FFCP PHASE1:Hg19::chr19:39340542..39340559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3191 | |EntrezGene=3191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5045 | |HGNC=5045 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPK8 | |UniProt=B4DPK8 | ||
|association_with_transcript=16bp_to_ENST00000536292_5end | |association_with_transcript=16bp_to_ENST00000536292_5end | ||
|cluster_id=chr19:39340542..39340559,- | |||
|description=CAGE_peak_3_at_HNRNPL_5end | |description=CAGE_peak_3_at_HNRNPL_5end | ||
|id=chr19:39340542..39340559,- | |id=chr19:39340542..39340559,- | ||
|ontology_enrichment_celltype=CL:0000012!1.24e-31!682;CL:0000548!4.44e-30!679;CL:0000004!4.44e-30!679;CL:0000255!4.44e-30!679;CL:0000003!2.06e-23!722;CL:0000144!2.85e-21!625;CL:0000066!3.93e-18!254;CL:0000063!1.25e-15!578;CL:0002321!4.01e-14!248;CL:0002371!5.94e-14!591;CL:0000220!2.04e-13!246;CL:0000222!1.84e-09!119;CL:0000071!8.48e-08!18;CL:0002546!8.48e-08!18;CL:0000115!1.34e-07!35;CL:1000449!2.75e-07!16;CL:0000076!2.90e-07!62;CL:0002078!3.75e-07!44 | |ontology_enrichment_celltype=CL:0000012!1.24e-31!682;CL:0000548!4.44e-30!679;CL:0000004!4.44e-30!679;CL:0000255!4.44e-30!679;CL:0000003!2.06e-23!722;CL:0000144!2.85e-21!625;CL:0000066!3.93e-18!254;CL:0000063!1.25e-15!578;CL:0002321!4.01e-14!248;CL:0002371!5.94e-14!591;CL:0000220!2.04e-13!246;CL:0000222!1.84e-09!119;CL:0000071!8.48e-08!18;CL:0002546!8.48e-08!18;CL:0000115!1.34e-07!35;CL:1000449!2.75e-07!16;CL:0000076!2.90e-07!62;CL:0002078!3.75e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.32e-08;15!CL:0000071;1.04e-07;18!CL:0002681;7.38e-07;12!CL:0002584;7.38e-07;12!CL:0000115;7.62e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-18,253;CL:0002321,2.92e-14,250;CL:0000222,1.46e-09,121;CL:1000449,4.78e-08,15;CL:0000115,5.19e-08,36;CL:0000071,8.48e-08,18;CL:0002546,8.48e-08,18;CL:0002078,1.56e-07,45;CL:0000076,7.92e-07,63;CL:0002681,8.84e-07,12;CL:0002584,8.84e-07,12;CL:0000213,9.36e-07,58;CL:0000215,9.36e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.04e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.05e-08!118;UBERON:0001986!8.48e-08!18;UBERON:0004638!8.48e-08!18;UBERON:0004852!8.48e-08!18;UBERON:0000487!1.94e-07!22;UBERON:0004211!2.75e-07!16;UBERON:0001285!2.75e-07!16;UBERON:0007684!2.75e-07!16;UBERON:0003220!2.75e-07!16;UBERON:0004208!2.75e-07!16;UBERON:0002049!2.96e-07!79;UBERON:0007798!2.96e-07!79;UBERON:0001737!4.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.32e-08;15!UBERON:0004819;4.32e-08;15!UBERON:0001285;4.32e-08;15!UBERON:0007684;4.32e-08;15!UBERON:0004638;1.04e-07;18!UBERON:0001986;1.04e-07;18!UBERON:0004852;1.04e-07;18!UBERON:0000353;2.44e-07;15!UBERON:0000490;2.70e-07;33!UBERON:0000487;2.79e-07;22!UBERON:0001737;3.41e-07;9!UBERON:0001557;3.41e-07;9!UBERON:0001225;7.38e-07;12!UBERON:0008987;7.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.28e-08,117;UBERON:0004211,4.78e-08,15;UBERON:0009773,4.78e-08,15;UBERON:0001231,4.78e-08,15;UBERON:0001285,4.78e-08,15;UBERON:0007684,4.78e-08,15;UBERON:0004208,4.78e-08,15;UBERON:0004638,8.48e-08,18;UBERON:0001986,8.48e-08,18;UBERON:0004852,8.48e-08,18;UBERON:0002049,9.91e-08,78;UBERON:0007798,9.91e-08,78;UBERON:0000487,1.94e-07,22;UBERON:0000353,2.43e-07,15;UBERON:0001737,4.00e-07,9;UBERON:0006555,6.39e-07,16;UBERON:0004819,6.39e-07,16;UBERON:0007500,7.77e-07,59;UBERON:0001981,7.77e-07,59;UBERON:0004537,7.77e-07,59;UBERON:0006965,7.77e-07,59;UBERON:0001225,8.84e-07,12;UBERON:0008987,8.84e-07,12 | |||
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| ||
|short_description=p3@HNRNPL | |short_description=p3@HNRNPL | ||
}} | }} |
Latest revision as of 20:41, 17 September 2015
Short description: | p3@HNRNPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNRNPL_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000536292_5end |
EntrezGene: | HNRNPL |
HGNC: | 5045 |
UniProt: | B4DPK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.38e-18 | 253 |
embryonic cell | 2.92e-14 | 250 |
mesodermal cell | 1.46e-09 | 121 |
epithelial cell of nephron | 4.78e-08 | 15 |
endothelial cell | 5.19e-08 | 36 |
blood vessel endothelial cell | 8.48e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.48e-08 | 18 |
meso-epithelial cell | 1.56e-07 | 45 |
squamous epithelial cell | 7.92e-07 | 63 |
kidney cortical cell | 8.84e-07 | 12 |
renal cortical epithelial cell | 8.84e-07 | 12 |
lining cell | 9.36e-07 | 58 |
barrier cell | 9.36e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.28e-08 | 117 |
nephron epithelium | 4.78e-08 | 15 |
renal tubule | 4.78e-08 | 15 |
nephron tubule | 4.78e-08 | 15 |
nephron | 4.78e-08 | 15 |
uriniferous tubule | 4.78e-08 | 15 |
nephrogenic mesenchyme | 4.78e-08 | 15 |
blood vessel endothelium | 8.48e-08 | 18 |
endothelium | 8.48e-08 | 18 |
cardiovascular system endothelium | 8.48e-08 | 18 |
vasculature | 9.91e-08 | 78 |
vascular system | 9.91e-08 | 78 |
simple squamous epithelium | 1.94e-07 | 22 |
parenchyma | 2.43e-07 | 15 |
larynx | 4.00e-07 | 9 |
excretory tube | 6.39e-07 | 16 |
kidney epithelium | 6.39e-07 | 16 |
epithelial tube open at both ends | 7.77e-07 | 59 |
blood vessel | 7.77e-07 | 59 |
blood vasculature | 7.77e-07 | 59 |
vascular cord | 7.77e-07 | 59 |
cortex of kidney | 8.84e-07 | 12 |
renal parenchyma | 8.84e-07 | 12 |