FFCP PHASE1:Hg19::chr12:15475283..15475290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5800 | |EntrezGene=5800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9678 | |HGNC=9678 | ||
|TSSclassifier=strong | |||
|UniProt=Q16827 | |UniProt=Q16827 | ||
|association_with_transcript=-40bp_to_ENST00000281171_5end | |association_with_transcript=-40bp_to_ENST00000281171_5end | ||
|cluster_id=chr12:15475283..15475290,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_13_at_PTPRO_5end | |description=CAGE_peak_13_at_PTPRO_5end | ||
|id=chr12:15475283..15475290,+ | |id=chr12:15475283..15475290,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.42e-65!34;UBERON:0003528!3.42e-65!34;UBERON:0001893!5.46e-65!34;UBERON:0001869!9.98e-64!32;UBERON:0002791!2.40e-61!33;UBERON:0001049!6.88e-55!57;UBERON:0005068!6.88e-55!57;UBERON:0006241!6.88e-55!57;UBERON:0007135!6.88e-55!57;UBERON:0002780!3.63e-53!41;UBERON:0001890!3.63e-53!41;UBERON:0006240!3.63e-53!41;UBERON:0002616!7.94e-53!59;UBERON:0003080!8.60e-52!42;UBERON:0000955!1.23e-50!69;UBERON:0006238!1.23e-50!69;UBERON:0002619!3.64e-50!22;UBERON:0001950!3.99e-49!20;UBERON:0001017!5.98e-48!82;UBERON:0000073!6.38e-46!94;UBERON:0001016!6.38e-46!94;UBERON:0005743!2.02e-45!86;UBERON:0000956!6.73e-44!25;UBERON:0000203!6.73e-44!25;UBERON:0003075!1.04e-39!86;UBERON:0007284!1.04e-39!86;UBERON:0002346!1.21e-37!90;UBERON:0003056!3.56e-37!61;UBERON:0007023!1.67e-32!115;UBERON:0000033!1.21e-29!123;UBERON:0000153!6.17e-28!129;UBERON:0007811!6.17e-28!129;UBERON:0004121!1.25e-25!169;UBERON:0000924!7.38e-25!173;UBERON:0006601!7.38e-25!173;UBERON:0002308!1.02e-22!9;UBERON:0000125!1.02e-22!9;UBERON:0002021!4.40e-22!5;UBERON:0000369!3.40e-18!4;UBERON:0002435!3.40e-18!4;UBERON:0000204!3.40e-18!4;UBERON:0010082!3.40e-18!4;UBERON:0000200!1.36e-17!6;UBERON:0002420!9.87e-17!9;UBERON:0007245!9.87e-17!9;UBERON:0010009!9.87e-17!9;UBERON:0010011!9.87e-17!9;UBERON:0000454!9.87e-17!9;UBERON:0009663!1.73e-15!7;UBERON:0001872!2.37e-14!5;UBERON:0005383!4.47e-14!3;UBERON:0005382!4.47e-14!3;UBERON:0002771!2.60e-13!3;UBERON:0001871!5.08e-13!7;UBERON:0000064!2.50e-12!219;UBERON:0000025!1.62e-11!194;UBERON:0001873!5.56e-10!2;UBERON:0010122!5.56e-10!2;UBERON:0002148!1.95e-09!2;UBERON:0009662!1.95e-09!2;UBERON:0004111!7.17e-09!241;UBERON:0000477!1.27e-08!286;UBERON:0002298!2.09e-08!8;UBERON:0004733!2.70e-08!12;UBERON:0002028!2.70e-08!12;UBERON:0007277!2.70e-08!12;UBERON:0000349!5.00e-08!5;UBERON:0004732!1.23e-07!13;UBERON:0000475!4.59e-07!365;UBERON:0000062!5.59e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.33e-32;5!UBERON:0002114;1.71e-14;2!UBERON:0000922;2.22e-09;49!UBERON:0002108;3.10e-09;4!UBERON:0001950;1.34e-08;20!UBERON:0002619;6.19e-08;22!UBERON:0000956;3.96e-07;25!UBERON:0000203;3.96e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.44e-32,5;UBERON:0002114,1.60e-14,2;UBERON:0002108,2.97e-09,4;UBERON:0001950,1.37e-08,20;UBERON:0002619,6.29e-08,22;UBERON:0000956,4.02e-07,25;UBERON:0000203,4.02e-07,25 | |||
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| ||
|short_description=p13@PTPRO | |short_description=p13@PTPRO | ||
}} | }} |
Latest revision as of 14:51, 17 September 2015
Short description: | p13@PTPRO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PTPRO_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -40bp_to_ENST00000281171_5end |
EntrezGene: | PTPRO |
HGNC: | 9678 |
UniProt: | Q16827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.44e-32 | 5 |
duodenum | 1.60e-14 | 2 |
small intestine | 2.97e-09 | 4 |
neocortex | 1.37e-08 | 20 |
regional part of cerebral cortex | 6.29e-08 | 22 |
cerebral cortex | 4.02e-07 | 25 |
pallium | 4.02e-07 | 25 |