FFCP PHASE1:Hg19::chr4:36246020..36246034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |UniProt=A7E2A5,Q8WZ64 | ||
|association_with_transcript=-41bp_to_NM_015230,uc003gsq.1_5end | |association_with_transcript=-41bp_to_NM_015230,uc003gsq.1_5end | ||
|cluster_id=chr4:36246020..36246034,- | |||
|coexpression_cluster_id=C1522 | |||
|description=CAGE_peak_10_at_ARAP2_5end | |description=CAGE_peak_10_at_ARAP2_5end | ||
|id=chr4:36246020..36246034,- | |id=chr4:36246020..36246034,- | ||
|ontology_enrichment_celltype=CL:0000738!4.49e-30!140;CL:0000542!1.24e-27!53;CL:0000051!1.24e-27!53;CL:0000838!2.98e-27!52;CL:0000037!1.12e-21!172;CL:0000566!1.12e-21!172;CL:0002087!2.48e-21!119;CL:0000988!1.49e-20!182;CL:0002031!3.03e-20!124;CL:0002032!3.98e-18!165;CL:0000837!3.98e-18!165;CL:0000791!1.16e-16!18;CL:0000789!1.16e-16!18;CL:0002420!1.16e-16!18;CL:0002419!1.16e-16!18;CL:0000790!1.16e-16!18;CL:0000084!3.88e-14!25;CL:0000827!3.88e-14!25;CL:0000945!8.90e-12!24;CL:0000826!8.90e-12!24;CL:0000625!9.56e-11!11;CL:0000236!2.34e-09!14;CL:0000624!7.08e-07!6 | |ontology_enrichment_celltype=CL:0000738!4.49e-30!140;CL:0000542!1.24e-27!53;CL:0000051!1.24e-27!53;CL:0000838!2.98e-27!52;CL:0000037!1.12e-21!172;CL:0000566!1.12e-21!172;CL:0002087!2.48e-21!119;CL:0000988!1.49e-20!182;CL:0002031!3.03e-20!124;CL:0002032!3.98e-18!165;CL:0000837!3.98e-18!165;CL:0000791!1.16e-16!18;CL:0000789!1.16e-16!18;CL:0002420!1.16e-16!18;CL:0002419!1.16e-16!18;CL:0000790!1.16e-16!18;CL:0000084!3.88e-14!25;CL:0000827!3.88e-14!25;CL:0000945!8.90e-12!24;CL:0000826!8.90e-12!24;CL:0000625!9.56e-11!11;CL:0000236!2.34e-09!14;CL:0000624!7.08e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.69e-39;18!CL:0000789;9.69e-39;18!CL:0002419;9.69e-39;18!CL:0000084;6.35e-30;25!CL:0000625;1.78e-22;11!CL:0000542;1.54e-20;53!CL:0000624;5.45e-16;6!CL:0000236;1.69e-11;13!CL:0000775;2.64e-09;3!CL:0000623;6.60e-09;3!CL:0002087;7.59e-09;104!CL:0000898;2.03e-08;3!CL:0000094;2.30e-08;8!CL:0000226;3.67e-08;3!CL:0000842;3.67e-08;3!CL:0000784;5.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.84e-39,18;CL:0000789,2.84e-39,18;CL:0002420,2.84e-39,18;CL:0002419,2.84e-39,18;CL:0000790,2.84e-39,18;CL:0000838,2.75e-35,52;CL:0000542,1.85e-34,53;CL:0000051,1.85e-34,53;CL:0000084,2.71e-30,25;CL:0000827,2.71e-30,25;CL:0000738,7.31e-28,136;CL:0000625,6.93e-23,11;CL:0002087,7.70e-22,115;CL:0000037,3.13e-20,168;CL:0000988,1.37e-18,177;CL:0002031,1.15e-16,120;CL:0000624,2.77e-16,6;CL:0002032,6.22e-15,161;CL:0000837,6.22e-15,161;CL:0000236,1.09e-10,14;CL:0000775,2.48e-09,3;CL:0000623,5.67e-09,3;CL:0000825,5.67e-09,3;CL:0000898,1.21e-08,3;CL:0000094,2.42e-08,8;CL:0000226,3.78e-08,3;CL:0000842,3.78e-08,3;CL:0000784,4.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.69e-39;18!CL:0000051;1.54e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.14e-13!115;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102;UBERON:0001869!2.24e-07!32;UBERON:0002780!2.28e-07!41;UBERON:0001890!2.28e-07!41;UBERON:0006240!2.28e-07!41;UBERON:0001893!4.30e-07!34;UBERON:0003080!5.33e-07!42;UBERON:0000178!6.95e-07!15;UBERON:0000179!6.95e-07!15;UBERON:0000463!6.95e-07!15;UBERON:0004177!7.24e-07!7;UBERON:0002791!9.49e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!4.14e-13!115;UBERON:0002390!1.29e-07!102;UBERON:0003061!1.29e-07!102;UBERON:0001869!2.24e-07!32;UBERON:0002780!2.28e-07!41;UBERON:0001890!2.28e-07!41;UBERON:0006240!2.28e-07!41;UBERON:0001893!4.30e-07!34;UBERON:0003080!5.33e-07!42;UBERON:0000178!6.95e-07!15;UBERON:0000179!6.95e-07!15;UBERON:0000463!6.95e-07!15;UBERON:0004177!7.24e-07!7;UBERON:0002791!9.49e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.68e-07;15!UBERON:0000179;2.68e-07;15!UBERON:0000463;2.68e-07;15!UBERON:0002370;6.79e-07;2!UBERON:0005058;6.79e-07;2!UBERON:0009113;6.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.38e-11,4;UBERON:0005058,3.38e-11,4;UBERON:0009113,3.38e-11,4;UBERON:0003295,3.38e-11,4;UBERON:0005562,3.38e-11,4;UBERON:0004177,2.71e-09,7;UBERON:0005057,2.71e-09,7;UBERON:0003351,1.95e-07,6;UBERON:0000178,3.20e-07,15;UBERON:0000179,3.20e-07,15;UBERON:0000463,3.20e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.305653622991805,0.246301768349837,0.550975469195755,0.393364276848904,3.0706351847777,0.619264493264304,0,0,0.369754010166788,0.46480320348181,0.142169232487422,0.293600439334847,0.553995408531877,1.80490002723128,1.30206522429511,0,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,1.0246428261164,0.47296445977717,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.797854630486527,0,0,0,0,1.00499466102697,0,1.08594422352558,0,0.368277635987565,0,0.633765858935825,0,0.209658645508376,0.336985893439485,0.300353785683013,0,0,0.59675003159727,0.365328307529268,1.75996244461323,2.73069305631066,1.77901850772711,2.13365111283254,0.800791974072025,2.87376219977242,0.661044872784862,0,5.12291672198504,3.52342313622563,2.29363936875137,0,1.68152568894461,0.526768169550154,6.49142241375649,3.93010762749165,4.72883447698871,1.00311897234407,1.95553359980154,1.89379122293893,0,1.55974639639243,2.65145316727353,2.65840673500345,1.89562704635511,1.28091319725675,1.95089021339817,2.30213066445147,1.65810010671509,3.18783394308558,2.22429844743091,2.40786745280742,3.1360657141493,2.49280553934646,4.59864592322305,4.46715679127419,4.04831507231205,3.50421955756506,5.85975108470777,1.90090408889675,1.95747654801105,2.94369205655162,1.24930726552346,4.73554504088034,0.821127996921047,7.05623601286563,5.88368430723716,3.91025890483557,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.649094787309367,0.696518949197069,0,1.90792499444274,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,1.7658523976586,0.122988438543114,0,0.329250856225877,1.1240175325762,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,1.00876629594175,4.3346767244424,3.23441362289276,2.95188983443421,0.254094624222463,1.30139853857622,0,0,0,4.49404214368309,8.97484377612075,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.07857100409308,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,1.30151357865721,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,0.952927101831156,0.822724546172388,0,2.16012574895246,0.79312517629427,0,0,0,0.371606350251437,0.432807638929335,2.27653898714925,0.159426272728822,0.199579371432817,0.383010740264733,0,0.324621940274555,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0.562677665642051,0,0.16480387422676,0,0.19924798825107,1.65770349318689,0,0.102268682502155,0.861593638227486,0,0.359473404589307,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,0,0,0.174919999992391,0,0.1137934482855,0,0.709163045303809,0,0,0.173624994933292,0,1.32656082487949,0,0,0,0.658156191461918,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0.973033209536731,0,0,0.370691816839509,0.835375596043643,0.134802265961354,0,0.234264445725339,0.547364367646998,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.484945082442097,0,0,0,0,0.633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.288109595976299,0.248505071130865,0.235694034616795,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0.408610218334727,0,0,0,0.674921674654501,0.77380195455795,0.546746009922222,0.335434687599266,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.747511887973863,0.471612915298998,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0.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| ||
|short_description=p10@ARAP2 | |short_description=p10@ARAP2 | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p10@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | -41bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.84e-39 | 18 |
alpha-beta T cell | 2.84e-39 | 18 |
immature T cell | 2.84e-39 | 18 |
mature T cell | 2.84e-39 | 18 |
immature alpha-beta T cell | 2.84e-39 | 18 |
lymphoid lineage restricted progenitor cell | 2.75e-35 | 52 |
lymphocyte | 1.85e-34 | 53 |
common lymphoid progenitor | 1.85e-34 | 53 |
T cell | 2.71e-30 | 25 |
pro-T cell | 2.71e-30 | 25 |
leukocyte | 7.31e-28 | 136 |
CD8-positive, alpha-beta T cell | 6.93e-23 | 11 |
nongranular leukocyte | 7.70e-22 | 115 |
hematopoietic stem cell | 3.13e-20 | 168 |
hematopoietic cell | 1.37e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 1.15e-16 | 120 |
CD4-positive, alpha-beta T cell | 2.77e-16 | 6 |
hematopoietic oligopotent progenitor cell | 6.22e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.22e-15 | 161 |
B cell | 1.09e-10 | 14 |
neutrophil | 2.48e-09 | 3 |
natural killer cell | 5.67e-09 | 3 |
pro-NK cell | 5.67e-09 | 3 |
naive T cell | 1.21e-08 | 3 |
granulocyte | 2.42e-08 | 8 |
single nucleate cell | 3.78e-08 | 3 |
mononuclear cell | 3.78e-08 | 3 |
plasmacytoid dendritic cell | 4.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.38e-11 | 4 |
hemolymphoid system gland | 3.38e-11 | 4 |
thymic region | 3.38e-11 | 4 |
pharyngeal gland | 3.38e-11 | 4 |
thymus primordium | 3.38e-11 | 4 |
hemopoietic organ | 2.71e-09 | 7 |
immune organ | 2.71e-09 | 7 |
pharyngeal epithelium | 1.95e-07 | 6 |
blood | 3.20e-07 | 15 |
haemolymphatic fluid | 3.20e-07 | 15 |
organism substance | 3.20e-07 | 15 |