FFCP PHASE1:Hg19::chr8:24774877..24774889,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7734 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UK51 | |||
|association_with_transcript=197bp_to_AF181990_5end | |||
|cluster_id=chr8:24774877..24774889,+ | |||
|coexpression_cluster_id=C261 | |||
|description=CAGE_peak_14_at_NEFM_5end | |||
|id=chr8:24774877..24774889,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.49e-16;82!UBERON:0006241;1.61e-08;3!UBERON:0003057;1.61e-08;3!UBERON:0006222;4.56e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-92!57;UBERON:0005068!2.23e-92!57;UBERON:0006241!2.23e-92!57;UBERON:0007135!2.23e-92!57;UBERON:0002616!4.65e-77!59;UBERON:0001017!1.26e-76!82;UBERON:0002780!2.49e-76!41;UBERON:0001890!2.49e-76!41;UBERON:0006240!2.49e-76!41;UBERON:0005743!3.84e-75!86;UBERON:0003080!2.77e-74!42;UBERON:0000955!2.27e-69!69;UBERON:0006238!2.27e-69!69;UBERON:0000073!2.65e-69!94;UBERON:0001016!2.65e-69!94;UBERON:0003075!9.34e-65!86;UBERON:0007284!9.34e-65!86;UBERON:0002020!1.55e-61!34;UBERON:0003528!1.55e-61!34;UBERON:0002346!2.96e-61!90;UBERON:0001893!7.93e-61!34;UBERON:0002791!1.59e-58!33;UBERON:0001869!1.15e-56!32;UBERON:0003056!1.51e-50!61;UBERON:0002619!1.08e-47!22;UBERON:0000033!9.09e-46!123;UBERON:0007023!3.66e-45!115;UBERON:0004121!1.44e-44!169;UBERON:0000924!3.59e-43!173;UBERON:0006601!3.59e-43!173;UBERON:0000153!5.66e-43!129;UBERON:0007811!5.66e-43!129;UBERON:0001950!6.29e-43!20;UBERON:0000956!2.08e-41!25;UBERON:0000203!2.08e-41!25;UBERON:0000025!4.83e-23!194;UBERON:0002308!1.38e-21!9;UBERON:0000125!1.38e-21!9;UBERON:0002420!2.46e-21!9;UBERON:0007245!2.46e-21!9;UBERON:0010009!2.46e-21!9;UBERON:0010011!2.46e-21!9;UBERON:0000454!2.46e-21!9;UBERON:0003076!1.50e-18!15;UBERON:0003057!1.50e-18!15;UBERON:0004111!2.02e-18!241;UBERON:0009663!1.12e-16!7;UBERON:0001894!1.39e-16!7;UBERON:0006222!1.39e-16!7;UBERON:0000200!7.21e-16!6;UBERON:0002298!1.09e-15!8;UBERON:0001871!2.81e-15!7;UBERON:0000477!7.89e-15!286;UBERON:0000483!4.28e-14!309;UBERON:0000119!8.18e-14!312;UBERON:0000475!1.84e-13!365;UBERON:0000349!4.91e-13!5;UBERON:0001872!8.02e-13!5;UBERON:0004733!1.72e-12!12;UBERON:0002028!1.72e-12!12;UBERON:0007277!1.72e-12!12;UBERON:0002021!6.73e-12!5;UBERON:0004732!2.09e-11!13;UBERON:0000064!2.15e-11!219;UBERON:0000369!3.37e-10!4;UBERON:0002435!3.37e-10!4;UBERON:0000204!3.37e-10!4;UBERON:0010082!3.37e-10!4;UBERON:0003296!5.96e-10!4;UBERON:0010133!5.96e-10!4;UBERON:0000988!4.43e-09!3;UBERON:0002771!5.44e-09!3;UBERON:0006331!9.06e-09!3;UBERON:0001896!1.36e-08!3;UBERON:0005290!1.36e-08!3;UBERON:0010096!1.36e-08!3;UBERON:0002240!1.92e-08!3;UBERON:0005383!3.22e-08!3;UBERON:0005382!3.22e-08!3;UBERON:0000481!1.16e-07!347;UBERON:0000922!5.66e-07!612;UBERON:0002680!7.95e-07!9;UBERON:0001895!7.95e-07!9;UBERON:0010092!7.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.01e-57;34!UBERON:0002020;1.01e-57;34!UBERON:0002619;2.00e-57;22!UBERON:0002791;6.49e-56;32!UBERON:0001869;1.19e-54;32!UBERON:0001893;4.63e-54;34!UBERON:0000956;2.11e-50;25!UBERON:0000203;2.11e-50;25!UBERON:0002780;3.29e-48;41!UBERON:0001890;3.29e-48;41!UBERON:0001950;4.65e-48;20!UBERON:0000073;7.44e-45;53!UBERON:0002616;7.44e-45;53!UBERON:0002298;5.19e-33;6!UBERON:0000200;7.23e-33;6!UBERON:0001017;6.00e-30;75!UBERON:0000955;6.91e-29;68!UBERON:0001016;1.07e-21;83!UBERON:0000125;2.48e-21;9!UBERON:0002308;2.48e-21;9!UBERON:0002420;8.19e-21;9!UBERON:0007245;8.19e-21;9!UBERON:0010009;8.19e-21;9!UBERON:0010011;8.19e-21;9!UBERON:0000454;8.19e-21;9!UBERON:0001871;2.17e-19;6!UBERON:0000988;5.21e-18;3!UBERON:0000349;8.68e-18;5!UBERON:0001872;1.13e-17;5!UBERON:0001896;8.35e-17;3!UBERON:0005290;8.35e-17;3!UBERON:0004733;3.03e-16;12!UBERON:0002028;3.03e-16;12!UBERON:0004732;5.96e-15;13!UBERON:0002702;1.08e-12;2!UBERON:0007023;1.09e-12;114!UBERON:0002148;1.18e-12;2!UBERON:0006331;1.18e-12;2!UBERON:0009662;1.18e-12;2!UBERON:0009663;2.65e-12;7!UBERON:0002771;2.68e-12;2!UBERON:0001954;4.18e-12;2!UBERON:0003022;4.18e-12;2!UBERON:0002421;4.18e-12;2!UBERON:0002600;4.18e-12;2!UBERON:0001876;7.68e-12;2!UBERON:0001905;7.68e-12;2!UBERON:0002757;7.68e-12;2!UBERON:0010134;7.68e-12;2!UBERON:0005408;7.68e-12;2!UBERON:0001899;7.68e-12;2!UBERON:0002021;3.19e-10;5!UBERON:0011216;1.47e-09;132!UBERON:0001870;9.70e-09;3!UBERON:0002240;1.61e-08;3!UBERON:0005174;1.61e-08;3!UBERON:0001137;1.61e-08;3!UBERON:0005383;4.39e-08;3!UBERON:0005382;4.39e-08;3!UBERON:0001894;1.21e-07;7!UBERON:0010314;2.41e-07;132!UBERON:0003112;3.72e-07;1!UBERON:0011158;3.72e-07;1!UBERON:0003128;3.72e-07;1!UBERON:0001703;3.72e-07;1!UBERON:0002241;3.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.99e-92,56;UBERON:0005068,3.99e-92,56;UBERON:0006241,3.99e-92,56;UBERON:0007135,3.99e-92,56;UBERON:0000073,5.62e-85,53;UBERON:0002616,5.62e-85,53;UBERON:0003528,1.71e-70,34;UBERON:0002020,1.71e-70,34;UBERON:0001017,9.03e-70,81;UBERON:0002780,3.44e-69,41;UBERON:0001890,3.44e-69,41;UBERON:0003080,3.44e-69,41;UBERON:0006240,3.44e-69,41;UBERON:0000955,8.63e-69,68;UBERON:0006238,8.63e-69,68;UBERON:0001893,1.58e-63,34;UBERON:0001016,2.43e-62,89;UBERON:0003075,2.25e-61,82;UBERON:0007284,2.25e-61,82;UBERON:0001869,2.39e-61,32;UBERON:0002791,3.33e-61,32;UBERON:0002346,2.85e-58,86;UBERON:0002619,2.94e-57,22;UBERON:0010371,1.86e-50,104;UBERON:0000956,2.97e-50,25;UBERON:0000203,2.97e-50,25;UBERON:0001950,6.71e-48,20;UBERON:0003056,3.20e-45,61;UBERON:0007023,5.42e-40,114;UBERON:0010314,1.10e-38,132;UBERON:0002298,3.73e-33,6;UBERON:0000200,6.49e-33,6;UBERON:0004121,4.59e-32,171;UBERON:0000924,4.59e-32,171;UBERON:0006601,4.59e-32,171;UBERON:0011216,7.45e-25,223;UBERON:0000025,7.42e-23,192;UBERON:0003076,8.64e-23,15;UBERON:0003057,8.64e-23,15;UBERON:0000125,2.92e-21,9;UBERON:0002308,2.92e-21,9;UBERON:0002420,6.87e-21,9;UBERON:0007245,6.87e-21,9;UBERON:0010009,6.87e-21,9;UBERON:0010011,6.87e-21,9;UBERON:0000454,6.87e-21,9;UBERON:0001871,1.72e-19,6;UBERON:0000988,5.22e-18,3;UBERON:0000349,6.13e-18,5;UBERON:0001872,2.16e-17,5;UBERON:0004111,4.82e-17,240;UBERON:0001896,6.03e-17,3;UBERON:0005290,6.03e-17,3;UBERON:0010096,6.03e-17,3;UBERON:0004733,2.58e-16,12;UBERON:0002028,2.58e-16,12;UBERON:0007277,2.58e-16,12;UBERON:0004732,5.14e-15,13;UBERON:0000483,4.62e-13,306;UBERON:0000119,7.15e-13,309;UBERON:0002702,1.02e-12,2;UBERON:0002148,1.29e-12,2;UBERON:0006331,1.29e-12,2;UBERON:0009662,1.29e-12,2;UBERON:0002771,2.40e-12,2;UBERON:0009663,2.90e-12,7;UBERON:0001954,4.19e-12,2;UBERON:0003022,4.19e-12,2;UBERON:0002421,4.19e-12,2;UBERON:0002600,4.19e-12,2;UBERON:0001876,4.95e-12,2;UBERON:0001905,6.89e-12,2;UBERON:0002757,6.89e-12,2;UBERON:0010134,6.89e-12,2;UBERON:0005408,6.89e-12,2;UBERON:0001899,6.89e-12,2;UBERON:0002021,3.40e-10,5;UBERON:0001870,9.35e-09,3;UBERON:0002240,1.58e-08,3;UBERON:0005174,1.58e-08,3;UBERON:0001137,1.58e-08,3;UBERON:0005383,4.72e-08,3;UBERON:0005382,4.72e-08,3;UBERON:0001894,1.15e-07,7;UBERON:0006222,1.15e-07,7;UBERON:0003112,3.73e-07,1;UBERON:0011158,3.73e-07,1;UBERON:0003128,3.73e-07,1;UBERON:0001703,3.73e-07,1;UBERON:0002241,3.73e-07,1;UBERON:0004761,3.73e-07,1;UBERON:0009617,3.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0.232387885739037,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,1.96937182974718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66982576691332,0,0,0,0,0,0,0,0,0.583209226766509,0,2.65722415744152,0.723578631752448,0,0.331737779793674,0.295547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,4.68528891450678,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.821432273351958,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,2.72406812223151,0,0.275078873194468,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3161445052397,4.09921065402339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,2.92863035764712,5.75878281249899,2.29363678276028,2.5513681853476,1.98708489412427,0.968440444553616,0,0,0,0,1.40500471742064,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.642292250964595,1.41696576325585,3.35231104020018,1.43581454968528,0.252071696221718,0.207471757392654,5.32869630585109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95858995393344,0.781078098613847,8.06078506354618,1.01465296310251,2.18789923607288,0,0,0,0,1.60710550763486,3.69912094440706,0.606965604236632,0.227662191351298,0,0,0,4.68991157540139,1.11813715056843,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769583617218004,0,0,0,0,0,0,3.92616934229891,0.594092800654172,4.226557275834,0.339854229375634,0,0,0,0,0,0,0,0,1.14671666521161,0,0.339957450954573,2.18175345170189,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0.267964130156178,0.829169439458779,0.827463966895162,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@NEFM | |||
}} |
Latest revision as of 15:48, 17 September 2015
Short description: | p14@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NEFM_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | 197bp_to_AF181990_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | Q9UK51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data