FFCP PHASE1:Hg19::chr4:36246039..36246051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |UniProt=A7E2A5,Q8WZ64 | ||
|association_with_transcript=-60bp_to_NM_015230,uc003gsq.1_5end | |association_with_transcript=-60bp_to_NM_015230,uc003gsq.1_5end | ||
|cluster_id=chr4:36246039..36246051,- | |||
|coexpression_cluster_id=C1522 | |||
|description=CAGE_peak_11_at_ARAP2_5end | |description=CAGE_peak_11_at_ARAP2_5end | ||
|id=chr4:36246039..36246051,- | |id=chr4:36246039..36246051,- | ||
|ontology_enrichment_celltype=CL:0000738!1.32e-32!140;CL:0002087!3.81e-27!119;CL:0000542!3.08e-25!53;CL:0000051!3.08e-25!53;CL:0000838!1.04e-24!52;CL:0002031!1.67e-24!124;CL:0000037!5.17e-23!172;CL:0000566!5.17e-23!172;CL:0000988!1.32e-21!182;CL:0002032!1.82e-20!165;CL:0000837!1.82e-20!165;CL:0000791!7.05e-16!18;CL:0000789!7.05e-16!18;CL:0002420!7.05e-16!18;CL:0002419!7.05e-16!18;CL:0000790!7.05e-16!18;CL:0000084!5.35e-13!25;CL:0000827!5.35e-13!25;CL:0000945!1.26e-10!24;CL:0000826!1.26e-10!24;CL:0000625!1.96e-10!11;CL:0000236!9.61e-08!14;CL:0000860!1.59e-07!45;CL:0000766!1.60e-07!76;CL:0002057!3.79e-07!42 | |ontology_enrichment_celltype=CL:0000738!1.32e-32!140;CL:0002087!3.81e-27!119;CL:0000542!3.08e-25!53;CL:0000051!3.08e-25!53;CL:0000838!1.04e-24!52;CL:0002031!1.67e-24!124;CL:0000037!5.17e-23!172;CL:0000566!5.17e-23!172;CL:0000988!1.32e-21!182;CL:0002032!1.82e-20!165;CL:0000837!1.82e-20!165;CL:0000791!7.05e-16!18;CL:0000789!7.05e-16!18;CL:0002420!7.05e-16!18;CL:0002419!7.05e-16!18;CL:0000790!7.05e-16!18;CL:0000084!5.35e-13!25;CL:0000827!5.35e-13!25;CL:0000945!1.26e-10!24;CL:0000826!1.26e-10!24;CL:0000625!1.96e-10!11;CL:0000236!9.61e-08!14;CL:0000860!1.59e-07!45;CL:0000766!1.60e-07!76;CL:0002057!3.79e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.26e-37;18!CL:0000789;3.26e-37;18!CL:0002419;3.26e-37;18!CL:0000084;9.58e-29;25!CL:0000625;3.65e-26;11!CL:0000542;3.20e-23;53!CL:0000236;2.25e-15;13!CL:0000624;4.92e-11;6!CL:0000945;5.78e-09;24!CL:0002087;8.79e-09;104!CL:0000623;2.54e-08;3!CL:0000226;8.58e-08;3!CL:0000842;8.58e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.30e-39,52;CL:0000542,1.11e-38,53;CL:0000051,1.11e-38,53;CL:0000791,2.40e-37,18;CL:0000789,2.40e-37,18;CL:0002420,2.40e-37,18;CL:0002419,2.40e-37,18;CL:0000790,2.40e-37,18;CL:0000084,8.01e-29,25;CL:0000827,8.01e-29,25;CL:0000625,3.74e-26,11;CL:0000738,3.97e-26,136;CL:0002087,1.35e-23,115;CL:0002031,2.22e-19,120;CL:0000037,9.87e-19,168;CL:0000988,3.68e-18,177;CL:0002032,1.08e-15,161;CL:0000837,1.08e-15,161;CL:0000236,2.38e-14,14;CL:0000624,4.20e-11,6;CL:0000945,5.17e-09,24;CL:0000826,5.17e-09,24;CL:0000623,1.92e-08,3;CL:0000825,1.92e-08,3;CL:0000226,5.41e-08,3;CL:0000842,5.41e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.26e-37;18!CL:0000051;3.20e-23;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-10!102;UBERON:0003061!1.22e-10!102;UBERON:0007023!1.07e-09!115;UBERON:0002193!3.31e-09!112;UBERON:0000178!9.56e-07!15;UBERON:0000179!9.56e-07!15;UBERON:0000463!9.56e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.74e-08;15!UBERON:0000179;1.74e-08;15!UBERON:0000463;1.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.06e-11,4;UBERON:0005058,8.06e-11,4;UBERON:0009113,8.06e-11,4;UBERON:0003295,8.06e-11,4;UBERON:0005562,8.06e-11,4;UBERON:0004177,8.27e-09,7;UBERON:0005057,8.27e-09,7;UBERON:0000178,1.77e-08,15;UBERON:0000179,1.77e-08,15;UBERON:0000463,1.77e-08,15;UBERON:0003351,3.63e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.328402357799783,0.0787107813136792,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0.154934401160603,0.853015394924529,0,1.10799081706375,1.40381113229099,1.08505435357926,0.223915474239924,0.647787332037959,0,0.436194716338694,0.755751887377619,0.485168122375632,0.232429036905685,0.411167888021826,0,1.43846196161075,1.2808035326455,0.709446689665756,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,0,0.290209238628584,0,0,0.502497330513487,0,0.868755378820466,0,0.736555271975129,0,0.422510572623884,0.637812899895131,0.209658645508376,0.112328631146495,0,0.32145117339416,0.855038231223746,0.99458338599545,0.365328307529268,1.75996244461323,1.09227722252426,1.77901850772711,2.56038133539904,1.60158394814405,1.14950487990897,1.32208974556972,0,1.1384259382189,1.76171156811282,3.82273228125229,0,2.24203425192614,0,5.70458333330116,4.32311839024081,3.70082698199117,1.00311897234407,2.60737813306872,3.31413464014313,0,0.891283655081389,0.883817722424512,1.77227115666897,1.08321545506006,1.40900451698243,1.69077151827842,1.31550323682941,2.76350017785848,1.15921234294021,1.77943875794473,2.1403266247177,3.1360657141493,1.24640276967323,3.83220493601921,4.12352934579156,3.79529538029254,2.54852331459277,3.25541726928209,3.8018081777935,1.6563263098555,2.30375900077953,3.74792179657038,2.13099526839615,2.46338399076314,5.44338206706778,3.7441627409691,3.76543450095277,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.649094787309367,0.522389211897802,0,2.8618874916641,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,7.75560528296651,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0.985326475791887,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,1.45710687191585,2.95546140302891,3.66566877261179,2.95188983443421,0,0,0,0,0,0.749007023947182,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.94142780736755,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,1.40373983744043,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.753150406214233,0,0,0,1.83778720165568,1.01489521846434,0,1.70894156152249,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,1.22520107990516,0.743212700502875,0.28853842595289,3.62823401076912,0.637705090915289,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0.626719583092093,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0.37428108081644,0.293016358543788,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0,1.38141957765574,0,0.102268682502155,0.861593638227486,0,0.359473404589307,0.179021174675609,0,0.493217028184668,2.3948309234694,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0.87754158861589,0,0.139423744278603,0.230850775511391,0,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0.816164040795739,0.141353071433941,0,0,0.973033209536731,0,1.48260564340311,0.494255755786011,0.208843899010911,0.134802265961354,0,0,0.364909578431332,0.19566461893209,0,0,1.20990716048664,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0.678923115418936,0,0,0.274083849293502,0,0.50648636764703,0.195551382734803,0.240476460754601,0.426905989478705,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0.858452096273142,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,1.01607998478941,0,0.681017030557878,0.160753148465019,0,0,0.449947783103001,1.5476039091159,0.242998226632099,0,0.315222829196793,0.05245458813499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| ||
|short_description=p11@ARAP2 | |short_description=p11@ARAP2 | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p11@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | -60bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.30e-39 | 52 |
lymphocyte | 1.11e-38 | 53 |
common lymphoid progenitor | 1.11e-38 | 53 |
mature alpha-beta T cell | 2.40e-37 | 18 |
alpha-beta T cell | 2.40e-37 | 18 |
immature T cell | 2.40e-37 | 18 |
mature T cell | 2.40e-37 | 18 |
immature alpha-beta T cell | 2.40e-37 | 18 |
T cell | 8.01e-29 | 25 |
pro-T cell | 8.01e-29 | 25 |
CD8-positive, alpha-beta T cell | 3.74e-26 | 11 |
leukocyte | 3.97e-26 | 136 |
nongranular leukocyte | 1.35e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 2.22e-19 | 120 |
hematopoietic stem cell | 9.87e-19 | 168 |
hematopoietic cell | 3.68e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.08e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-15 | 161 |
B cell | 2.38e-14 | 14 |
CD4-positive, alpha-beta T cell | 4.20e-11 | 6 |
lymphocyte of B lineage | 5.17e-09 | 24 |
pro-B cell | 5.17e-09 | 24 |
natural killer cell | 1.92e-08 | 3 |
pro-NK cell | 1.92e-08 | 3 |
single nucleate cell | 5.41e-08 | 3 |
mononuclear cell | 5.41e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.06e-11 | 4 |
hemolymphoid system gland | 8.06e-11 | 4 |
thymic region | 8.06e-11 | 4 |
pharyngeal gland | 8.06e-11 | 4 |
thymus primordium | 8.06e-11 | 4 |
hemopoietic organ | 8.27e-09 | 7 |
immune organ | 8.27e-09 | 7 |
blood | 1.77e-08 | 15 |
haemolymphatic fluid | 1.77e-08 | 15 |
organism substance | 1.77e-08 | 15 |
pharyngeal epithelium | 3.63e-07 | 6 |