FFCP PHASE1:Hg19::chr15:42386758..42386763,-: Difference between revisions
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|id=chr15:42386758..42386763,-
|short_description=p1@PLA2G4D
|description=CAGE_peak_1_at_PLA2G4D_5end
|association_with_transcript=-6bp_to_ENST00000290472,NM_178034...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283748 | |EntrezGene=283748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30038 | |HGNC=30038 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XP0 | |UniProt=Q86XP0 | ||
|association_with_transcript=-6bp_to_ENST00000290472,NM_178034,uc001zox.2_5end | |||
|cluster_id=chr15:42386758..42386763,- | |||
|coexpression_cluster_id=C630 | |||
|description=CAGE_peak_1_at_PLA2G4D_5end | |||
|id=chr15:42386758..42386763,- | |||
|ontology_enrichment_celltype=CL:0000240!2.46e-10!6;CL:0000311!2.46e-10!6;CL:0000079!2.46e-10!6;CL:0000237!2.46e-10!6;CL:0000036!2.46e-10!6;CL:0000357!2.46e-10!6;CL:0000114!2.46e-10!6;CL:0002159!2.70e-10!13;CL:0001014!1.23e-08!2;CL:0001016!1.23e-08!2;CL:0000362!4.87e-08!8;CL:0000622!7.54e-08!5;CL:0000312!1.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000622;4.35e-23;5!CL:0000154;2.34e-19;6!CL:0002623;8.05e-18;3!CL:0002159;2.27e-14;14!CL:0000150;4.06e-13;9!CL:0000362;5.64e-13;9!CL:0000312;6.63e-11;5!CL:0000240;3.08e-09;6!CL:0000311;3.08e-09;6!CL:0000079;3.08e-09;6!CL:0000237;3.08e-09;6!CL:0000317;1.93e-07;2!CL:1000448;1.93e-07;2!CL:0002308;1.93e-07;2!CL:0000575;1.93e-07;2!CL:0002140;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,4.70e-23,5;CL:0000154,2.49e-19,6;CL:0002623,7.72e-18,3;CL:0002159,2.95e-14,14;CL:0000150,4.23e-13,9;CL:0000362,6.65e-13,9;CL:0000312,7.51e-11,5;CL:0000240,3.42e-09,6;CL:0000311,3.42e-09,6;CL:0000079,3.42e-09,6;CL:0000237,3.42e-09,6;CL:0000036,3.42e-09,6;CL:0000357,3.42e-09,6;CL:0000114,3.42e-09,6;CL:0000317,2.12e-07,2;CL:1000448,2.12e-07,2;CL:0002308,2.12e-07,2;CL:0002140,2.12e-07,2;CL:0000575,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;3.08e-09;6!CL:0000114;3.08e-09;6!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.33e-13;1!DOID:3149;1.33e-13;1!DOID:3451;1.93e-07;2!DOID:4159;1.93e-07;2!DOID:0060122;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.25e-13,1;DOID:3149,1.25e-13,1;DOID:3451,1.87e-07,2;DOID:4159,1.87e-07,2;DOID:0060122,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.55e-09!10;UBERON:0009145!1.55e-09!10;UBERON:0003408!1.82e-09!10;UBERON:0006562!1.23e-08!11;UBERON:0000166!3.15e-08!21;UBERON:0003102!1.31e-07!95;UBERON:0000165!1.56e-07!28;UBERON:0000930!1.56e-07!28;UBERON:0000078!2.30e-07!18;UBERON:0000161!3.01e-07!35;UBERON:0001003!8.18e-07!14;UBERON:0007376!8.18e-07!14;UBERON:0007383!8.18e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;8.75e-18;3!UBERON:0001033;8.75e-18;3!UBERON:0005795;3.50e-14;1!UBERON:0007029;1.33e-13;1!UBERON:0006834;1.33e-13;1!UBERON:0001003;1.97e-13;15!UBERON:0007376;1.97e-13;15!UBERON:0000014;3.21e-13;4!UBERON:0000002;1.83e-09;6!UBERON:0001560;1.83e-09;6!UBERON:0001044;2.21e-09;6!UBERON:0003293;2.21e-09;6!UBERON:0003294;2.21e-09;6!UBERON:0010047;2.21e-09;6!UBERON:0003408;2.21e-09;6!UBERON:0000167;2.21e-09;6!UBERON:0000165;1.85e-07;28!UBERON:0002419;1.93e-07;2!UBERON:0007771;1.93e-07;2!UBERON:0003297;1.93e-07;2!UBERON:0001821;1.93e-07;2!UBERON:0003487;1.93e-07;2!UBERON:0001820;1.93e-07;2!UBERON:0002199;2.11e-07;46!UBERON:0002416;2.11e-07;46!UBERON:0000995;3.07e-07;17!UBERON:0003102;6.00e-07;50!UBERON:0003975;7.30e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.14e-18,3;UBERON:0001033,9.14e-18,3;UBERON:0010056,9.14e-18,3;UBERON:0007029,8.58e-14,1;UBERON:0006834,1.10e-13,1;UBERON:0001003,2.00e-13,15;UBERON:0007376,2.00e-13,15;UBERON:0007383,2.00e-13,15;UBERON:0000014,2.51e-13,4;UBERON:0003102,2.52e-11,99;UBERON:0005795,1.80e-09,22;UBERON:0000002,1.83e-09,6;UBERON:0001560,1.83e-09,6;UBERON:0000166,1.92e-09,22;UBERON:0001044,2.16e-09,6;UBERON:0003293,2.16e-09,6;UBERON:0003294,2.16e-09,6;UBERON:0010047,2.16e-09,6;UBERON:0000167,2.16e-09,6;UBERON:0002097,1.83e-07,41;UBERON:0002419,2.12e-07,2;UBERON:0007771,2.12e-07,2;UBERON:0003297,2.12e-07,2;UBERON:0001821,2.12e-07,2;UBERON:0003487,2.12e-07,2;UBERON:0001820,2.12e-07,2;UBERON:0005089,2.12e-07,2;UBERON:0005088,2.12e-07,2;UBERON:0000165,3.29e-07,29;UBERON:0000930,3.29e-07,29 | |||
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| ||
|short_description=p1@PLA2G4D | |||
}} | }} |
Latest revision as of 15:27, 17 September 2015
Short description: | p1@PLA2G4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLA2G4D_5end |
Coexpression cluster: | C630_cervix_uterus_salivary_extraskeletal_tongue_esophagus_penis |
Association with transcript: | -6bp_to_ENST00000290472, NM_178034, uc001zox.2_5end |
EntrezGene: | PLA2G4D |
HGNC: | 30038 |
UniProt: | Q86XP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 4.70e-23 | 5 |
protein secreting cell | 2.49e-19 | 6 |
acinar cell of salivary gland | 7.72e-18 | 3 |
general ecto-epithelial cell | 2.95e-14 | 14 |
glandular epithelial cell | 4.23e-13 | 9 |
epidermal cell | 6.65e-13 | 9 |
keratinocyte | 7.51e-11 | 5 |
stratified squamous epithelial cell | 3.42e-09 | 6 |
keratin accumulating cell | 3.42e-09 | 6 |
stratified epithelial cell | 3.42e-09 | 6 |
keratinizing barrier epithelial cell | 3.42e-09 | 6 |
epithelial fate stem cell | 3.42e-09 | 6 |
stratified epithelial stem cell | 3.42e-09 | 6 |
surface ectodermal cell | 3.42e-09 | 6 |
sebum secreting cell | 2.12e-07 | 2 |
epithelial cell of sweat gland | 2.12e-07 | 2 |
epithelial cell of skin gland | 2.12e-07 | 2 |
acinar cell of sebaceous gland | 2.12e-07 | 2 |
corneal epithelial cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.14e-18 | 3 |
gustatory system | 9.14e-18 | 3 |
future tongue | 9.14e-18 | 3 |
surface | 8.58e-14 | 1 |
uterus or analog | 1.10e-13 | 1 |
skin epidermis | 2.00e-13 | 15 |
outer epithelium | 2.00e-13 | 15 |
enveloping layer of ectoderm | 2.00e-13 | 15 |
zone of skin | 2.51e-13 | 4 |
surface structure | 2.52e-11 | 99 |
embryonic uterus | 1.80e-09 | 22 |
uterine cervix | 1.83e-09 | 6 |
neck of organ | 1.83e-09 | 6 |
oral opening | 1.92e-09 | 22 |
saliva-secreting gland | 2.16e-09 | 6 |
gland of oral region | 2.16e-09 | 6 |
gland of foregut | 2.16e-09 | 6 |
oral gland | 2.16e-09 | 6 |
oral cavity | 2.16e-09 | 6 |
skin of body | 1.83e-07 | 41 |
skin gland | 2.12e-07 | 2 |
epidermis gland | 2.12e-07 | 2 |
gland of integumental system | 2.12e-07 | 2 |
sebaceous gland | 2.12e-07 | 2 |
skin sebaceous gland | 2.12e-07 | 2 |
sweat gland | 2.12e-07 | 2 |
sweat gland placode | 2.12e-07 | 2 |
sebaceous gland placode | 2.12e-07 | 2 |
mouth | 3.29e-07 | 29 |
stomodeum | 3.29e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.25e-13 | 1 |
keratoacanthoma | 1.25e-13 | 1 |
skin carcinoma | 1.87e-07 | 2 |
skin cancer | 1.87e-07 | 2 |
integumentary system cancer | 1.87e-07 | 2 |