FFCP PHASE1:Hg19::chr1:158259823..158259834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=911 | |EntrezGene=911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1636 | |HGNC=1636 | ||
|TSSclassifier=strong | |||
|UniProt=P29017 | |UniProt=P29017 | ||
|association_with_transcript=247bp_to_ENST00000368170_5end | |||
|cluster_id=chr1:158259823..158259834,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_5_at_CD1C_5end | |||
|id=chr1:158259823..158259834,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.99e-30!140;CL:0002087!1.59e-25!119;CL:0002031!2.64e-24!124;CL:0000037!4.29e-23!172;CL:0000566!4.29e-23!172;CL:0000988!2.11e-21!182;CL:0002032!2.03e-19!165;CL:0000837!2.03e-19!165;CL:0002009!2.73e-19!65;CL:0000840!3.28e-19!5;CL:0001029!3.28e-19!5;CL:0000557!2.63e-17!71;CL:0002057!8.34e-17!42;CL:0002194!1.31e-15!63;CL:0000576!1.31e-15!63;CL:0000040!1.31e-15!63;CL:0000559!1.31e-15!63;CL:0000860!1.77e-15!45;CL:0000451!1.29e-14!10;CL:0000766!5.55e-14!76;CL:0000839!1.11e-13!70;CL:0000990!1.05e-12!8;CL:0000763!1.19e-10!112;CL:0000049!1.19e-10!112;CL:0000945!3.13e-10!24;CL:0000826!3.13e-10!24;CL:0001014!4.75e-10!2;CL:0001016!4.75e-10!2;CL:0000542!3.43e-09!53;CL:0000051!3.43e-09!53;CL:0000838!7.30e-08!52;CL:0002393!9.34e-08!9;CL:0002397!9.34e-08!9;CL:0000134!4.14e-07!358;CL:0002320!7.88e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.45e-53;5!CL:0000451;1.02e-44;10!CL:0000990;2.04e-35;8!CL:0001014;4.30e-11;2!CL:0001016;4.30e-11;2!CL:0000784;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.91e-53,5;CL:0001029,6.91e-53,5;CL:0000451,9.27e-45,10;CL:0000990,1.79e-35,8;CL:0001014,4.09e-11,2;CL:0001016,4.09e-11,2;CL:0000784,8.29e-08,3;CL:0000738,8.19e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.35e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.34e-22!112;UBERON:0002390!1.36e-20!102;UBERON:0003061!1.36e-20!102;UBERON:0002405!3.33e-19!115;UBERON:0002371!9.66e-17!80;UBERON:0001474!2.92e-15!86;UBERON:0004765!2.49e-12!101;UBERON:0001434!2.49e-12!101;UBERON:0004177!2.16e-10!7;UBERON:0003081!1.40e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.99e-41;2!UBERON:0005058;3.99e-41;2!UBERON:0009113;3.99e-41;2!UBERON:0004177;3.95e-17;5!UBERON:0005057;3.95e-17;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.82e-21,4;UBERON:0005058,3.82e-21,4;UBERON:0009113,3.82e-21,4;UBERON:0003295,3.82e-21,4;UBERON:0005562,3.82e-21,4;UBERON:0003351,1.90e-14,6;UBERON:0004177,1.59e-12,7;UBERON:0005057,1.59e-12,7;UBERON:0000974,4.75e-09,10;UBERON:0003408,4.75e-09,10;UBERON:0001042,4.75e-09,10;UBERON:0009145,4.75e-09,10;UBERON:0006562,2.62e-08,11;UBERON:0009722,2.62e-08,11;UBERON:0007690,2.62e-08,11;UBERON:0002405,1.48e-07,93;UBERON:0002390,3.63e-07,98;UBERON:0003061,3.63e-07,98 | |||
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| ||
|short_description=p5@CD1C | |||
}} | }} |
Latest revision as of 20:26, 17 September 2015
Short description: | p5@CD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD1C_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 247bp_to_ENST00000368170_5end |
EntrezGene: | CD1C |
HGNC: | 1636 |
UniProt: | P29017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.91e-53 | 5 |
common dendritic progenitor | 6.91e-53 | 5 |
dendritic cell | 9.27e-45 | 10 |
conventional dendritic cell | 1.79e-35 | 8 |
CD1a-positive Langerhans cell | 4.09e-11 | 2 |
immature CD1a-positive Langerhans cell | 4.09e-11 | 2 |
plasmacytoid dendritic cell | 8.29e-08 | 3 |
leukocyte | 8.19e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.82e-21 | 4 |
hemolymphoid system gland | 3.82e-21 | 4 |
thymic region | 3.82e-21 | 4 |
pharyngeal gland | 3.82e-21 | 4 |
thymus primordium | 3.82e-21 | 4 |
pharyngeal epithelium | 1.90e-14 | 6 |
hemopoietic organ | 1.59e-12 | 7 |
immune organ | 1.59e-12 | 7 |
neck | 4.75e-09 | 10 |
gland of gut | 4.75e-09 | 10 |
chordate pharynx | 4.75e-09 | 10 |
pharyngeal region of foregut | 4.75e-09 | 10 |
pharynx | 2.62e-08 | 11 |
entire pharyngeal arch endoderm | 2.62e-08 | 11 |
early pharyngeal endoderm | 2.62e-08 | 11 |
immune system | 1.48e-07 | 93 |
hematopoietic system | 3.63e-07 | 98 |
blood island | 3.63e-07 | 98 |