FFCP PHASE1:Hg19::chr1:158260579..158260595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=911 | |EntrezGene=911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1636 | |HGNC=1636 | ||
|TSSclassifier=strong | |||
|UniProt=B4DP91 | |UniProt=B4DP91 | ||
|association_with_transcript=153bp_to_ENST00000454192_5end | |association_with_transcript=153bp_to_ENST00000454192_5end | ||
|cluster_id=chr1:158260579..158260595,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_3_at_CD1C_5end | |description=CAGE_peak_3_at_CD1C_5end | ||
|id=chr1:158260579..158260595,+ | |id=chr1:158260579..158260595,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.23e-21!140;CL:0002087!2.85e-18!119;CL:0000037!2.60e-17!172;CL:0000566!2.60e-17!172;CL:0000988!5.36e-16!182;CL:0002031!1.02e-15!124;CL:0002009!2.61e-14!65;CL:0002032!4.31e-14!165;CL:0000837!4.31e-14!165;CL:0000766!1.80e-13!76;CL:0002057!3.43e-13!42;CL:0000840!3.83e-13!5;CL:0001029!3.83e-13!5;CL:0002194!5.89e-13!63;CL:0000576!5.89e-13!63;CL:0000040!5.89e-13!63;CL:0000559!5.89e-13!63;CL:0000557!8.08e-13!71;CL:0000860!3.79e-12!45;CL:0000839!2.35e-11!70;CL:0000763!2.34e-10!112;CL:0000049!2.34e-10!112;CL:0000990!8.87e-09!8;CL:0000236!3.55e-08!14;CL:0000451!3.48e-07!10;CL:0000767!4.97e-07!3;CL:0000842!5.78e-07!3 | |ontology_enrichment_celltype=CL:0000738!5.23e-21!140;CL:0002087!2.85e-18!119;CL:0000037!2.60e-17!172;CL:0000566!2.60e-17!172;CL:0000988!5.36e-16!182;CL:0002031!1.02e-15!124;CL:0002009!2.61e-14!65;CL:0002032!4.31e-14!165;CL:0000837!4.31e-14!165;CL:0000766!1.80e-13!76;CL:0002057!3.43e-13!42;CL:0000840!3.83e-13!5;CL:0001029!3.83e-13!5;CL:0002194!5.89e-13!63;CL:0000576!5.89e-13!63;CL:0000040!5.89e-13!63;CL:0000559!5.89e-13!63;CL:0000557!8.08e-13!71;CL:0000860!3.79e-12!45;CL:0000839!2.35e-11!70;CL:0000763!2.34e-10!112;CL:0000049!2.34e-10!112;CL:0000990!8.87e-09!8;CL:0000236!3.55e-08!14;CL:0000451!3.48e-07!10;CL:0000767!4.97e-07!3;CL:0000842!5.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000840;1.39e-33;5!CL:0000990;1.13e-22;8!CL:0000451;1.07e-18;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.47e-33,5;CL:0001029,1.47e-33,5;CL:0000990,1.17e-22,8;CL:0000451,1.10e-18,10 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.96e-12;2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.16e-22!102;UBERON:0003061!3.16e-22!102;UBERON:0002193!9.57e-20!112;UBERON:0004177!2.16e-16!7;UBERON:0002405!1.15e-12!115;UBERON:0002370!2.24e-11!4;UBERON:0005058!2.24e-11!4;UBERON:0009113!2.24e-11!4;UBERON:0003295!2.24e-11!4;UBERON:0005562!2.24e-11!4;UBERON:0002371!5.30e-11!80;UBERON:0003081!2.44e-10!216;UBERON:0001474!5.30e-10!86;UBERON:0004765!4.98e-08!101;UBERON:0001434!4.98e-08!101;UBERON:0000974!7.42e-08!10;UBERON:0003351!1.01e-07!6;UBERON:0002106!8.54e-07!3;UBERON:0004854!8.54e-07!3;UBERON:0009034!8.54e-07!3;UBERON:0002095!8.54e-07!3;UBERON:0004782!8.54e-07!3;UBERON:0003281!8.54e-07!3;UBERON:0009664!8.54e-07!3;UBERON:0002296!8.54e-07!3;UBERON:0005602!8.54e-07!3;UBERON:0001179!8.54e-07!3;UBERON:0006293!8.54e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!3.16e-22!102;UBERON:0003061!3.16e-22!102;UBERON:0002193!9.57e-20!112;UBERON:0004177!2.16e-16!7;UBERON:0002405!1.15e-12!115;UBERON:0002370!2.24e-11!4;UBERON:0005058!2.24e-11!4;UBERON:0009113!2.24e-11!4;UBERON:0003295!2.24e-11!4;UBERON:0005562!2.24e-11!4;UBERON:0002371!5.30e-11!80;UBERON:0003081!2.44e-10!216;UBERON:0001474!5.30e-10!86;UBERON:0004765!4.98e-08!101;UBERON:0001434!4.98e-08!101;UBERON:0000974!7.42e-08!10;UBERON:0003351!1.01e-07!6;UBERON:0002106!8.54e-07!3;UBERON:0004854!8.54e-07!3;UBERON:0009034!8.54e-07!3;UBERON:0002095!8.54e-07!3;UBERON:0004782!8.54e-07!3;UBERON:0003281!8.54e-07!3;UBERON:0009664!8.54e-07!3;UBERON:0002296!8.54e-07!3;UBERON:0005602!8.54e-07!3;UBERON:0001179!8.54e-07!3;UBERON:0006293!8.54e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-45;2!UBERON:0005058;2.03e-45;2!UBERON:0009113;2.03e-45;2!UBERON:0004177;7.24e-19;5!UBERON:0005057;7.24e-19;5!UBERON:0000341;3.24e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.63e-23,4;UBERON:0005058,2.63e-23,4;UBERON:0009113,2.63e-23,4;UBERON:0003295,2.63e-23,4;UBERON:0005562,2.63e-23,4;UBERON:0000974,1.47e-20,10;UBERON:0003351,6.71e-16,6;UBERON:0004177,8.94e-14,7;UBERON:0005057,8.94e-14,7;UBERON:0000341,3.62e-12,2;UBERON:0003408,6.20e-10,10;UBERON:0001042,6.20e-10,10;UBERON:0009145,6.20e-10,10;UBERON:0006562,4.08e-09,11;UBERON:0009722,4.08e-09,11;UBERON:0007690,4.08e-09,11;UBERON:0002405,1.81e-08,93;UBERON:0002390,4.90e-08,98;UBERON:0003061,4.90e-08,98;UBERON:0002193,2.73e-07,108 | |||
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|short_description=p3@CD1C | |short_description=p3@CD1C | ||
}} | }} |
Latest revision as of 20:31, 17 September 2015
Short description: | p3@CD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD1C_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 153bp_to_ENST00000454192_5end |
EntrezGene: | CD1C |
HGNC: | 1636 |
UniProt: | B4DP91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.47e-33 | 5 |
common dendritic progenitor | 1.47e-33 | 5 |
conventional dendritic cell | 1.17e-22 | 8 |
dendritic cell | 1.10e-18 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.63e-23 | 4 |
hemolymphoid system gland | 2.63e-23 | 4 |
thymic region | 2.63e-23 | 4 |
pharyngeal gland | 2.63e-23 | 4 |
thymus primordium | 2.63e-23 | 4 |
neck | 1.47e-20 | 10 |
pharyngeal epithelium | 6.71e-16 | 6 |
hemopoietic organ | 8.94e-14 | 7 |
immune organ | 8.94e-14 | 7 |
throat | 3.62e-12 | 2 |
gland of gut | 6.20e-10 | 10 |
chordate pharynx | 6.20e-10 | 10 |
pharyngeal region of foregut | 6.20e-10 | 10 |
pharynx | 4.08e-09 | 11 |
entire pharyngeal arch endoderm | 4.08e-09 | 11 |
early pharyngeal endoderm | 4.08e-09 | 11 |
immune system | 1.81e-08 | 93 |
hematopoietic system | 4.90e-08 | 98 |
blood island | 4.90e-08 | 98 |
hemolymphoid system | 2.73e-07 | 108 |