FFCP PHASE1:Hg19::chr2:55253582..55253618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |UniProt=Q9NQC3 | ||
|association_with_transcript=173bp_to_AF063601_5end | |association_with_transcript=173bp_to_AF063601_5end | ||
|cluster_id=chr2:55253582..55253618,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_21_at_RTN4_5end | |description=CAGE_peak_21_at_RTN4_5end | ||
|id=chr2:55253582..55253618,- | |id=chr2:55253582..55253618,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.12e-11;3!UBERON:0003057;1.12e-11;3!UBERON:0006601;2.26e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-25!82;UBERON:0005743!4.91e-24!86;UBERON:0001049!6.95e-24!57;UBERON:0005068!6.95e-24!57;UBERON:0006241!6.95e-24!57;UBERON:0007135!6.95e-24!57;UBERON:0000073!1.62e-23!94;UBERON:0001016!1.62e-23!94;UBERON:0002020!8.75e-21!34;UBERON:0003528!8.75e-21!34;UBERON:0001893!1.34e-20!34;UBERON:0002791!6.04e-20!33;UBERON:0002780!1.98e-19!41;UBERON:0001890!1.98e-19!41;UBERON:0006240!1.98e-19!41;UBERON:0000955!2.93e-19!69;UBERON:0006238!2.93e-19!69;UBERON:0001869!5.08e-19!32;UBERON:0003080!1.28e-18!42;UBERON:0002616!3.44e-18!59;UBERON:0003075!6.04e-17!86;UBERON:0007284!6.04e-17!86;UBERON:0007023!6.84e-17!115;UBERON:0001950!3.22e-16!20;UBERON:0002346!5.70e-16!90;UBERON:0002619!8.72e-16!22;UBERON:0000956!1.07e-15!25;UBERON:0000203!1.07e-15!25;UBERON:0003056!7.92e-14!61;UBERON:0004121!4.61e-09!169;UBERON:0000153!7.42e-09!129;UBERON:0007811!7.42e-09!129;UBERON:0000924!9.96e-09!173;UBERON:0006601!9.96e-09!173;UBERON:0000033!1.26e-08!123;UBERON:0002420!8.50e-07!9;UBERON:0007245!8.50e-07!9;UBERON:0010009!8.50e-07!9;UBERON:0010011!8.50e-07!9;UBERON:0000454!8.50e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!1.35e-25!82;UBERON:0005743!4.91e-24!86;UBERON:0001049!6.95e-24!57;UBERON:0005068!6.95e-24!57;UBERON:0006241!6.95e-24!57;UBERON:0007135!6.95e-24!57;UBERON:0000073!1.62e-23!94;UBERON:0001016!1.62e-23!94;UBERON:0002020!8.75e-21!34;UBERON:0003528!8.75e-21!34;UBERON:0001893!1.34e-20!34;UBERON:0002791!6.04e-20!33;UBERON:0002780!1.98e-19!41;UBERON:0001890!1.98e-19!41;UBERON:0006240!1.98e-19!41;UBERON:0000955!2.93e-19!69;UBERON:0006238!2.93e-19!69;UBERON:0001869!5.08e-19!32;UBERON:0003080!1.28e-18!42;UBERON:0002616!3.44e-18!59;UBERON:0003075!6.04e-17!86;UBERON:0007284!6.04e-17!86;UBERON:0007023!6.84e-17!115;UBERON:0001950!3.22e-16!20;UBERON:0002346!5.70e-16!90;UBERON:0002619!8.72e-16!22;UBERON:0000956!1.07e-15!25;UBERON:0000203!1.07e-15!25;UBERON:0003056!7.92e-14!61;UBERON:0004121!4.61e-09!169;UBERON:0000153!7.42e-09!129;UBERON:0007811!7.42e-09!129;UBERON:0000924!9.96e-09!173;UBERON:0006601!9.96e-09!173;UBERON:0000033!1.26e-08!123;UBERON:0002420!8.50e-07!9;UBERON:0007245!8.50e-07!9;UBERON:0010009!8.50e-07!9;UBERON:0010011!8.50e-07!9;UBERON:0000454!8.50e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.97e-32;32!UBERON:0001950;1.28e-31;20!UBERON:0003528;5.01e-30;34!UBERON:0002020;5.01e-30;34!UBERON:0001893;1.05e-28;34!UBERON:0002619;1.42e-28;22!UBERON:0001869;3.20e-28;32!UBERON:0002780;3.31e-26;41!UBERON:0001890;3.31e-26;41!UBERON:0000073;2.40e-25;53!UBERON:0002616;2.40e-25;53!UBERON:0000956;6.95e-25;25!UBERON:0000203;6.95e-25;25!UBERON:0002420;5.09e-19;9!UBERON:0007245;5.09e-19;9!UBERON:0010009;5.09e-19;9!UBERON:0010011;5.09e-19;9!UBERON:0000454;5.09e-19;9!UBERON:0001016;2.10e-18;83!UBERON:0001017;3.84e-18;75!UBERON:0000955;2.77e-16;68!UBERON:0000125;5.85e-14;9!UBERON:0002308;5.85e-14;9!UBERON:0001871;1.08e-13;6!UBERON:0009663;1.54e-12;7!UBERON:0001872;2.52e-12;5!UBERON:0002021;8.00e-12;5!UBERON:0002240;1.12e-11;3!UBERON:0005174;1.12e-11;3!UBERON:0001137;1.12e-11;3!UBERON:0001876;8.00e-09;2!UBERON:0002771;1.61e-08;2!UBERON:0000369;2.41e-08;4!UBERON:0002435;2.41e-08;4!UBERON:0000204;2.41e-08;4!UBERON:0001897;7.16e-08;2!UBERON:0010225;7.16e-08;2!UBERON:0000349;2.65e-07;5!UBERON:0004732;3.49e-07;13!UBERON:0011216;5.14e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.04e-47,56;UBERON:0005068,3.04e-47,56;UBERON:0006241,3.04e-47,56;UBERON:0007135,3.04e-47,56;UBERON:0001017,3.47e-46,81;UBERON:0001016,1.45e-43,89;UBERON:0000073,1.02e-39,53;UBERON:0002616,1.02e-39,53;UBERON:0003528,5.68e-37,34;UBERON:0002020,5.68e-37,34;UBERON:0002780,1.22e-36,41;UBERON:0001890,1.22e-36,41;UBERON:0003080,1.22e-36,41;UBERON:0006240,1.22e-36,41;UBERON:0002791,2.75e-35,32;UBERON:0000955,1.51e-34,68;UBERON:0006238,1.51e-34,68;UBERON:0001893,5.43e-33,34;UBERON:0003075,1.43e-32,82;UBERON:0007284,1.43e-32,82;UBERON:0001950,1.59e-31,20;UBERON:0001869,2.63e-31,32;UBERON:0002346,1.01e-30,86;UBERON:0002619,1.73e-28,22;UBERON:0003056,1.88e-25,61;UBERON:0000956,8.26e-25,25;UBERON:0000203,8.26e-25,25;UBERON:0010371,3.80e-24,104;UBERON:0010314,5.50e-22,132;UBERON:0007023,9.36e-20,114;UBERON:0002420,7.15e-19,9;UBERON:0007245,7.15e-19,9;UBERON:0010009,7.15e-19,9;UBERON:0010011,7.15e-19,9;UBERON:0000454,7.15e-19,9;UBERON:0004121,7.33e-19,171;UBERON:0000924,7.33e-19,171;UBERON:0006601,7.33e-19,171;UBERON:0011216,1.84e-14,223;UBERON:0000125,8.35e-14,9;UBERON:0002308,8.35e-14,9;UBERON:0001871,8.89e-14,6;UBERON:0009663,2.34e-12,7;UBERON:0001872,3.81e-12,5;UBERON:0002021,9.01e-12,5;UBERON:0002240,1.26e-11,3;UBERON:0005174,1.26e-11,3;UBERON:0001137,1.26e-11,3;UBERON:0003076,1.69e-11,15;UBERON:0003057,1.69e-11,15;UBERON:0000025,1.10e-10,192;UBERON:0001876,6.76e-09,2;UBERON:0002771,1.44e-08,2;UBERON:0000369,3.06e-08,4;UBERON:0002435,3.06e-08,4;UBERON:0000204,3.06e-08,4;UBERON:0010082,3.06e-08,4;UBERON:0001897,3.63e-08,2;UBERON:0010225,3.63e-08,2;UBERON:0000349,2.75e-07,5;UBERON:0004732,2.92e-07,13;UBERON:0004111,3.73e-07,240 | |||
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| ||
|short_description=p21@RTN4 | |short_description=p21@RTN4 | ||
}} | }} |
Latest revision as of 16:44, 17 September 2015
Short description: | p21@RTN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RTN4_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 173bp_to_AF063601_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data