FFCP PHASE1:Hg19::chr3:21584230..21584243,+: Difference between revisions
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|id=chr3:21584230..21584243,+
|short_description=p3@ZNF385D-AS1
|description=CAGE_peak_3_at_ZNF385D-AS1_5end
|association_with_transcript=-64bp_to_ENST00000412369_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41136 | |HGNC=41136 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-64bp_to_ENST00000412369_5end | |||
|cluster_id=chr3:21584230..21584243,+ | |||
|coexpression_cluster_id=C4321 | |||
|description=CAGE_peak_3_at_ZNF385D-AS1_5end | |||
|id=chr3:21584230..21584243,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.81e-25!5;CL:0000039!3.55e-12!7;CL:0000586!3.55e-12!7;CL:0000540!7.43e-08!6;CL:0000031!7.43e-08!6;CL:0000404!7.43e-08!6;CL:0002178!1.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.05e-30;5!CL:0000039;3.11e-22;7!CL:0000586;3.11e-22;7!CL:0002321;2.06e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.14e-30,5;CL:0000039,2.72e-22,7;CL:0000586,2.72e-22,7;CL:0000763,3.22e-07,108;CL:0000049,3.22e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.20e-15;10!UBERON:0005564;1.20e-15;10 | |||
|ontology_enrichment_disease=DOID:8692!9.84e-18!31;DOID:1240!2.78e-16!39;DOID:2531!3.08e-16!51;DOID:0060083!3.08e-16!51;DOID:1036!1.80e-10!8;DOID:0050686!9.49e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.81e-29;31!DOID:1240;1.95e-21;39!DOID:2531;2.20e-11;51!DOID:0060083;2.20e-11;51!DOID:1036;2.39e-11;8!DOID:3095;6.57e-11;22!DOID:2994;6.57e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.28e-29,31;DOID:1240,8.96e-23,39;DOID:2531,4.38e-17,51;DOID:0060083,4.38e-17,51;DOID:1036,1.87e-11,8;DOID:3095,6.23e-11,22;DOID:2994,6.23e-11,22;DOID:0050686,5.41e-08,137;DOID:162,9.23e-08,235;DOID:14566,1.52e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.08e-22!8;UBERON:0003135!1.99e-21!11;UBERON:0003101!2.99e-10!22;UBERON:0000079!2.99e-10!22;UBERON:0000991!4.27e-08!21;UBERON:0009196!4.27e-08!21;UBERON:0009117!4.27e-08!21;UBERON:0005564!4.27e-08!21;UBERON:0004176!1.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.72e-19;8!UBERON:0003135;3.01e-14;11!UBERON:0000922;4.35e-08;49!UBERON:0000991;1.52e-07;21!UBERON:0003101;3.30e-07;22!UBERON:0000079;3.30e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.52e-19,8;UBERON:0003135,2.77e-14,11;UBERON:0000991,1.45e-07,21;UBERON:0009196,1.45e-07,21;UBERON:0009117,1.45e-07,21;UBERON:0005564,1.45e-07,21;UBERON:0004176,3.16e-07,22;UBERON:0003101,3.16e-07,22;UBERON:0000079,3.16e-07,22 | |||
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|short_description=p3@ZNF385D-AS1 | |||
}} | }} |
Latest revision as of 18:52, 17 September 2015
Short description: | p3@ZNF385D-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF385D-AS1_5end |
Coexpression cluster: | C4321_teratocarcinoma_testicular_acute_chronic_H9_iPS_adult |
Association with transcript: | -64bp_to_ENST00000412369_5end |
EntrezGene: | NA |
HGNC: | 41136 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.14e-30 | 5 |
germ line cell | 2.72e-22 | 7 |
germ cell | 2.72e-22 | 7 |
myeloid cell | 3.22e-07 | 108 |
common myeloid progenitor | 3.22e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
testis | 1.52e-19 | 8 |
male reproductive organ | 2.77e-14 | 11 |
gonad | 1.45e-07 | 21 |
indifferent external genitalia | 1.45e-07 | 21 |
indifferent gonad | 1.45e-07 | 21 |
gonad primordium | 1.45e-07 | 21 |
external genitalia | 3.16e-07 | 22 |
male organism | 3.16e-07 | 22 |
male reproductive system | 3.16e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.28e-29 | 31 |
leukemia | 8.96e-23 | 39 |
hematologic cancer | 4.38e-17 | 51 |
immune system cancer | 4.38e-17 | 51 |
chronic leukemia | 1.87e-11 | 8 |
germ cell and embryonal cancer | 6.23e-11 | 22 |
germ cell cancer | 6.23e-11 | 22 |
organ system cancer | 5.41e-08 | 137 |
cancer | 9.23e-08 | 235 |
disease of cellular proliferation | 1.52e-07 | 239 |