FFCP PHASE1:Hg19::chr7:26191809..26191890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9603 | |EntrezGene=9603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7783 | |HGNC=7783 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9Y4A8 | |UniProt=Q9Y4A8 | ||
|association_with_transcript=0bp_to_ENST00000056233,NM_004289,uc003sxq.2_5end | |association_with_transcript=0bp_to_ENST00000056233,NM_004289,uc003sxq.2_5end | ||
|cluster_id=chr7:26191809..26191890,+ | |||
|description=CAGE_peak_1_at_NFE2L3_5end | |description=CAGE_peak_1_at_NFE2L3_5end | ||
|id=chr7:26191809..26191890,+ | |id=chr7:26191809..26191890,+ | ||
Latest revision as of 22:50, 17 September 2015
| Short description: | p1@NFE2L3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NFE2L3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000056233, NM_004289, uc003sxq.2_5end |
| EntrezGene: | NFE2L3 |
| HGNC: | 7783 |
| UniProt: | Q9Y4A8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NFE2L3 |
|---|
0
25
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75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.07e-19 | 253 |
| lining cell | 4.99e-13 | 58 |
| barrier cell | 4.99e-13 | 58 |
| endothelial cell of vascular tree | 7.56e-12 | 24 |
| meso-epithelial cell | 1.65e-10 | 45 |
| endothelial cell | 1.88e-10 | 36 |
| squamous epithelial cell | 3.16e-10 | 63 |
| blood vessel endothelial cell | 1.04e-08 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.04e-08 | 18 |
| mesodermal cell | 1.69e-08 | 121 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 9.53e-10 | 78 |
| vascular system | 9.53e-10 | 78 |
| blood vessel endothelium | 1.04e-08 | 18 |
| endothelium | 1.04e-08 | 18 |
| cardiovascular system endothelium | 1.04e-08 | 18 |
| vessel | 2.68e-08 | 68 |
| simple squamous epithelium | 2.87e-08 | 22 |
| epithelial tube | 4.57e-07 | 117 |
| trunk region element | 7.59e-07 | 101 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| disease of cellular proliferation | 1.56e-11 | 239 |
| cancer | 2.40e-11 | 235 |
| carcinoma | 3.33e-08 | 106 |
| organ system cancer | 7.11e-08 | 137 |
| cell type cancer | 9.04e-07 | 143 |
Showing 1 to 5 of 5 entries
