FFCP PHASE1:Hg19::chr1:158323215..158323229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET31 | |UniProt=E7ET31 | ||
|association_with_transcript=-24bp_to_ENST00000434258,uc010pid.1_5end | |association_with_transcript=-24bp_to_ENST00000434258,uc010pid.1_5end | ||
|cluster_id=chr1:158323215..158323229,+ | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_18_at_CD1E_5end | |description=CAGE_peak_18_at_CD1E_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.07e-34!4;UBERON:0005058!7.07e-34!4;UBERON:0009113!7.07e-34!4;UBERON:0003295!7.07e-34!4;UBERON:0005562!7.07e-34!4;UBERON:0003351!5.43e-23!6;UBERON:0004177!7.13e-20!7;UBERON:0000974!3.04e-14!10;UBERON:0003408!3.04e-14!10;UBERON:0001042!3.04e-14!10;UBERON:0009145!3.04e-14!10;UBERON:0006562!4.80e-13!11;UBERON:0009722!4.80e-13!11;UBERON:0007690!4.80e-13!11;UBERON:0008814!7.75e-10!15;UBERON:0001557!5.73e-08!19 | |ontology_enrichment_uberon=UBERON:0002370!7.07e-34!4;UBERON:0005058!7.07e-34!4;UBERON:0009113!7.07e-34!4;UBERON:0003295!7.07e-34!4;UBERON:0005562!7.07e-34!4;UBERON:0003351!5.43e-23!6;UBERON:0004177!7.13e-20!7;UBERON:0000974!3.04e-14!10;UBERON:0003408!3.04e-14!10;UBERON:0001042!3.04e-14!10;UBERON:0009145!3.04e-14!10;UBERON:0006562!4.80e-13!11;UBERON:0009722!4.80e-13!11;UBERON:0007690!4.80e-13!11;UBERON:0008814!7.75e-10!15;UBERON:0001557!5.73e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.99e-98;2!UBERON:0005058;1.99e-98;2!UBERON:0009113;1.99e-98;2!UBERON:0004177;3.00e-40;5!UBERON:0005057;3.00e-40;5!UBERON:0000077;2.18e-08;27!UBERON:0002405;2.18e-08;27 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.99e-98;2!UBERON:0005058;1.99e-98;2!UBERON:0009113;1.99e-98;2!UBERON:0004177;3.00e-40;5!UBERON:0005057;3.00e-40;5!UBERON:0000077;2.18e-08;27!UBERON:0002405;2.18e-08;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.60e-50,4;UBERON:0005058,6.60e-50,4;UBERON:0009113,6.60e-50,4;UBERON:0003295,6.60e-50,4;UBERON:0005562,6.60e-50,4;UBERON:0003351,9.87e-34,6;UBERON:0004177,4.21e-29,7;UBERON:0005057,4.21e-29,7;UBERON:0000974,9.44e-21,10;UBERON:0003408,9.44e-21,10;UBERON:0001042,9.44e-21,10;UBERON:0009145,9.44e-21,10;UBERON:0006562,5.63e-19,11;UBERON:0009722,5.63e-19,11;UBERON:0007690,5.63e-19,11;UBERON:0008814,4.81e-12,18;UBERON:0001557,1.81e-11,19;UBERON:0004807,4.06e-08,28;UBERON:0000077,7.15e-08,29 | |||
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|short_description=p18@CD1E | |short_description=p18@CD1E | ||
}} | }} |
Latest revision as of 20:55, 17 September 2015
Short description: | p18@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CD1E_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -24bp_to_ENST00000434258, uc010pid.1_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | E7ET31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.60e-50 | 4 |
hemolymphoid system gland | 6.60e-50 | 4 |
thymic region | 6.60e-50 | 4 |
pharyngeal gland | 6.60e-50 | 4 |
thymus primordium | 6.60e-50 | 4 |
pharyngeal epithelium | 9.87e-34 | 6 |
hemopoietic organ | 4.21e-29 | 7 |
immune organ | 4.21e-29 | 7 |
neck | 9.44e-21 | 10 |
gland of gut | 9.44e-21 | 10 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
entire pharyngeal arch endoderm | 5.63e-19 | 11 |
early pharyngeal endoderm | 5.63e-19 | 11 |
pharyngeal arch system | 4.81e-12 | 18 |
upper respiratory tract | 1.81e-11 | 19 |
respiratory system epithelium | 4.06e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.15e-08 | 29 |