FFCP PHASE1:Hg19::chr11:31531446..31531460,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:31531446..31531460,+
|short_description=p2@ELP4
|description=CAGE_peak_2_at_ELP4_5end
|association_with_transcript=149bp_to_uc001mta.1_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26610 | |EntrezGene=26610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1171 | |HGNC=1171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=149bp_to_uc001mta.1_5end | |||
|cluster_id=chr11:31531446..31531460,+ | |||
|description=CAGE_peak_2_at_ELP4_5end | |||
|id=chr11:31531446..31531460,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.93e-15;5!CL:0002321;2.16e-11;15!CL:0000540;4.97e-08;6!CL:0000404;4.97e-08;6!CL:0002563;1.43e-07;4!CL:0000047;2.23e-07;2!CL:0002319;3.08e-07;25!CL:0002253;4.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.10e-15,5;CL:0000047,2.79e-13,8;CL:0000133,1.58e-08,59;CL:0000540,3.78e-08,6;CL:0000031,3.78e-08,6;CL:0000404,3.78e-08,6;CL:0002563,1.15e-07,4;CL:0002319,2.37e-07,25;CL:0002253,3.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;4.97e-08;6 | |||
|ontology_enrichment_disease=DOID:162!8.22e-14!235;DOID:14566!4.51e-13!239;DOID:0050687!9.72e-10!143;DOID:305!1.18e-08!106;DOID:0050686!3.76e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-09;22!DOID:2994;3.26e-09;22!DOID:169;2.93e-08;6!DOID:3119;2.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.34e-09,22;DOID:2994,3.34e-09,22;DOID:169,2.59e-08,6;DOID:162,3.84e-08,235;DOID:14566,8.56e-08,239;DOID:3119,1.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-10!82;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0005743!5.59e-10!86;UBERON:0001049!3.18e-07!57;UBERON:0005068!3.18e-07!57;UBERON:0006241!3.18e-07!57;UBERON:0007135!3.18e-07!57;UBERON:0002780!7.52e-07!41;UBERON:0001890!7.52e-07!41;UBERON:0006240!7.52e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.43e-07;4!UBERON:0001262;1.43e-07;4!UBERON:0004786;1.43e-07;4!UBERON:0004808;1.43e-07;4!UBERON:0001277;1.43e-07;4!UBERON:0000922;8.18e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.30e-08,89;UBERON:0001242,1.15e-07,4;UBERON:0001262,1.15e-07,4;UBERON:0004786,1.15e-07,4;UBERON:0004808,1.15e-07,4;UBERON:0001277,1.15e-07,4;UBERON:0011216,7.62e-07,223 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,1.43117993565528,0.273748850145768,0.627713197974014,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,1.00707360754392,0.426507697462265,0.880801318004542,0.553995408531877,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0.422510572623884,0.425208599930087,0,0.336985893439485,0,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.472674085820339,0,0.43917392846563,0.392937226493138,0,0,0,0.522389211897802,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,1.52054421143703,0,0,0,0.17859945656816,0,0.225222960966644,0,0.949265659568129,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0.213557388818567,0,0,0.206105058476878,0,0,0.168776332241266,0.389748020644795,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,1.70763188581434,2.91565490307268,2.20768491452085,3.42081481550722,1.7662459561294,2.18986415445498,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.330881918197182,1.08939722046203,0.237270619111097,0.404493924480493,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0,3.56666471775029,0,0,0,0,0,0,1.03993478527958,0,0.811512834825538,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0.264145302039678,0.207328115540772,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0,0.43596006883328,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0.197030760201927,0.215627574859517,0.256686072559497,2.54094624222463,3.90419561572865,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,4.3509401852984,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0.0915694648183434,1.07262349896764,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,2.13648142254946,0,0,1.48642540100575,0.432807638929335,0.213425530045242,0,0.59873811429845,0.191505370132367,0.635020748171649,0.649243880549111,0.280797178113459,0.228234679033192,0.313359791546046,0,0.677167111206413,0,0.605399121573143,0.425846237690326,0.343505344755765,0,0,0,0.390776190804081,0,1.23087398947712,0.540911356951966,1.33228787199128,1.4098700508785,0,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0,0,0,11.5889064012967,1.53403023753232,0.123084805461069,0,0.179736702294654,0,0,0.197286811273867,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,2.75794698593172,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,1.47773809476774,1.09692698576986,1.85195387982283,0.278847488557207,0,0,0.23056390438806,0.987334088507493,0.869178975376065,0,0,0.533034776018635,1.02193298195737,0.627921025580099,0.166211681900156,0.902382642468723,0.784250137270958,1.51039428278258,1.3282761290693,0.317873157960757,0.421996129056054,0.326465616318295,4.52329828588611,1.51472047819464,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.417687798021821,0.269604531922708,0.802577647298789,0.468528891450678,0,0.391329237864179,1.94224303627274,0,0,1.22429104652196,0.505492637027904,3.45743864653333,0.622129148383483,0,0,0,0,0.569219092059585,0,0.867798691675654,0,0.174118413160805,0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| ||
|short_description=p2@ELP4 | |||
}} | }} |
Latest revision as of 14:36, 17 September 2015
Short description: | p2@ELP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ELP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 149bp_to_uc001mta.1_5end |
EntrezGene: | ELP4 |
HGNC: | 1171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.10e-15 | 5 |
neuronal stem cell | 2.79e-13 | 8 |
neurectodermal cell | 1.58e-08 | 59 |
neuron | 3.78e-08 | 6 |
neuroblast | 3.78e-08 | 6 |
electrically signaling cell | 3.78e-08 | 6 |
intestinal epithelial cell | 1.15e-07 | 4 |
neural cell | 2.37e-07 | 25 |
epithelial cell of large intestine | 3.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.30e-08 | 89 |
intestinal mucosa | 1.15e-07 | 4 |
wall of intestine | 1.15e-07 | 4 |
gastrointestinal system mucosa | 1.15e-07 | 4 |
gastrointestinal system epithelium | 1.15e-07 | 4 |
intestinal epithelium | 1.15e-07 | 4 |
organ system subdivision | 7.62e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.34e-09 | 22 |
germ cell cancer | 3.34e-09 | 22 |
neuroendocrine tumor | 2.59e-08 | 6 |
cancer | 3.84e-08 | 235 |
disease of cellular proliferation | 8.56e-08 | 239 |
gastrointestinal system cancer | 1.63e-07 | 14 |