FFCP PHASE1:Hg19::chr13:52733584..52733601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4752 | |EntrezGene=4752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7746 | |HGNC=7746 | ||
|TSSclassifier=strong | |||
|UniProt=F8VV00,P51956,Q6ZN64 | |UniProt=F8VV00,P51956,Q6ZN64 | ||
|association_with_transcript=68bp_to_ENST00000550841,NM_152720_5end | |association_with_transcript=68bp_to_ENST00000550841,NM_152720_5end | ||
|cluster_id=chr13:52733584..52733601,- | |||
|description=CAGE_peak_6_at_NEK3_5end | |description=CAGE_peak_6_at_NEK3_5end | ||
|id=chr13:52733584..52733601,- | |id=chr13:52733584..52733601,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;7.30e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.30e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0009117;5.83e-11;10!UBERON:0005564;5.83e-11;10!UBERON:0003056;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.57e-13!34;UBERON:0002780!1.39e-12!41;UBERON:0001890!1.39e-12!41;UBERON:0006240!1.39e-12!41;UBERON:0001869!2.77e-12!32;UBERON:0003080!3.72e-12!42;UBERON:0002791!4.60e-12!33;UBERON:0000073!2.29e-11!94;UBERON:0001016!2.29e-11!94;UBERON:0001049!1.18e-10!57;UBERON:0005068!1.18e-10!57;UBERON:0006241!1.18e-10!57;UBERON:0007135!1.18e-10!57;UBERON:0002616!4.35e-10!59;UBERON:0002020!4.51e-10!34;UBERON:0003528!4.51e-10!34;UBERON:0001017!1.56e-09!82;UBERON:0000955!1.75e-09!69;UBERON:0006238!1.75e-09!69;UBERON:0005743!9.23e-09!86;UBERON:0002619!2.16e-08!22;UBERON:0000956!2.30e-08!25;UBERON:0000203!2.30e-08!25;UBERON:0001950!6.20e-08!20;UBERON:0003056!1.18e-07!61;UBERON:0007023!2.59e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0006955;7.30e-14;2!UBERON:0004801;7.30e-14;2!UBERON:0003714;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0000473;1.88e-13;8!UBERON:0003135;4.73e-10;11!UBERON:0002114;1.47e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0006955,7.30e-14,2;UBERON:0004801,7.30e-14,2;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0000473,2.20e-13,8;UBERON:0003135,5.29e-10,11;UBERON:0002114,1.67e-09,2;UBERON:0001781,1.69e-07,4 | |||
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| ||
|short_description=p6@NEK3 | |short_description=p6@NEK3 | ||
}} | }} |
Latest revision as of 19:25, 17 September 2015
Short description: | p6@NEK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000550841, NM_152720_5end |
EntrezGene: | NEK3 |
HGNC: | 7746 |
UniProt: | F8VV00P51956Q6ZN64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
uterine epithelium | 7.30e-14 | 2 |
cervix epithelium | 7.30e-14 | 2 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
testis | 2.20e-13 | 8 |
male reproductive organ | 5.29e-10 | 11 |
duodenum | 1.67e-09 | 2 |
layer of retina | 1.69e-07 | 4 |