FFCP PHASE1:Hg19::chr6:31106840..31106848,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170680 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17199 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIG4 | |||
|association_with_transcript=278bp_to_ENST00000259845,NM_014069,uc003nso.3_5end | |||
|cluster_id=chr6:31106840..31106848,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_PSORS1C2_5end | |||
|id=chr6:31106840..31106848,- | |||
|ontology_enrichment_celltype=CL:0002159!4.03e-10!13;CL:0000362!4.15e-08!8;CL:0002251!4.75e-08!21;CL:0000312!8.51e-08!5;CL:0000622!9.97e-08!5;CL:0000150!4.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000312;3.83e-19;5!CL:0000240;4.62e-16;6!CL:0000311;4.62e-16;6!CL:0000079;4.62e-16;6!CL:0000237;4.62e-16;6!CL:0002623;5.30e-15;3!CL:0000362;6.61e-11;9!CL:0000622;2.27e-09;5!CL:0000154;5.95e-08;6!CL:0002159;3.40e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.17e-19,5;CL:0000240,3.95e-16,6;CL:0000311,3.95e-16,6;CL:0000079,3.95e-16,6;CL:0000237,3.95e-16,6;CL:0000036,3.95e-16,6;CL:0000357,3.95e-16,6;CL:0000114,3.95e-16,6;CL:0002623,6.10e-15,3;CL:0000362,5.97e-11,9;CL:0000622,2.47e-09,5;CL:0000154,6.38e-08,6;CL:0002159,3.19e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;4.62e-16;6!CL:0000114;4.62e-16;6!UBERON:0004874;4.06e-12;1!UBERON:0000358;5.62e-12;1!UBERON:0009143;1.47e-11;1!UBERON:0008814;9.43e-07;2!UBERON:0010056;9.43e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;6.97e-12;1!DOID:3149;6.97e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.76e-12,1;DOID:3149,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0006562!1.39e-12!11;UBERON:0001042!4.44e-10!10;UBERON:0009145!4.44e-10!10;UBERON:0000166!1.85e-08!21;UBERON:0003127!4.89e-08!2;UBERON:0000161!2.07e-07!35;UBERON:0001004!2.16e-07!72;UBERON:0004119!5.51e-07!169;UBERON:0000925!5.51e-07!169;UBERON:0006595!5.51e-07!169;UBERON:0001003!6.20e-07!14;UBERON:0007376!6.20e-07!14;UBERON:0007383!6.20e-07!14;UBERON:0003102!8.33e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.06e-22;2!UBERON:0005058;2.06e-22;2!UBERON:0009113;2.06e-22;2!UBERON:0001723;2.26e-15;3!UBERON:0001033;2.26e-15;3!UBERON:0007029;2.63e-12;1!UBERON:0000989;4.06e-12;1!UBERON:0008811;4.06e-12;1!UBERON:0002426;9.61e-12;1!UBERON:0003831;9.61e-12;1!UBERON:0003898;9.61e-12;1!UBERON:0004830;9.61e-12;1!UBERON:0003830;9.61e-12;1!UBERON:0005175;9.61e-12;1!UBERON:0001774;9.61e-12;1!UBERON:0001103;9.61e-12;1!UBERON:0000014;1.07e-11;4!UBERON:0001003;2.07e-11;15!UBERON:0007376;2.07e-11;15!UBERON:0004177;1.55e-09;5!UBERON:0005057;1.55e-09;5!UBERON:0000165;2.11e-09;28!UBERON:0010371;2.32e-08;31!UBERON:0001044;5.95e-08;6!UBERON:0003293;5.95e-08;6!UBERON:0003294;5.95e-08;6!UBERON:0010047;5.95e-08;6!UBERON:0003408;5.95e-08;6!UBERON:0000167;5.95e-08;6!UBERON:0001041;2.92e-07;14!UBERON:0002199;5.30e-07;46!UBERON:0002416;5.30e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001042,1.85e-17,10;UBERON:0009145,1.85e-17,10;UBERON:0003408,3.33e-17,10;UBERON:0006562,6.76e-16,11;UBERON:0001723,2.26e-15,3;UBERON:0001033,2.26e-15,3;UBERON:0010056,2.26e-15,3;UBERON:0007029,2.63e-12,1;UBERON:0000989,4.06e-12,1;UBERON:0008811,4.06e-12,1;UBERON:0006258,4.06e-12,1;UBERON:0005876,4.06e-12,1;UBERON:0004874,4.06e-12,1;UBERON:0000166,5.62e-12,22;UBERON:0002426,1.07e-11,1;UBERON:0003831,1.07e-11,1;UBERON:0003898,1.07e-11,1;UBERON:0004830,1.07e-11,1;UBERON:0003830,1.07e-11,1;UBERON:0005175,1.07e-11,1;UBERON:0001774,1.07e-11,1;UBERON:0001103,1.07e-11,1;UBERON:0010084,1.07e-11,1;UBERON:0002370,1.07e-11,4;UBERON:0005058,1.07e-11,4;UBERON:0009113,1.07e-11,4;UBERON:0003295,1.07e-11,4;UBERON:0005562,1.07e-11,4;UBERON:0000014,1.13e-11,4;UBERON:0001003,1.91e-11,15;UBERON:0007376,1.91e-11,15;UBERON:0007383,1.91e-11,15;UBERON:0008814,8.47e-10,18;UBERON:0001557,2.72e-09,19;UBERON:0003102,2.96e-09,99;UBERON:0000165,4.67e-09,29;UBERON:0000930,4.67e-09,29;UBERON:0001004,3.11e-08,74;UBERON:0003351,4.34e-08,6;UBERON:0001044,6.38e-08,6;UBERON:0003293,6.38e-08,6;UBERON:0003294,6.38e-08,6;UBERON:0010047,6.38e-08,6;UBERON:0000167,6.38e-08,6;UBERON:0000153,9.89e-08,62;UBERON:0007811,9.89e-08,62;UBERON:0000161,2.88e-07,36;UBERON:0004177,4.74e-07,7;UBERON:0005057,4.74e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,3.27295344709002,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.97550513735526,3.37205259772859,1.50793458617446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0.197286811273867,0,0,0,0,0,0,0.874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50962739701486,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,1.74580229679155,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01891218839339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.435590032618,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,1.12108865325516,0,0,0,0,0,0,0,0,0,1.0243108625637,27.6503864725637,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,135.999078056559,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9489483196611,5.33842542944378,0,0,0,37.0118471424834,7.1868993227909,0.673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,4.69281884806909,0.122241444182866,0,0,2.41528552309231,0 | |||
|short_description=p1@PSORS1C2 | |||
}} |
Latest revision as of 19:51, 17 September 2015
Short description: | p1@PSORS1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSORS1C2_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 278bp_to_ENST00000259845, NM_014069, uc003nso.3_5end |
EntrezGene: | PSORS1C2 |
HGNC: | 17199 |
UniProt: | Q9UIG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.17e-19 | 5 |
stratified squamous epithelial cell | 3.95e-16 | 6 |
keratin accumulating cell | 3.95e-16 | 6 |
stratified epithelial cell | 3.95e-16 | 6 |
keratinizing barrier epithelial cell | 3.95e-16 | 6 |
epithelial fate stem cell | 3.95e-16 | 6 |
stratified epithelial stem cell | 3.95e-16 | 6 |
surface ectodermal cell | 3.95e-16 | 6 |
acinar cell of salivary gland | 6.10e-15 | 3 |
epidermal cell | 5.97e-11 | 9 |
acinar cell | 2.47e-09 | 5 |
protein secreting cell | 6.38e-08 | 6 |
general ecto-epithelial cell | 3.19e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.76e-12 | 1 |
keratoacanthoma | 7.76e-12 | 1 |