FFCP PHASE1:Hg19::chr7:20257167..20257187,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346389 | |EntrezGene=346389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30215 | |HGNC=30215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN28 | |UniProt=Q6ZN28 | ||
|association_with_transcript=-140bp_to_ENST00000332878_5end | |association_with_transcript=-140bp_to_ENST00000332878_5end | ||
|cluster_id=chr7:20257167..20257187,- | |||
|coexpression_cluster_id=C2140 | |||
|description=CAGE_peak_5_at_MACC1_5end | |description=CAGE_peak_5_at_MACC1_5end | ||
|id=chr7:20257167..20257187,- | |id=chr7:20257167..20257187,- | ||
|ontology_enrichment_celltype=CL:0002076!2.10e-09!43 | |ontology_enrichment_celltype=CL:0002076!2.10e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.89e-11;3!CL:0002076;5.38e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.58e-11,3;CL:0002076,3.59e-08,42;CL:0000066,3.93e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!7.81e-13!25;DOID:305!1.78e-11!106;DOID:0050687!8.42e-07!143 | |ontology_enrichment_disease=DOID:299!7.81e-13!25;DOID:305!1.78e-11!106;DOID:0050687!8.42e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:299;1.33e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.21e-09,106;DOID:299,1.09e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.02e-11!169;UBERON:0000925!8.02e-11!169;UBERON:0006595!8.02e-11!169;UBERON:0004921!2.14e-10!129;UBERON:0004185!2.14e-10!129;UBERON:0001007!7.36e-10!155;UBERON:0001555!7.36e-10!155;UBERON:0007026!7.36e-10!155;UBERON:0002294!6.74e-08!7;UBERON:0001173!6.74e-08!7;UBERON:0004912!6.74e-08!7;UBERON:0000077!2.45e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!8.02e-11!169;UBERON:0000925!8.02e-11!169;UBERON:0006595!8.02e-11!169;UBERON:0004921!2.14e-10!129;UBERON:0004185!2.14e-10!129;UBERON:0001007!7.36e-10!155;UBERON:0001555!7.36e-10!155;UBERON:0007026!7.36e-10!155;UBERON:0002294!6.74e-08!7;UBERON:0001173!6.74e-08!7;UBERON:0004912!6.74e-08!7;UBERON:0000077!2.45e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.96e-19;17!UBERON:0005409;1.62e-14;22!UBERON:0002108;5.06e-13;4!UBERON:0004921;7.78e-10;33!UBERON:0002394;1.97e-09;4!UBERON:0003928;1.97e-09;4!UBERON:0002294;3.96e-09;7!UBERON:0001173;3.96e-09;7!UBERON:0000059;3.22e-08;11!UBERON:0001155;7.92e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.52e-19,17;UBERON:0004921,2.11e-14,118;UBERON:0002108,5.42e-13,4;UBERON:0005409,9.84e-13,25;UBERON:0004119,5.06e-12,160;UBERON:0000925,5.06e-12,160;UBERON:0006595,5.06e-12,160;UBERON:0001007,1.09e-11,145;UBERON:0001555,1.09e-11,145;UBERON:0007026,1.09e-11,145;UBERON:0001046,6.80e-11,19;UBERON:0005911,6.79e-09,82;UBERON:0000162,1.28e-08,14;UBERON:0001353,1.28e-08,14;UBERON:0000163,1.28e-08,14;UBERON:0006866,1.28e-08,14;UBERON:0000164,1.28e-08,14;UBERON:0000931,1.28e-08,14;UBERON:0000059,2.11e-08,11;UBERON:0004122,5.29e-08,15;UBERON:0002294,4.79e-07,9;UBERON:0001173,4.79e-07,9;UBERON:0004912,4.79e-07,9;UBERON:0001155,5.87e-07,9 | |||
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| ||
|short_description=p5@MACC1 | |short_description=p5@MACC1 | ||
}} | }} |
Latest revision as of 15:51, 17 September 2015
Short description: | p5@MACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MACC1_5end |
Coexpression cluster: | C2140_argyrophil_smallcell_small_duodenum_trachea_colon_temporal |
Association with transcript: | -140bp_to_ENST00000332878_5end |
EntrezGene: | MACC1 |
HGNC: | 30215 |
UniProt: | Q6ZN28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.58e-11 | 3 |
endo-epithelial cell | 3.59e-08 | 42 |
epithelial cell | 3.93e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.52e-19 | 17 |
subdivision of digestive tract | 2.11e-14 | 118 |
small intestine | 5.42e-13 | 4 |
gastrointestinal system | 9.84e-13 | 25 |
endoderm-derived structure | 5.06e-12 | 160 |
endoderm | 5.06e-12 | 160 |
presumptive endoderm | 5.06e-12 | 160 |
digestive system | 1.09e-11 | 145 |
digestive tract | 1.09e-11 | 145 |
primitive gut | 1.09e-11 | 145 |
hindgut | 6.80e-11 | 19 |
endo-epithelium | 6.79e-09 | 82 |
cloaca | 1.28e-08 | 14 |
anal region | 1.28e-08 | 14 |
embryonic cloaca | 1.28e-08 | 14 |
terminal part of digestive tract | 1.28e-08 | 14 |
primitive urogenital sinus | 1.28e-08 | 14 |
proctodeum | 1.28e-08 | 14 |
large intestine | 2.11e-08 | 11 |
genitourinary system | 5.29e-08 | 15 |
biliary system | 4.79e-07 | 9 |
biliary tree | 4.79e-07 | 9 |
biliary bud | 4.79e-07 | 9 |
colon | 5.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.21e-09 | 106 |
adenocarcinoma | 1.09e-08 | 25 |