FFCP PHASE1:Hg19::chr1:158325748..158325765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt=Q13973 | |UniProt=Q13973 | ||
|association_with_transcript=0bp_to_X79517_5end | |association_with_transcript=0bp_to_X79517_5end | ||
|cluster_id=chr1:158325748..158325765,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_12_at_CD1E_5end | |description=CAGE_peak_12_at_CD1E_5end | ||
|id=chr1:158325748..158325765,+ | |id=chr1:158325748..158325765,+ | ||
|ontology_enrichment_celltype=CL:0000990!1.63e-36!8;CL:0000840!1.50e-35!5;CL:0001029!1.50e-35!5;CL:0000451!6.59e-30!10;CL:0000453!1.85e-11!5;CL:0000738!3.06e-08!140;CL:0001014!5.74e-08!2;CL:0001016!5.74e-08!2 | |ontology_enrichment_celltype=CL:0000990!1.63e-36!8;CL:0000840!1.50e-35!5;CL:0001029!1.50e-35!5;CL:0000451!6.59e-30!10;CL:0000453!1.85e-11!5;CL:0000738!3.06e-08!140;CL:0001014!5.74e-08!2;CL:0001016!5.74e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.91e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.41e-14!4;UBERON:0005058!1.41e-14!4;UBERON:0009113!1.41e-14!4;UBERON:0003295!1.41e-14!4;UBERON:0005562!1.41e-14!4;UBERON:0000974!1.09e-12!10;UBERON:0003351!4.97e-10!6;UBERON:0004177!1.01e-08!7;UBERON:0000341!7.52e-08!2;UBERON:0002390!1.75e-07!102;UBERON:0003061!1.75e-07!102;UBERON:0002193!9.52e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.74e-57;2!UBERON:0005058;1.74e-57;2!UBERON:0009113;1.74e-57;2!UBERON:0004177;9.61e-24;5!UBERON:0005057;9.61e-24;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.37e-29,4;UBERON:0005058,2.37e-29,4;UBERON:0009113,2.37e-29,4;UBERON:0003295,2.37e-29,4;UBERON:0005562,2.37e-29,4;UBERON:0003351,5.89e-20,6;UBERON:0004177,2.90e-17,7;UBERON:0005057,2.90e-17,7;UBERON:0000974,2.12e-12,10;UBERON:0003408,2.12e-12,10;UBERON:0001042,2.12e-12,10;UBERON:0009145,2.12e-12,10;UBERON:0006562,2.30e-11,11;UBERON:0009722,2.30e-11,11;UBERON:0007690,2.30e-11,11;UBERON:0008814,2.60e-07,18;UBERON:0001557,5.66e-07,19 | |||
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|short_description=p12@CD1E | |short_description=p12@CD1E | ||
}} | }} |
Latest revision as of 21:09, 17 September 2015
Short description: | p12@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_X79517_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | Q13973 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.37e-29 | 4 |
hemolymphoid system gland | 2.37e-29 | 4 |
thymic region | 2.37e-29 | 4 |
pharyngeal gland | 2.37e-29 | 4 |
thymus primordium | 2.37e-29 | 4 |
pharyngeal epithelium | 5.89e-20 | 6 |
hemopoietic organ | 2.90e-17 | 7 |
immune organ | 2.90e-17 | 7 |
neck | 2.12e-12 | 10 |
gland of gut | 2.12e-12 | 10 |
chordate pharynx | 2.12e-12 | 10 |
pharyngeal region of foregut | 2.12e-12 | 10 |
pharynx | 2.30e-11 | 11 |
entire pharyngeal arch endoderm | 2.30e-11 | 11 |
early pharyngeal endoderm | 2.30e-11 | 11 |
pharyngeal arch system | 2.60e-07 | 18 |
upper respiratory tract | 5.66e-07 | 19 |