FFCP PHASE1:Hg19::chr19:3772220..3772236,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84839 | |EntrezGene=84839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18286 | |HGNC=18286 | ||
|TSSclassifier=strong | |||
|UniProt=G3V243 | |UniProt=G3V243 | ||
|association_with_transcript=0bp_to_ENST00000555633_5end | |association_with_transcript=0bp_to_ENST00000555633_5end | ||
|cluster_id=chr19:3772220..3772236,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_RAX2_5end | |description=CAGE_peak_1_at_RAX2_5end | ||
|id=chr19:3772220..3772236,- | |id=chr19:3772220..3772236,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.80e-07,4;CL:0002222,1.80e-07,4;CL:0002224,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.66e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003296!9.51e-41!4;UBERON:0010133!9.51e-41!4;UBERON:0001894!1.89e-23!7;UBERON:0006222!1.89e-23!7;UBERON:0001905!1.25e-21!2;UBERON:0002757!1.25e-21!2;UBERON:0010134!1.25e-21!2;UBERON:0002784!1.25e-21!2;UBERON:0005408!1.25e-21!2;UBERON:0001899!1.25e-21!2;UBERON:0000007!5.76e-21!2;UBERON:0003075!9.01e-15!86;UBERON:0007284!9.01e-15!86;UBERON:0002346!4.83e-14!90;UBERON:0000073!5.54e-13!94;UBERON:0001016!5.54e-13!94;UBERON:0000970!1.16e-12!20;UBERON:0005743!3.95e-12!86;UBERON:0002104!4.71e-12!21;UBERON:0003056!5.59e-12!61;UBERON:0006834!2.42e-11!1;UBERON:0000020!5.39e-11!23;UBERON:0002336!6.00e-11!1;UBERON:0001018!6.00e-11!1;UBERON:0002473!6.00e-11!1;UBERON:0005340!6.00e-11!1;UBERON:0002316!6.00e-11!1;UBERON:0003544!6.00e-11!1;UBERON:0001020!6.00e-11!1;UBERON:0005970!6.00e-11!1;UBERON:0002437!6.00e-11!1;UBERON:0001032!1.57e-10!24;UBERON:0004456!1.57e-10!24;UBERON:0001017!1.79e-10!82;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0000033!1.10e-09!123;UBERON:0000966!3.25e-09!5;UBERON:0005388!3.25e-09!5;UBERON:0001802!3.25e-09!5;UBERON:0004121!3.38e-09!169;UBERON:0000153!3.73e-09!129;UBERON:0007811!3.73e-09!129;UBERON:0000924!6.14e-09!173;UBERON:0006601!6.14e-09!173;UBERON:0007023!7.38e-09!115;UBERON:0000019!8.61e-09!19;UBERON:0000047!8.61e-09!19;UBERON:0004088!8.61e-09!19;UBERON:0003072!8.61e-09!19;UBERON:0003071!8.61e-09!19;UBERON:0004128!8.61e-09!19;UBERON:0001456!5.73e-08!21;UBERON:0001049!9.85e-08!57;UBERON:0005068!9.85e-08!57;UBERON:0006241!9.85e-08!57;UBERON:0007135!9.85e-08!57;UBERON:0002616!1.88e-07!59 | |ontology_enrichment_uberon=UBERON:0003296!9.51e-41!4;UBERON:0010133!9.51e-41!4;UBERON:0001894!1.89e-23!7;UBERON:0006222!1.89e-23!7;UBERON:0001905!1.25e-21!2;UBERON:0002757!1.25e-21!2;UBERON:0010134!1.25e-21!2;UBERON:0002784!1.25e-21!2;UBERON:0005408!1.25e-21!2;UBERON:0001899!1.25e-21!2;UBERON:0000007!5.76e-21!2;UBERON:0003075!9.01e-15!86;UBERON:0007284!9.01e-15!86;UBERON:0002346!4.83e-14!90;UBERON:0000073!5.54e-13!94;UBERON:0001016!5.54e-13!94;UBERON:0000970!1.16e-12!20;UBERON:0005743!3.95e-12!86;UBERON:0002104!4.71e-12!21;UBERON:0003056!5.59e-12!61;UBERON:0006834!2.42e-11!1;UBERON:0000020!5.39e-11!23;UBERON:0002336!6.00e-11!1;UBERON:0001018!6.00e-11!1;UBERON:0002473!6.00e-11!1;UBERON:0005340!6.00e-11!1;UBERON:0002316!6.00e-11!1;UBERON:0003544!6.00e-11!1;UBERON:0001020!6.00e-11!1;UBERON:0005970!6.00e-11!1;UBERON:0002437!6.00e-11!1;UBERON:0001032!1.57e-10!24;UBERON:0004456!1.57e-10!24;UBERON:0001017!1.79e-10!82;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0000033!1.10e-09!123;UBERON:0000966!3.25e-09!5;UBERON:0005388!3.25e-09!5;UBERON:0001802!3.25e-09!5;UBERON:0004121!3.38e-09!169;UBERON:0000153!3.73e-09!129;UBERON:0007811!3.73e-09!129;UBERON:0000924!6.14e-09!173;UBERON:0006601!6.14e-09!173;UBERON:0007023!7.38e-09!115;UBERON:0000019!8.61e-09!19;UBERON:0000047!8.61e-09!19;UBERON:0004088!8.61e-09!19;UBERON:0003072!8.61e-09!19;UBERON:0003071!8.61e-09!19;UBERON:0004128!8.61e-09!19;UBERON:0001456!5.73e-08!21;UBERON:0001049!9.85e-08!57;UBERON:0005068!9.85e-08!57;UBERON:0006241!9.85e-08!57;UBERON:0007135!9.85e-08!57;UBERON:0002616!1.88e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.88e-50;2!UBERON:0002757;1.88e-50;2!UBERON:0010134;1.88e-50;2!UBERON:0005408;1.88e-50;2!UBERON:0001899;1.88e-50;2!UBERON:0003296;7.64e-26;4!UBERON:0010133;7.64e-26;4!UBERON:0002784;7.64e-26;4!UBERON:0000966;6.65e-21;5!UBERON:0005388;6.65e-21;5!UBERON:0001802;6.65e-21;5!UBERON:0000970;2.67e-20;20!UBERON:0002104;2.32e-19;21!UBERON:0000020;1.00e-17;23!UBERON:0001032;5.22e-17;24!UBERON:0004456;5.22e-17;24!UBERON:0001894;3.06e-15;7!UBERON:0002360;1.37e-13;2!UBERON:0000094;1.37e-13;2!UBERON:0010743;1.37e-13;2!UBERON:0000019;1.84e-12;19!UBERON:0000047;1.84e-12;19!UBERON:0004088;1.84e-12;19!UBERON:0010230;1.84e-12;19!UBERON:0001456;2.43e-11;21!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.88e-50,2;UBERON:0002757,1.88e-50,2;UBERON:0010134,1.88e-50,2;UBERON:0005408,1.88e-50,2;UBERON:0001899,1.88e-50,2;UBERON:0003296,7.64e-26,4;UBERON:0010133,7.64e-26,4;UBERON:0002784,7.64e-26,4;UBERON:0000970,2.32e-19,21;UBERON:0002104,2.32e-19,21;UBERON:0000966,1.33e-17,6;UBERON:0005388,1.33e-17,6;UBERON:0001802,1.33e-17,6;UBERON:0000020,5.22e-17,24;UBERON:0001032,5.22e-17,24;UBERON:0004456,5.22e-17,24;UBERON:0001894,3.06e-15,7;UBERON:0006222,3.06e-15,7;UBERON:0002360,1.37e-13,2;UBERON:0000094,1.37e-13,2;UBERON:0010743,1.37e-13,2;UBERON:0000019,7.13e-12,20;UBERON:0000047,7.13e-12,20;UBERON:0010312,7.13e-12,20;UBERON:0004088,7.13e-12,20;UBERON:0010230,7.13e-12,20;UBERON:0003072,7.13e-12,20;UBERON:0004128,7.13e-12,20;UBERON:0003071,7.13e-12,20;UBERON:0001456,7.41e-11,22;UBERON:0003056,2.77e-10,61;UBERON:0005085,6.85e-08,31;UBERON:0003075,9.98e-08,82;UBERON:0007284,9.98e-08,82;UBERON:0010077,1.80e-07,4;UBERON:0005389,1.80e-07,4;UBERON:0000484,1.80e-07,4;UBERON:0002546,1.80e-07,4;UBERON:0000965,1.80e-07,4;UBERON:0001803,1.80e-07,4;UBERON:0003073,1.80e-07,4;UBERON:0005426,1.80e-07,4;UBERON:0002346,2.23e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40535538905292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.2569896441138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.1765919046476,72.9735677214848,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,44.101027756997,95.9142623217651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40535538905292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.2569896441138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.1765919046476,72.9735677214848,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,44.101027756997,95.9142623217651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p1@RAX2 | |short_description=p1@RAX2 | ||
}} | }} |
Latest revision as of 17:46, 17 September 2015
Short description: | p1@RAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAX2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000555633_5end |
EntrezGene: | RAX2 |
HGNC: | 18286 |
UniProt: | G3V243 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.80e-07 | 4 |
vertebrate lens cell | 1.80e-07 | 4 |
lens epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.04e-07 | 4 |