FFCP PHASE1:Hg19::chr4:36245643..36245697,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:36245643..36245697,- to FFCP PHASE1:Hg19::chr4:36245643..36245697,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAD6 | |UniProt=D6RAD6 | ||
|association_with_transcript=-82bp_to_ENST00000506189_5end | |||
|cluster_id=chr4:36245643..36245697,- | |||
|coexpression_cluster_id=C1940 | |||
|description=CAGE_peak_5_at_ARAP2_5end | |||
|id=chr4:36245643..36245697,- | |||
|ontology_enrichment_celltype=CL:0000738!1.59e-44!140;CL:0002087!1.43e-35!119;CL:0002031!6.64e-35!124;CL:0000037!5.34e-33!172;CL:0000566!5.34e-33!172;CL:0000988!4.81e-32!182;CL:0002032!2.10e-29!165;CL:0000837!2.10e-29!165;CL:0000766!8.39e-26!76;CL:0002057!4.17e-23!42;CL:0000557!2.48e-22!71;CL:0000860!3.64e-22!45;CL:0000839!1.02e-21!70;CL:0002194!1.48e-21!63;CL:0000576!1.48e-21!63;CL:0000040!1.48e-21!63;CL:0000559!1.48e-21!63;CL:0002009!1.67e-21!65;CL:0000763!1.21e-16!112;CL:0000049!1.21e-16!112;CL:0000838!8.26e-13!52;CL:0000542!2.71e-12!53;CL:0000051!2.71e-12!53;CL:0000791!9.07e-09!18;CL:0000789!9.07e-09!18;CL:0002420!9.07e-09!18;CL:0002419!9.07e-09!18;CL:0000790!9.07e-09!18;CL:0000084!3.39e-07!25;CL:0000827!3.39e-07!25;CL:0000625!4.18e-07!11;CL:0002393!8.75e-07!9;CL:0002397!8.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.33e-14;48!CL:0000791;5.57e-13;18!CL:0000789;5.57e-13;18!CL:0002419;5.57e-13;18!CL:0000860;7.00e-13;33!CL:0002057;7.00e-13;33!CL:0000625;6.73e-12;11!CL:0002087;1.30e-10;104!CL:0000766;9.54e-10;69!CL:0000084;1.08e-09;25!CL:0000473;1.30e-09;39!CL:0000234;1.30e-09;39!CL:0002393;2.90e-07;6!CL:0002397;2.90e-07;6!CL:0000738;9.92e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.59e-33,136;CL:0002087,2.03e-27,115;CL:0000988,2.98e-25,177;CL:0000037,3.85e-24,168;CL:0002031,2.02e-23,120;CL:0000860,7.83e-23,42;CL:0002057,7.83e-23,42;CL:0002032,2.43e-20,161;CL:0000837,2.43e-20,161;CL:0000473,2.87e-20,48;CL:0000234,2.87e-20,48;CL:0000766,1.39e-18,72;CL:0002009,2.09e-18,61;CL:0002194,5.46e-18,59;CL:0000576,5.46e-18,59;CL:0000040,5.46e-18,59;CL:0000559,5.46e-18,59;CL:0000557,7.32e-16,67;CL:0000839,4.66e-15,66;CL:0000791,4.94e-13,18;CL:0000789,4.94e-13,18;CL:0002420,4.94e-13,18;CL:0002419,4.94e-13,18;CL:0000790,4.94e-13,18;CL:0000763,2.55e-12,108;CL:0000049,2.55e-12,108;CL:0000625,5.97e-12,11;CL:0002393,6.89e-11,9;CL:0002397,6.89e-11,9;CL:0000084,1.08e-09,25;CL:0000827,1.08e-09,25;CL:0000838,1.96e-08,52;CL:0000542,3.65e-08,53;CL:0000051,3.65e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-16;42!CL:0000790;5.57e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-28!102;UBERON:0003061!1.72e-28!102;UBERON:0007023!3.72e-27!115;UBERON:0002193!1.06e-23!112;UBERON:0001049!2.85e-23!57;UBERON:0005068!2.85e-23!57;UBERON:0006241!2.85e-23!57;UBERON:0007135!2.85e-23!57;UBERON:0002371!4.82e-19!80;UBERON:0002780!1.32e-18!41;UBERON:0001890!1.32e-18!41;UBERON:0006240!1.32e-18!41;UBERON:0002616!6.74e-18!59;UBERON:0003080!8.42e-18!42;UBERON:0001474!2.51e-17!86;UBERON:0002020!7.93e-16!34;UBERON:0003528!7.93e-16!34;UBERON:0001893!8.39e-16!34;UBERON:0001017!1.72e-15!82;UBERON:0002791!3.39e-15!33;UBERON:0005743!6.72e-15!86;UBERON:0001869!3.25e-14!32;UBERON:0000955!5.70e-14!69;UBERON:0006238!5.70e-14!69;UBERON:0004765!1.40e-13!101;UBERON:0001434!1.40e-13!101;UBERON:0002405!1.46e-13!115;UBERON:0003075!6.54e-13!86;UBERON:0007284!6.54e-13!86;UBERON:0000073!1.88e-12!94;UBERON:0001016!1.88e-12!94;UBERON:0002346!5.51e-12!90;UBERON:0002619!1.09e-10!22;UBERON:0003056!1.87e-09!61;UBERON:0000956!2.02e-09!25;UBERON:0000203!2.02e-09!25;UBERON:0001950!2.65e-09!20;UBERON:0002308!1.20e-08!9;UBERON:0000125!1.20e-08!9;UBERON:0002420!2.34e-08!9;UBERON:0007245!2.34e-08!9;UBERON:0010009!2.34e-08!9;UBERON:0010011!2.34e-08!9;UBERON:0000454!2.34e-08!9;UBERON:0000178!1.82e-07!15;UBERON:0000179!1.82e-07!15;UBERON:0000463!1.82e-07!15;UBERON:0009663!3.60e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.34e-18;41!UBERON:0001890;5.34e-18;41!UBERON:0000073;7.07e-18;53!UBERON:0002616;7.07e-18;53!UBERON:0001893;7.96e-17;34!UBERON:0003528;4.66e-16;34!UBERON:0002020;4.66e-16;34!UBERON:0002791;5.69e-16;32!UBERON:0001869;2.23e-15;32!UBERON:0000125;3.92e-14;9!UBERON:0002308;3.92e-14;9!UBERON:0002619;1.40e-11;22!UBERON:0009663;1.42e-11;7!UBERON:0002420;2.52e-11;9!UBERON:0007245;2.52e-11;9!UBERON:0010009;2.52e-11;9!UBERON:0010011;2.52e-11;9!UBERON:0000454;2.52e-11;9!UBERON:0001017;3.50e-10;75!UBERON:0000178;8.24e-10;15!UBERON:0000179;8.24e-10;15!UBERON:0000463;8.24e-10;15!UBERON:0004732;8.92e-10;13!UBERON:0000956;9.28e-10;25!UBERON:0000203;9.28e-10;25!UBERON:0001950;2.07e-09;20!UBERON:0002298;3.81e-09;6!UBERON:0000955;4.07e-09;68!UBERON:0001016;1.28e-08;83!UBERON:0004733;1.62e-08;12!UBERON:0002028;1.62e-08;12!UBERON:0007023;1.94e-08;114!UBERON:0000369;6.08e-07;4!UBERON:0002435;6.08e-07;4!UBERON:0000204;6.08e-07;4!UBERON:0002390;7.64e-07;32 | |||
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| ||
|short_description=p5@ARAP2 | |||
}} | }} |
Latest revision as of 14:46, 17 September 2015
Short description: | p5@ARAP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARAP2_5end |
Coexpression cluster: | C1940_migratory_thalamus_cord_globus_substantia_hippocampus_CD14CD16 |
Association with transcript: | -82bp_to_ENST00000506189_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | D6RAD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data