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FFCP PHASE1:Hg19::chr7:26191809..26191890,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:26191809..26191890,+
|DHSsupport=supported 
|short_description=p1@NFE2L3
|DPIdataset=robust
|description=CAGE_peak_1_at_NFE2L3_5end
|association_with_transcript=0bp_to_ENST00000056233,NM_004289,uc003sxq.2_5end
|EntrezGene=9603
|EntrezGene=9603
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7783
|HGNC=7783
|TSSclassifier=strong
|UniProt=Q9Y4A8
|UniProt=Q9Y4A8
|association_with_transcript=0bp_to_ENST00000056233,NM_004289,uc003sxq.2_5end
|cluster_id=chr7:26191809..26191890,+
|description=CAGE_peak_1_at_NFE2L3_5end
|id=chr7:26191809..26191890,+
|ontology_enrichment_celltype=CL:0000066!1.04e-18!254;CL:0000213!1.08e-12!57;CL:0000215!1.08e-12!57;CL:0002139!9.49e-12!24;CL:0000076!8.07e-11!62;CL:0002078!3.33e-10!44;CL:0000115!6.05e-10!35;CL:0000071!1.22e-08!18;CL:0002546!1.22e-08!18;CL:0000222!1.37e-08!119;CL:0002321!3.43e-08!248;CL:0000220!1.18e-07!246;CL:0000012!4.89e-07!682;CL:1000497!9.22e-07!18;CL:0002518!9.22e-07!18
|ontology_enrichment_celltype_v019=CL:0002139;7.07e-12;24!CL:0000115;4.28e-09;36!CL:0000071;1.05e-08;18!CL:0000213;1.35e-07;58!CL:0000215;1.35e-07;58!CL:1000497;3.66e-07;17!CL:0002518;3.66e-07;17!CL:0002078;4.04e-07;45
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-19,253;CL:0000213,4.99e-13,58;CL:0000215,4.99e-13,58;CL:0002139,7.56e-12,24;CL:0002078,1.65e-10,45;CL:0000115,1.88e-10,36;CL:0000076,3.16e-10,63;CL:0000071,1.04e-08,18;CL:0002546,1.04e-08,18;CL:0000222,1.69e-08,121;CL:0002321,2.29e-08,250;CL:1000497,4.39e-07,17;CL:0002518,4.39e-07,17
|ontology_enrichment_development_v019=CL:0002546;1.05e-08;18
|ontology_enrichment_disease=DOID:14566!6.03e-11!239;DOID:162!9.16e-11!235;DOID:305!7.38e-08!106;DOID:0050686!1.28e-07!137
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=DOID:14566,1.56e-11,239;DOID:162,2.40e-11,235;DOID:305,3.33e-08,106;DOID:0050686,7.11e-08,137;DOID:0050687,9.04e-07,143
|ontology_enrichment_uberon=UBERON:0002049!1.33e-09!79;UBERON:0007798!1.33e-09!79;UBERON:0001986!1.22e-08!18;UBERON:0004638!1.22e-08!18;UBERON:0004852!1.22e-08!18;UBERON:0000487!3.33e-08!22;UBERON:0000055!3.61e-08!69;UBERON:0003886!2.21e-07!63;UBERON:0003914!4.29e-07!118;UBERON:0006554!7.02e-07!44
|ontology_enrichment_uberon_v019=UBERON:0000490;9.14e-09;33!UBERON:0004638;1.05e-08;18!UBERON:0001986;1.05e-08;18!UBERON:0004852;1.05e-08;18!UBERON:0000487;2.63e-08;22!UBERON:0006554;9.70e-07;30!UBERON:0001008;9.70e-07;30
|ontology_enrichment_uberon_v019_2=UBERON:0002049,9.53e-10,78;UBERON:0007798,9.53e-10,78;UBERON:0004638,1.04e-08,18;UBERON:0001986,1.04e-08,18;UBERON:0004852,1.04e-08,18;UBERON:0000055,2.68e-08,68;UBERON:0000487,2.87e-08,22;UBERON:0003914,4.57e-07,117;UBERON:0005177,7.59e-07,101
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|short_description=p1@NFE2L3
}}
}}

Latest revision as of 22:50, 17 September 2015

Short description:p1@NFE2L3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_NFE2L3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000056233, NM_004289, uc003sxq.2_5end
EntrezGene:NFE2L3
HGNC: 7783
UniProt: Q9Y4A8
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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