revision as of 22:54, 17 September 2015
Short description: | p4@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOM_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_019101, uc003nvl.2_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | O95445 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.10e-38 | 12 |
endodermal cell | 5.23e-15 | 58 |
serous secreting cell | 1.61e-10 | 1 |
intestinal epithelial cell | 2.72e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.61e-10 | 1 |