FFCP PHASE1:Hg19::chr2:158345440..158345449,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9595 | |EntrezGene=9595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9506 | |HGNC=9506 | ||
|TSSclassifier=strong | |||
|UniProt=C9JRF8 | |UniProt=C9JRF8 | ||
|association_with_transcript=22bp_to_ENST00000439355_5end | |association_with_transcript=22bp_to_ENST00000439355_5end | ||
|cluster_id=chr2:158345440..158345449,- | |||
|description=CAGE_peak_9_at_CYTIP_5end | |description=CAGE_peak_9_at_CYTIP_5end | ||
|id=chr2:158345440..158345449,- | |id=chr2:158345440..158345449,- | ||
|ontology_enrichment_celltype=CL:0000313;1.21e-40;1!CL:0000159;4.21e-21;2!CL:0002602;6.30e-21;2!CL:0002564;1.22e-14;3!CL:0000082;2.36e-09;19 | |ontology_enrichment_celltype=CL:0002602!6.28e-14!2;CL:0002564!1.09e-09!3;CL:0000313!4.57e-08!1;CL:0002174!1.01e-07!1;CL:0000501!1.01e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.21e-40;1!CL:0000159;4.21e-21;2!CL:0002602;6.30e-21;2!CL:0002564;1.22e-14;3!CL:0000082;2.36e-09;19 | ||
|ontology_enrichment_disease=DOID:2152;1.21e-40;1!DOID:3905;1.48e-18;9!DOID:4556;1.50e-14;3!DOID:1324;1.42e-11;15!DOID:5409;3.60e-11;4!DOID:0050615;6.45e-11;16!DOID:3908;2.86e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |ontology_enrichment_celltype_v019_2=CL:0000313,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0002602,6.96e-21,2;CL:0002564,1.22e-14,3;CL:0000082,2.36e-09,19 | ||
|ontology_enrichment_uberon=UBERON:0004911;1.21e-40;1!UBERON:0011135;1.57e-32;5!UBERON:0002216;1.57e-32;5!UBERON:0011134;1.57e-32;5!UBERON:0002209;1.57e-32;5!UBERON:0002213;1.57e-32;5!UBERON:0007844;1.57e-32;5!UBERON:0011138;1.57e-32;5!UBERON:0001130;1.57e-32;5!UBERON:0001066;1.57e-32;5!UBERON:0001468;1.57e-32;5!UBERON:0004909;4.21e-21;2!UBERON:0006444;6.30e-21;2!UBERON:0001995;6.30e-21;2!UBERON:0004715;6.30e-21;2!UBERON:0004905;8.54e-21;8!UBERON:0000982;8.54e-21;8!UBERON:0004770;8.54e-21;8!UBERON:0002242;1.22e-14;3!UBERON:0002418;1.96e-14;3!UBERON:0004755;1.96e-14;3!UBERON:0000075;5.99e-11;16!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22!UBERON:0004765;4.08e-07;26 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!4.57e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.21e-40;1!DOID:3905;1.48e-18;9!DOID:4556;1.50e-14;3!DOID:1324;1.42e-11;15!DOID:5409;3.60e-11;4!DOID:0050615;6.45e-11;16!DOID:3908;2.86e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.91e-41,1;DOID:3905,1.48e-18,9;DOID:4556,1.60e-14,3;DOID:1324,1.42e-11,15;DOID:5409,3.42e-11,4;DOID:0050615,6.45e-11,16;DOID:3908,2.97e-09,5;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0009568!6.28e-14!2;UBERON:0002216!6.28e-14!2;UBERON:0002209!6.28e-14!2;UBERON:0002213!6.28e-14!2;UBERON:0004267!6.28e-14!2;UBERON:0006444!6.28e-14!2;UBERON:0001995!6.28e-14!2;UBERON:0004715!6.28e-14!2;UBERON:0001468!6.28e-14!2;UBERON:0001130!6.28e-14!2;UBERON:0001066!6.28e-14!2;UBERON:0003586!2.96e-12!5;UBERON:0002242!1.09e-09!3;UBERON:0003068!1.09e-09!3;UBERON:0002328!1.09e-09!3;UBERON:0004880!1.09e-09!3;UBERON:0002418!1.40e-09!3;UBERON:0004755!1.40e-09!3;UBERON:0004911!4.57e-08!1;UBERON:0001831!8.28e-08!1;UBERON:0001567!8.28e-08!1;UBERON:0008801!8.28e-08!1;UBERON:0001282!1.15e-07!1;UBERON:0009842!1.15e-07!1;UBERON:0003704!1.15e-07!1;UBERON:0001171!1.15e-07!1;UBERON:0001172!1.15e-07!1;UBERON:0002902!2.98e-07!1;UBERON:0009899!2.98e-07!1;UBERON:0002108!6.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.21e-40;1!UBERON:0011135;1.57e-32;5!UBERON:0002216;1.57e-32;5!UBERON:0011134;1.57e-32;5!UBERON:0002209;1.57e-32;5!UBERON:0002213;1.57e-32;5!UBERON:0007844;1.57e-32;5!UBERON:0011138;1.57e-32;5!UBERON:0001130;1.57e-32;5!UBERON:0001066;1.57e-32;5!UBERON:0001468;1.57e-32;5!UBERON:0004909;4.21e-21;2!UBERON:0006444;6.30e-21;2!UBERON:0001995;6.30e-21;2!UBERON:0004715;6.30e-21;2!UBERON:0004905;8.54e-21;8!UBERON:0000982;8.54e-21;8!UBERON:0004770;8.54e-21;8!UBERON:0002242;1.22e-14;3!UBERON:0002418;1.96e-14;3!UBERON:0004755;1.96e-14;3!UBERON:0000075;5.99e-11;16!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22!UBERON:0004765;4.08e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.91e-41,1;UBERON:0011135,1.70e-32,5;UBERON:0002216,1.70e-32,5;UBERON:0011134,1.70e-32,5;UBERON:0002209,1.70e-32,5;UBERON:0002213,1.70e-32,5;UBERON:0005856,1.70e-32,5;UBERON:0005866,1.70e-32,5;UBERON:0005863,1.70e-32,5;UBERON:0007844,1.70e-32,5;UBERON:0011138,1.70e-32,5;UBERON:0001130,1.70e-32,5;UBERON:0001066,1.70e-32,5;UBERON:0001468,1.70e-32,5;UBERON:0004909,3.81e-21,2;UBERON:0006444,6.96e-21,2;UBERON:0001995,6.96e-21,2;UBERON:0004715,6.96e-21,2;UBERON:0004905,8.98e-21,8;UBERON:0000982,8.98e-21,8;UBERON:0004770,8.98e-21,8;UBERON:0002242,1.22e-14,3;UBERON:0003068,1.22e-14,3;UBERON:0002328,1.22e-14,3;UBERON:0004880,1.22e-14,3;UBERON:0002418,2.09e-14,3;UBERON:0004755,2.09e-14,3;UBERON:0000075,6.14e-11,16;UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0002048,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,4.50153468953709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33073541132698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,2.34896406775364,0,0.121917924982269,0,0,0,0,0,0,0,0,0,1.81155412280008,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,4.50153468953709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33073541132698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,2.34896406775364,0,0.121917924982269,0,0,0,0,0,0,0,0,0,1.81155412280008,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p9@CYTIP | |short_description=p9@CYTIP | ||
}} | }} |
Latest revision as of 17:45, 17 September 2015
Short description: | p9@CYTIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CYTIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000439355_5end |
EntrezGene: | CYTIP |
HGNC: | 9506 |
UniProt: | C9JRF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.91e-41 | 1 |
seromucus secreting cell | 3.81e-21 | 2 |
annulus pulposus cell | 6.96e-21 | 2 |
nucleus pulposus cell of intervertebral disc | 1.22e-14 | 3 |
epithelial cell of lung | 2.36e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.91e-41 | 1 |
lung carcinoma | 1.48e-18 | 9 |
lung large cell carcinoma | 1.60e-14 | 3 |
lung cancer | 1.42e-11 | 15 |
lung small cell carcinoma | 3.42e-11 | 4 |
respiratory system cancer | 6.45e-11 | 16 |
non-small cell lung carcinoma | 2.97e-09 | 5 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |