FFCP PHASE1:Hg19::chr3:195603547..195603555,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10188 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19297 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENST00000478623_5end | |||
|cluster_id=chr3:195603547..195603555,- | |||
|description=CAGE_peak_21_at_TNK2_5end | |||
|id=chr3:195603547..195603555,- | |||
|ontology_enrichment_celltype=CL:0002150!2.09e-20!3;CL:0000861!2.09e-20!3;CL:1000415!5.65e-14!2;CL:0002178!3.49e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.35e-08;3!CL:0000083;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.30e-08,3;CL:0000083,6.50e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!3.45e-15!2;DOID:3493!1.68e-14!2;DOID:299!9.09e-13!25;DOID:305!9.66e-10!106;DOID:8552!1.77e-08!1;DOID:3111!2.04e-08!1;DOID:3603!2.04e-08!1;DOID:0050619!7.10e-08!1;DOID:1357!7.10e-08!1;DOID:162!1.52e-07!235;DOID:14566!2.63e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4929;3.99e-45;2!DOID:3111;1.67e-23;1!DOID:3603;1.67e-23;1!DOID:8552;1.67e-23;1!DOID:299;3.40e-22;25!DOID:8692;1.15e-11;31!DOID:3119;3.18e-07;14!DOID:1240;3.37e-07;39!DOID:1793;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.00e-45,2;DOID:8552,1.34e-23,1;DOID:3111,2.10e-23,1;DOID:3603,2.10e-23,1;DOID:299,3.55e-22,25;DOID:8692,8.72e-12,31;DOID:1240,1.90e-09,39;DOID:0050686,1.09e-07,137;DOID:2531,2.66e-07,51;DOID:0060083,2.66e-07,51;DOID:162,2.69e-07,235;DOID:3119,3.14e-07,14;DOID:14566,3.89e-07,239;DOID:1793,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.28e-09!3;UBERON:0006242!1.28e-09!3;UBERON:0002294!3.85e-09!7;UBERON:0001173!3.85e-09!7;UBERON:0004912!3.85e-09!7;UBERON:0004913!2.19e-08!1;UBERON:0003703!2.19e-08!1;UBERON:0001174!2.19e-08!1;UBERON:0004914!2.19e-08!1;UBERON:0000997!3.11e-08!1;UBERON:0005056!3.11e-08!1;UBERON:0001764!7.10e-08!1;UBERON:0001825!7.10e-08!1;UBERON:0002372!1.14e-07!1;UBERON:0001961!1.14e-07!1;UBERON:0001744!1.14e-07!1;UBERON:0001735!1.14e-07!1;UBERON:0002022!1.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.62e-23;1!UBERON:0003703;2.62e-23;1!UBERON:0001174;2.62e-23;1!UBERON:0004914;2.62e-23;1!UBERON:0002114;1.12e-08;2!UBERON:0002394;8.14e-07;4!UBERON:0003928;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.62e-23,1;UBERON:0003703,2.62e-23,1;UBERON:0001174,2.62e-23,1;UBERON:0004914,2.62e-23,1;UBERON:0002114,1.12e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,4.22961015263549,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65392709320438,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0.0967563312890851,0.438535902517113,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,5.20986172218204,0,0,0,0,0,0 | |||
|short_description=p21@TNK2 | |||
}} |
Latest revision as of 14:37, 17 September 2015
Short description: | p21@TNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000478623_5end |
EntrezGene: | TNK2 |
HGNC: | 19297 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.30e-08 | 3 |
epithelial cell of pancreas | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.62e-23 | 1 |
extrahepatic bile duct | 2.62e-23 | 1 |
common bile duct | 2.62e-23 | 1 |
duodenal papilla | 2.62e-23 | 1 |
duodenum | 1.12e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.00e-45 | 2 |
chronic myeloid leukemia | 1.34e-23 | 1 |
cystadenocarcinoma | 2.10e-23 | 1 |
mucinous cystadenocarcinoma | 2.10e-23 | 1 |
adenocarcinoma | 3.55e-22 | 25 |
myeloid leukemia | 8.72e-12 | 31 |
leukemia | 1.90e-09 | 39 |
organ system cancer | 1.09e-07 | 137 |
hematologic cancer | 2.66e-07 | 51 |
immune system cancer | 2.66e-07 | 51 |
cancer | 2.69e-07 | 235 |
gastrointestinal system cancer | 3.14e-07 | 14 |
disease of cellular proliferation | 3.89e-07 | 239 |
pancreatic cancer | 6.50e-07 | 4 |