FFCP PHASE1:Hg19::chr1:34630779..34630790,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:34630779..34630790,- to FFCP PHASE1:Hg19::chr1:34630779..34630790,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114784 | |EntrezGene=114784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |HGNC=19290 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=84bp_to_ENST00000373381,uc001bxm.1_5end | |||
|cluster_id=chr1:34630779..34630790,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_CSMD2_5end | |||
|id=chr1:34630779..34630790,- | |||
|ontology_enrichment_celltype=CL:0000133!4.24e-11!59;CL:0002319!3.36e-10!25;CL:0000047!1.88e-09!8;CL:0000055!4.44e-09!180;CL:0000221!9.90e-09!71;CL:0000540!2.35e-07!6;CL:0000031!2.35e-07!6;CL:0000404!2.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.05e-12;6!CL:0000404;9.05e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.10e-17,8;CL:0000540,7.65e-12,6;CL:0000031,7.65e-12,6;CL:0000404,7.65e-12,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.05e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.46e-35!94;UBERON:0001016!1.46e-35!94;UBERON:0001017!2.53e-34!82;UBERON:0005743!3.06e-34!86;UBERON:0001049!1.21e-28!57;UBERON:0005068!1.21e-28!57;UBERON:0006241!1.21e-28!57;UBERON:0007135!1.21e-28!57;UBERON:0002346!2.97e-25!90;UBERON:0000955!4.56e-25!69;UBERON:0006238!4.56e-25!69;UBERON:0003075!5.46e-24!86;UBERON:0007284!5.46e-24!86;UBERON:0002020!1.75e-23!34;UBERON:0003528!1.75e-23!34;UBERON:0001893!3.66e-23!34;UBERON:0002616!1.42e-22!59;UBERON:0002791!2.69e-22!33;UBERON:0000924!5.22e-22!173;UBERON:0006601!5.22e-22!173;UBERON:0001869!1.12e-21!32;UBERON:0004121!7.99e-21!169;UBERON:0002780!5.27e-20!41;UBERON:0001890!5.27e-20!41;UBERON:0006240!5.27e-20!41;UBERON:0003080!3.01e-19!42;UBERON:0000956!2.88e-17!25;UBERON:0000203!2.88e-17!25;UBERON:0003056!2.52e-15!61;UBERON:0002619!2.62e-15!22;UBERON:0000033!1.78e-14!123;UBERON:0001950!1.26e-13!20;UBERON:0000153!1.63e-13!129;UBERON:0007811!1.63e-13!129;UBERON:0000475!3.01e-12!365;UBERON:0003076!1.02e-10!15;UBERON:0003057!1.02e-10!15;UBERON:0007023!4.92e-10!115;UBERON:0004732!4.13e-09!13;UBERON:0004733!3.12e-08!12;UBERON:0002028!3.12e-08!12;UBERON:0007277!3.12e-08!12;UBERON:0000025!3.32e-08!194;UBERON:0000064!1.10e-07!219;UBERON:0002308!1.13e-07!9;UBERON:0000125!1.13e-07!9;UBERON:0000468!2.66e-07!659;UBERON:0002199!8.35e-07!45;UBERON:0002416!8.35e-07!45;UBERON:0002021!9.29e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.54e-34;32!UBERON:0003528;3.39e-32;34!UBERON:0002020;3.39e-32;34!UBERON:0002619;1.13e-31;22!UBERON:0002791;2.06e-31;32!UBERON:0001893;2.90e-31;34!UBERON:0001950;7.42e-31;20!UBERON:0000956;1.78e-27;25!UBERON:0000203;1.78e-27;25!UBERON:0002780;5.25e-21;41!UBERON:0001890;5.25e-21;41!UBERON:0000073;6.19e-16;53!UBERON:0002616;6.19e-16;53!UBERON:0002021;2.00e-14;5!UBERON:0000125;2.33e-13;9!UBERON:0002308;2.33e-13;9!UBERON:0001017;3.43e-13;75!UBERON:0001016;4.66e-12;83!UBERON:0000200;1.16e-11;6!UBERON:0000955;1.87e-11;68!UBERON:0000369;1.03e-10;4!UBERON:0002435;1.03e-10;4!UBERON:0000204;1.03e-10;4!UBERON:0001871;4.68e-10;6!UBERON:0002420;6.37e-10;9!UBERON:0007245;6.37e-10;9!UBERON:0010009;6.37e-10;9!UBERON:0010011;6.37e-10;9!UBERON:0000454;6.37e-10;9!UBERON:0009663;3.58e-09;7!UBERON:0005383;1.88e-08;3!UBERON:0005382;1.88e-08;3!UBERON:0002771;6.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.72e-40,34;UBERON:0002020,5.72e-40,34;UBERON:0001869,7.17e-39,32;UBERON:0001017,8.69e-39,81;UBERON:0001893,2.84e-36,34;UBERON:0001016,4.98e-36,89;UBERON:0002791,1.60e-35,32;UBERON:0001049,2.30e-33,56;UBERON:0005068,2.30e-33,56;UBERON:0006241,2.30e-33,56;UBERON:0007135,2.30e-33,56;UBERON:0002619,9.53e-32,22;UBERON:0001950,5.73e-31,20;UBERON:0000073,2.31e-30,53;UBERON:0002616,2.31e-30,53;UBERON:0002780,3.90e-29,41;UBERON:0001890,3.90e-29,41;UBERON:0003080,3.90e-29,41;UBERON:0006240,3.90e-29,41;UBERON:0000956,1.54e-27,25;UBERON:0000203,1.54e-27,25;UBERON:0002346,5.88e-26,86;UBERON:0000955,1.33e-25,68;UBERON:0006238,1.33e-25,68;UBERON:0003075,1.40e-25,82;UBERON:0007284,1.40e-25,82;UBERON:0010371,2.04e-21,104;UBERON:0003056,3.37e-21,61;UBERON:0004121,9.97e-20,171;UBERON:0000924,9.97e-20,171;UBERON:0006601,9.97e-20,171;UBERON:0010314,8.49e-19,132;UBERON:0002021,1.44e-14,5;UBERON:0000125,6.44e-14,9;UBERON:0002308,6.44e-14,9;UBERON:0011216,2.29e-13,223;UBERON:0007023,2.98e-13,114;UBERON:0000200,2.16e-11,6;UBERON:0000369,4.23e-11,4;UBERON:0002435,4.23e-11,4;UBERON:0000204,4.23e-11,4;UBERON:0010082,4.23e-11,4;UBERON:0000025,4.09e-10,192;UBERON:0002420,4.59e-10,9;UBERON:0007245,4.59e-10,9;UBERON:0010009,4.59e-10,9;UBERON:0010011,4.59e-10,9;UBERON:0000454,4.59e-10,9;UBERON:0001871,5.22e-10,6;UBERON:0009663,2.07e-09,7;UBERON:0005383,6.75e-09,3;UBERON:0005382,6.75e-09,3;UBERON:0004111,5.99e-07,240;UBERON:0002771,6.63e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.986680828671798,0,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,2.1185468930115,0.286836620748814,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0.323745888736263,0.561803226808994,0,0,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0.717558542755448,0.213557388818567,0.635795703478686,0.600182192168805,0.103052529238439,0.257640540045629,0,2.53164498361899,0.194874010322397,1.00973509697646,0.368199594569197,0,1.06502877754984,0.403008392910561,0.67824236924195,0,0,0,0.609868530647977,0.530119073285941,0.116193942869518,0.621966330092223,0.756962552626885,1.45990943630332,0,3.21620469096443,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.899756920638513,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,1.77866236955724,3.90419561572865,3.86644406388848,1.00509759200609,2.55175500661265,0,0,0,0.36807447515742,0,0,1.03985430765404,0.892144943985809,0.315404830067869,0,0.300946099727719,0,0,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.512556597022804,0,0.64341568457443,0,0.154209693802656,0.887808626565635,0.246381468041427,0,0,0,0.200506470303285,0,1.14814448164607,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0.94443704049192,2.0911118104818,0,0.532306030317022,0,0.74129687641568,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.808729926293264,1.58510321173008,0.421258456238981,0,0,0,0,0.141405431953713,2.26016233240486,0,2.65375590096488,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0.7133421029625,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0.988823245360557,0.211125408127993,0.398495976502139,1.10513566212459,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,9.98068990005971,0,0,0,0,0,0,1.37897349296586,0,0.694499979733169,1.77148277162768,1.68835014075571,1.52581736317083,1.43753037910592,0.591095237907095,0,0,1.11538995422883,0,0.91153644677601,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.808813595768125,0.802577647298789,0.468528891450678,0,0,0,0,0,5.81538247097931,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,1.7727022867646,0,0,1.28071796843612,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,1.23214841002794,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.17925449778521,2.57205037544031,1.78801267576404,0.83088067605837,0,0,1.33649024647654,1.34173875039706,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,1.62899880526114,0,2.28611152076586,0,0,0.170388021785422,0,0,0,1.93924434542326,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19647276823534,2.1282458220105,0.573409195690071,0.887432412294818,0.683060432355218,0,0.124980407962107,0,0,0.235265819698172,0,0.869526171664951,0.447764408660622,0.233713309847224,0,0,0,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.797525143673985,1.04349012362347,0.450772826991655,3.80805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.107824811396682,0,0.109209638192014,0,6.80239744325385,0.371807292777007,0,0.636008701306837,0,0,0,0,1.22035527683273,1.41696576325585,3.03304332208587,2.05116364240755,15.6284451657465,1.86724581653388,2.58361033010962,1.42769420259154,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,1.14813893851271,0,2.89361515101658,0.887821342714695,15.8622694615284,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.679697329768317,1.11813715056843,0,0,0,1.57115589916002,0,0.913158720509496,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879524133963433,0.603851374266694,0,0,0,0,0,1.17785080268967,0.594092800654172,6.339835913751,0.169927114687817,0.0939839179798536,0,0,0,0,0,1.4606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| ||
|short_description=p4@CSMD2 | |||
}} | }} |
Latest revision as of 17:37, 17 September 2015
Short description: | p4@CSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSMD2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 84bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.10e-17 | 8 |
neuron | 7.65e-12 | 6 |
neuroblast | 7.65e-12 | 6 |
electrically signaling cell | 7.65e-12 | 6 |