FFCP PHASE1:Hg19::chr9:74864446..74864464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9615 | |EntrezGene=9615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4212 | |HGNC=4212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-166bp_to_AJ420441_5end | |association_with_transcript=-166bp_to_AJ420441_5end | ||
|cluster_id=chr9:74864446..74864464,+ | |||
|coexpression_cluster_id=C4828 | |coexpression_cluster_id=C4828 | ||
|description=CAGE_peak_9_at_GDA_5end | |description=CAGE_peak_9_at_GDA_5end | ||
|id=chr9:74864446..74864464,+ | |id=chr9:74864446..74864464,+ | ||
|ontology_enrichment_celltype=CL:0002150!8.87e-08!3;CL:0000861!8.87e-08!3;CL:0002149!2.56e-07!6;CL:0002255!2.56e-07!6 | |ontology_enrichment_celltype=CL:0002150!8.87e-08!3;CL:0000861!8.87e-08!3;CL:0002149!2.56e-07!6;CL:0002255!2.56e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.64e-09;2!CL:0002178;5.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.44e-09,2;CL:0002178,5.80e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.50e-19!25;DOID:305!5.57e-18!106;DOID:0050687!1.14e-13!143;DOID:14566!1.07e-07!239;DOID:3001!2.56e-07!6;DOID:162!5.74e-07!235 | |ontology_enrichment_disease=DOID:299!2.50e-19!25;DOID:305!5.57e-18!106;DOID:0050687!1.14e-13!143;DOID:14566!1.07e-07!239;DOID:3001!2.56e-07!6;DOID:162!5.74e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3112;5.72e-18;1!DOID:4556;6.50e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,6.23e-18,1;DOID:4556,6.88e-07,3 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000349;3.04e-14;5!UBERON:0001871;1.90e-10;6!UBERON:0002771;9.46e-10;2!UBERON:0001954;9.46e-10;2!UBERON:0003022;9.46e-10;2!UBERON:0002421;9.46e-10;2!UBERON:0002600;9.46e-10;2!UBERON:0001876;1.64e-09;2!UBERON:0002360;1.64e-09;2!UBERON:0000094;1.64e-09;2!UBERON:0010743;1.64e-09;2!UBERON:0002619;4.00e-07;22!UBERON:0005409;4.39e-07;22!UBERON:0002110;9.37e-07;3!UBERON:0002114;9.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,3.15e-14,5;UBERON:0001871,1.85e-10,6;UBERON:0002771,8.69e-10,2;UBERON:0001954,9.46e-10,2;UBERON:0003022,9.46e-10,2;UBERON:0002421,9.46e-10,2;UBERON:0002600,9.46e-10,2;UBERON:0001876,1.71e-09,2;UBERON:0002360,1.86e-09,2;UBERON:0000094,1.86e-09,2;UBERON:0010743,1.86e-09,2;UBERON:0002619,3.96e-07,22;UBERON:0002110,8.62e-07,3;UBERON:0006242,8.62e-07,3 | |||
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| ||
|short_description=p9@GDA | |short_description=p9@GDA | ||
}} | }} |
Latest revision as of 19:41, 17 September 2015
Short description: | p9@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GDA_5end |
Coexpression cluster: | C4828_large_medial_gastric_papillary_embryonic_hippocampus_endometrioid |
Association with transcript: | -166bp_to_AJ420441_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.44e-09 | 2 |
epithelial cell of stomach | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
limbic system | 3.15e-14 | 5 |
temporal lobe | 1.85e-10 | 6 |
middle temporal gyrus | 8.69e-10 | 2 |
Ammon's horn | 9.46e-10 | 2 |
lobe parts of cerebral cortex | 9.46e-10 | 2 |
hippocampal formation | 9.46e-10 | 2 |
limbic lobe | 9.46e-10 | 2 |
amygdala | 1.71e-09 | 2 |
meninx | 1.86e-09 | 2 |
membrane organ | 1.86e-09 | 2 |
meningeal cluster | 1.86e-09 | 2 |
regional part of cerebral cortex | 3.96e-07 | 22 |
gallbladder | 8.62e-07 | 3 |
gall bladder primordium | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 6.23e-18 | 1 |
lung large cell carcinoma | 6.88e-07 | 3 |