FFCP PHASE1:Hg19::chr4:36245700..36245716,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:36245700..36245716,- to FFCP PHASE1:Hg19::chr4:36245700..36245716,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAD6 | |UniProt=D6RAD6 | ||
|association_with_transcript=-139bp_to_ENST00000506189_5end | |||
|cluster_id=chr4:36245700..36245716,- | |||
|coexpression_cluster_id=C1940 | |||
|description=CAGE_peak_13_at_ARAP2_5end | |||
|id=chr4:36245700..36245716,- | |||
|ontology_enrichment_celltype=CL:0000738!4.55e-35!140;CL:0002087!6.94e-30!119;CL:0002031!4.07e-28!124;CL:0000988!4.68e-24!182;CL:0000037!7.01e-24!172;CL:0000566!7.01e-24!172;CL:0002032!1.40e-20!165;CL:0000837!1.40e-20!165;CL:0002057!7.74e-18!42;CL:0000860!6.53e-16!45;CL:0000557!1.38e-14!71;CL:0002009!1.58e-14!65;CL:0000766!2.53e-14!76;CL:0002194!3.10e-14!63;CL:0000576!3.10e-14!63;CL:0000040!3.10e-14!63;CL:0000559!3.10e-14!63;CL:0000838!5.60e-14!52;CL:0000839!6.71e-14!70;CL:0000542!1.65e-13!53;CL:0000051!1.65e-13!53;CL:0000763!9.65e-09!112;CL:0000049!9.65e-09!112;CL:0000084!1.11e-08!25;CL:0000827!1.11e-08!25;CL:0000080!9.27e-08!6;CL:0000451!9.36e-08!10;CL:0000791!9.45e-08!18;CL:0000789!9.45e-08!18;CL:0002420!9.45e-08!18;CL:0002419!9.45e-08!18;CL:0000790!9.45e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000451;2.54e-08;10!CL:0000860;1.20e-07;33!CL:0002057;1.20e-07;33!CL:0000453;2.12e-07;5!CL:0000990;7.46e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.27e-10,136;CL:0000988,6.19e-09,177;CL:0000451,2.11e-08,10;CL:0002087,4.16e-08,115;CL:0002031,1.35e-07,120;CL:0000453,2.66e-07,5;CL:0000860,5.03e-07,42;CL:0002057,5.03e-07,42;CL:0000037,5.54e-07,168;CL:0000990,6.93e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.16e-23!57;UBERON:0005068!8.16e-23!57;UBERON:0006241!8.16e-23!57;UBERON:0007135!8.16e-23!57;UBERON:0007023!2.25e-19!115;UBERON:0002390!5.85e-19!102;UBERON:0003061!5.85e-19!102;UBERON:0002616!4.65e-18!59;UBERON:0003080!3.06e-17!42;UBERON:0002193!3.58e-17!112;UBERON:0002780!1.76e-16!41;UBERON:0001890!1.76e-16!41;UBERON:0006240!1.76e-16!41;UBERON:0000955!4.95e-15!69;UBERON:0006238!4.95e-15!69;UBERON:0002020!5.84e-15!34;UBERON:0003528!5.84e-15!34;UBERON:0001893!6.05e-15!34;UBERON:0003075!7.56e-15!86;UBERON:0007284!7.56e-15!86;UBERON:0002791!3.15e-14!33;UBERON:0005743!6.23e-14!86;UBERON:0001017!9.52e-14!82;UBERON:0002346!1.57e-13!90;UBERON:0001869!3.35e-13!32;UBERON:0000073!3.70e-12!94;UBERON:0001016!3.70e-12!94;UBERON:0002371!1.67e-11!80;UBERON:0003056!5.37e-11!61;UBERON:0001474!2.04e-10!86;UBERON:0002619!9.72e-10!22;UBERON:0001950!1.41e-09!20;UBERON:0002298!2.93e-09!8;UBERON:0002405!3.33e-09!115;UBERON:0000956!6.03e-09!25;UBERON:0000203!6.03e-09!25;UBERON:0000153!2.02e-08!129;UBERON:0007811!2.02e-08!129;UBERON:0004765!2.66e-08!101;UBERON:0001434!2.66e-08!101;UBERON:0002308!3.26e-08!9;UBERON:0000125!3.26e-08!9;UBERON:0000033!3.72e-07!123;UBERON:0004177!8.34e-07!7;UBERON:0003076!8.46e-07!15;UBERON:0003057!8.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.65e-19;41!UBERON:0001890;2.65e-19;41!UBERON:0000073;2.28e-17;53!UBERON:0002616;2.28e-17;53!UBERON:0001893;8.82e-17;34!UBERON:0002791;1.01e-16;32!UBERON:0003528;1.33e-15;34!UBERON:0002020;1.33e-15;34!UBERON:0001869;1.35e-14;32!UBERON:0002420;2.00e-14;9!UBERON:0007245;2.00e-14;9!UBERON:0010009;2.00e-14;9!UBERON:0010011;2.00e-14;9!UBERON:0000454;2.00e-14;9!UBERON:0000125;3.74e-14;9!UBERON:0002308;3.74e-14;9!UBERON:0009663;5.93e-13;7!UBERON:0002619;1.29e-11;22!UBERON:0001950;3.27e-10;20!UBERON:0000956;4.37e-10;25!UBERON:0000203;4.37e-10;25!UBERON:0002298;5.45e-10;6!UBERON:0001897;3.48e-09;2!UBERON:0010225;3.48e-09;2!UBERON:0000955;4.62e-09;68!UBERON:0001017;1.61e-08;75!UBERON:0002771;2.59e-08;2!UBERON:0001875;2.59e-08;2!UBERON:0005162;2.59e-08;2!UBERON:0000122;2.59e-08;2!UBERON:0006514;2.59e-08;2!UBERON:0002021;2.12e-07;5!UBERON:0000349;2.12e-07;5!UBERON:0001016;4.46e-07;83!UBERON:0004732;7.66e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.54e-28,53;UBERON:0002616,3.54e-28,53;UBERON:0001049,2.11e-26,56;UBERON:0005068,2.11e-26,56;UBERON:0006241,2.11e-26,56;UBERON:0007135,2.11e-26,56;UBERON:0002780,9.10e-25,41;UBERON:0001890,9.10e-25,41;UBERON:0003080,9.10e-25,41;UBERON:0006240,9.10e-25,41;UBERON:0000955,1.49e-22,68;UBERON:0006238,1.49e-22,68;UBERON:0001893,1.74e-20,34;UBERON:0003528,1.88e-20,34;UBERON:0002020,1.88e-20,34;UBERON:0002791,4.97e-19,32;UBERON:0003075,3.69e-18,82;UBERON:0007284,3.69e-18,82;UBERON:0001017,3.98e-18,81;UBERON:0001016,1.97e-17,89;UBERON:0003056,2.78e-17,61;UBERON:0002346,4.59e-17,86;UBERON:0001869,2.61e-16,32;UBERON:0002420,7.81e-15,9;UBERON:0007245,7.81e-15,9;UBERON:0010009,7.81e-15,9;UBERON:0010011,7.81e-15,9;UBERON:0000454,7.81e-15,9;UBERON:0000125,1.59e-14,9;UBERON:0002308,1.59e-14,9;UBERON:0009663,1.85e-13,7;UBERON:0010371,3.49e-13,104;UBERON:0007023,5.46e-13,114;UBERON:0002619,1.60e-11,22;UBERON:0010314,2.48e-10,132;UBERON:0001950,3.43e-10,20;UBERON:0000956,5.25e-10,25;UBERON:0000203,5.25e-10,25;UBERON:0002298,5.36e-10,6;UBERON:0001897,2.66e-09,2;UBERON:0010225,2.66e-09,2;UBERON:0001875,8.64e-09,2;UBERON:0006514,8.64e-09,2;UBERON:0002771,2.81e-08,2;UBERON:0005162,3.02e-08,2;UBERON:0000122,3.02e-08,2;UBERON:0002390,3.50e-08,98;UBERON:0003061,3.50e-08,98;UBERON:0002021,2.14e-07,5;UBERON:0000349,2.78e-07,5;UBERON:0002193,4.53e-07,108;UBERON:0004732,7.60e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.236132343941038,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0.309706370895104,2.01384674625505,1.0246428261164,2.83778675866302,0,1.29096936716765,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0,0.639337125799041,0.989553900560148,0.797854630486527,2.98357325372886,0.290209238628584,0,0,2.51248665256743,1.0429658368404,1.08594422352558,1.81619850790011,0.736555271975129,0.632924774881769,0.845021145247767,0.212604299965044,0,0.336985893439485,0.600707571366025,0.32145117339416,1.14005097496499,0.79566670879636,0.730656615058536,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,1.90810750907073,0.569212969109448,0.587237189370939,0,0,0,0,0.393419540227666,1.96505381374582,0.411202997999018,0.334372990781356,0,0.473447805734733,0,0.334231370655521,0.589211814949674,0,0.270803863765016,0.640456598628376,0.130059347559878,0,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.226618685395132,2.68254345521345,0.68725489096526,2.78321661221453,0,0,0.950452044448374,0,0.895906278080929,0,0.947109008176067,0.821127996921047,1.00803371612366,2.13952156626806,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0,1.90792499444274,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,1.37921532141349,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,2.11004124615769,0,0,0,0,0.552567831062295,0,0.102268682502155,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,1.20598527610407,0,0,0,0.724999575434793,0,0,0,0,0,0,0,1.68835014075571,0,0.552896299656123,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,10.971281761183,3.08909847366257,2.8193926366473,1.34802265961354,0,1.87411556580271,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.7727022867646,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,1.80126086612937,1.9166753044879,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,1.1248694577575,0,0.425246896606173,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.19009341568421,0,0,0,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,1.46431517882356,1.251909307065,1.72022758707021,1.44207766997908,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,1.24432592536558,2.14346339723327,1.46151324344699,0.981392365535065,0,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,1.47727217721857,1.41696576325585,1.43670473151436,2.46139637088906,0,0.553258019713743,1.61475645631851,1.42769420259154,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0.607838261565552,0,0.620060389503552,0.824405532520789,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0.460935950223117,0,1.35939465953663,0.789273282754189,0,0,0,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.281951753939561,0.257831551894309,0.499705779624645,0,0,0.0802413666891683,0,0.458729283404541,1.43339583151451,0.157771562193185,0.951880862672806,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,2.48750831837634,2.99955687999496,0,0,0.9688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| ||
|short_description=p13@ARAP2 | |||
}} | }} |
Latest revision as of 14:46, 17 September 2015
Short description: | p13@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ARAP2_5end |
Coexpression cluster: | C1940_migratory_thalamus_cord_globus_substantia_hippocampus_CD14CD16 |
Association with transcript: | -139bp_to_ENST00000506189_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | D6RAD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.27e-10 | 136 |
hematopoietic cell | 6.19e-09 | 177 |
dendritic cell | 2.11e-08 | 10 |
nongranular leukocyte | 4.16e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.35e-07 | 120 |
Langerhans cell | 2.66e-07 | 5 |
classical monocyte | 5.03e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-07 | 42 |
hematopoietic stem cell | 5.54e-07 | 168 |
conventional dendritic cell | 6.93e-07 | 8 |