FFCP PHASE1:Hg19::chr5:2751785..2751808,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153572 | |EntrezGene=153572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14359 | |HGNC=14359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZI1 | |UniProt=Q9BZI1 | ||
|association_with_transcript=-9bp_to_ENST00000382611_5end | |association_with_transcript=-9bp_to_ENST00000382611_5end | ||
|cluster_id=chr5:2751785..2751808,- | |||
|coexpression_cluster_id=C4493 | |||
|description=CAGE_peak_2_at_IRX2_5end | |description=CAGE_peak_2_at_IRX2_5end | ||
|id=chr5:2751785..2751808,- | |id=chr5:2751785..2751808,- | ||
|ontology_enrichment_celltype=CL:0002076!2.61e-11!43;CL:0002251!6.47e-10!21;CL:0000066!1.72e-09!254;CL:0002620!1.98e-09!23;CL:0002159!1.97e-08!13;CL:0000362!7.14e-07!8 | |ontology_enrichment_celltype=CL:0002076!2.61e-11!43;CL:0002251!6.47e-10!21;CL:0000066!1.72e-09!254;CL:0002620!1.98e-09!23;CL:0002159!1.97e-08!13;CL:0000362!7.14e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-11;23!CL:0002076;3.39e-11;42!CL:0002251;3.44e-11;20!CL:0002159;2.34e-09;14!CL:0000362;1.42e-08;9!CL:0002368;3.07e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.32e-14,42;CL:0000066,2.48e-13,253;CL:0002620,7.62e-12,23;CL:0002251,3.69e-11,20;CL:0002159,2.02e-09,14;CL:0000362,1.47e-08,9;CL:0000223,2.09e-08,58;CL:0000076,2.23e-07,63;CL:0002368,2.99e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.25e-19!95;UBERON:0002199!3.52e-16!45;UBERON:0002416!3.52e-16!45;UBERON:0002097!1.79e-14!40;UBERON:0000475!3.98e-12!365;UBERON:0000064!2.47e-11!219;UBERON:0001004!8.57e-10!72;UBERON:0003076!4.98e-09!15;UBERON:0003057!4.98e-09!15;UBERON:0004923!6.87e-09!57;UBERON:0000915!1.05e-08!52;UBERON:0004121!1.29e-08!169;UBERON:0004733!3.68e-08!12;UBERON:0002028!3.68e-08!12;UBERON:0007277!3.68e-08!12;UBERON:0000924!3.95e-08!173;UBERON:0006601!3.95e-08!173;UBERON:0005178!7.08e-08!34;UBERON:0002224!7.08e-08!34;UBERON:0000062!1.47e-07!511;UBERON:0005157!1.54e-07!51;UBERON:0005181!2.18e-07!35;UBERON:0005631!3.58e-07!14;UBERON:0000158!3.58e-07!14;UBERON:0004732!3.69e-07!13;UBERON:0000468!5.81e-07!659 | |ontology_enrichment_uberon=UBERON:0003102!2.25e-19!95;UBERON:0002199!3.52e-16!45;UBERON:0002416!3.52e-16!45;UBERON:0002097!1.79e-14!40;UBERON:0000475!3.98e-12!365;UBERON:0000064!2.47e-11!219;UBERON:0001004!8.57e-10!72;UBERON:0003076!4.98e-09!15;UBERON:0003057!4.98e-09!15;UBERON:0004923!6.87e-09!57;UBERON:0000915!1.05e-08!52;UBERON:0004121!1.29e-08!169;UBERON:0004733!3.68e-08!12;UBERON:0002028!3.68e-08!12;UBERON:0007277!3.68e-08!12;UBERON:0000924!3.95e-08!173;UBERON:0006601!3.95e-08!173;UBERON:0005178!7.08e-08!34;UBERON:0002224!7.08e-08!34;UBERON:0000062!1.47e-07!511;UBERON:0005157!1.54e-07!51;UBERON:0005181!2.18e-07!35;UBERON:0005631!3.58e-07!14;UBERON:0000158!3.58e-07!14;UBERON:0004732!3.69e-07!13;UBERON:0000468!5.81e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0003102;1.91e-14;50!UBERON:0002199;1.01e-13;46!UBERON:0002416;1.01e-13;46!UBERON:0002097;1.52e-13;41!UBERON:0004733;8.81e-10;12!UBERON:0002028;8.81e-10;12!UBERON:0004732;9.89e-09;13!UBERON:0001003;1.43e-08;15!UBERON:0007376;1.43e-08;15!UBERON:0002680;6.12e-08;9!UBERON:0001895;6.12e-08;9!UBERON:0001044;3.01e-07;6!UBERON:0003293;3.01e-07;6!UBERON:0003294;3.01e-07;6!UBERON:0010047;3.01e-07;6!UBERON:0003408;3.01e-07;6!UBERON:0000167;3.01e-07;6!UBERON:0000161;5.18e-07;19!UBERON:0000166;5.18e-07;19!UBERON:0005178;7.80e-07;34!UBERON:0002224;7.80e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.08e-22,99;UBERON:0002199,1.82e-19,46;UBERON:0002416,1.82e-19,46;UBERON:0002097,3.65e-18,41;UBERON:0001004,3.28e-11,74;UBERON:0004733,6.89e-10,12;UBERON:0002028,6.89e-10,12;UBERON:0007277,6.89e-10,12;UBERON:0003076,7.51e-10,15;UBERON:0003057,7.51e-10,15;UBERON:0005631,4.94e-09,14;UBERON:0000158,4.94e-09,14;UBERON:0004732,7.92e-09,13;UBERON:0001003,1.62e-08,15;UBERON:0007376,1.62e-08,15;UBERON:0007383,1.62e-08,15;UBERON:0004923,3.67e-08,66;UBERON:0002680,4.75e-08,9;UBERON:0001895,4.75e-08,9;UBERON:0010092,4.75e-08,9;UBERON:0000166,6.30e-08,22;UBERON:0005178,1.51e-07,34;UBERON:0002224,1.51e-07,34;UBERON:0000915,2.25e-07,52;UBERON:0001044,3.01e-07,6;UBERON:0003293,3.01e-07,6;UBERON:0003294,3.01e-07,6;UBERON:0010047,3.01e-07,6;UBERON:0000167,3.01e-07,6;UBERON:0005157,3.40e-07,47;UBERON:0005181,3.79e-07,35;UBERON:0003124,6.21e-07,7 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0,1.0007329835313,0,0,2.53299878168311,0.631719873426831,4.96252693579693,2.45733936501509,16.7472280313383,10.4851858622483,9.49561121622433,0.123766352960047,0,0,0,0,0,27.9484801834309,31.0081050691265,28.2109249330279,0.286235987131057,1.36874425072884,0,0,0,0,0,0,0.619264493264304,2.75826367343678,7.53014796945625,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,0,0,0.087834785693126,3.33996642519167,3.64295288292542,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,34.4514301192602,0,0.25326102332916,0.132409180813219,1.14734648299525,0.709336764396714,3.92474320099615,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0,0,7.0296429550139,2.80944069147288,3.4228309292667,6.42629326372745,4.11020745253177,6.31304483035713,5.75848307479219,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.901428353439581,0.340296549480063,5.02290979928813,3.63047560991565,7.84148034290379,15.6047369963889,8.45030739755199,3.86460810068444,2.41951913231067,4.72573730275545,4.48210223741514,4.54380793639406,4.87864462804187,3.87950536365149,5.32514388774922,2.82105875037393,1.86516651541536,7.15065156704198,3.81844568827169,4.01526433544605,8.66013313520127,21.8674117730451,12.2003640012994,9.64047811642945,21.4472723244284,29.5631660851422,3.12899064659632,1.28648187638577,5.52539685409922,3.71494342425583,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,7.01034099695747,0,14.7065382447558,11.240175325762,5.42856451022807,5.27754137403619,6.51616610620649,8.31947828223663,0,0,0,0,0.462985512576611,0.380508304469197,13.4334747653077,12.8772924314231,0,0,0,4.68669169933885,1.84780341018745,0.992425680696705,9.85143749731331,10.4628217865026,11.5014803749563,0,0,0,0.288239906833923,0.12624243342638,0.190493682876507,0,0,3.4214489204541,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0,0,1.28603687131071,11.3479305618623,1.3321108950805,0,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.178428988797162,0,0,0,2.27407504055985,1.03473071292505,0,0.368738337083406,0.695068915744663,0,0.686286847621712,0,0,0,7.88131685760275,13.3148351608398,6.95497674658265,0.744323423456331,0.61384789315225,1.68396056659844,0.128139149255701,2.04682899626681,0,0,4.93471020168498,2.30830242907065,1.72467027628999,0.519254429183621,2.67283870457906,6.76812917713084,1.00253235151642,5.98526428083326,0.114814448164607,0,0,4.96319574198153,1.5403067420883,4.70609861506113,7.30696123266303,2.11103257785751,0,0,0.215915916102139,0,0,0.501689773854853,2.03901018436031,2.49322802678617,5.1491193586101,0,0,0,0,0.325378394664303,6.59462474545423,0.457847324091717,0.41254749960294,11.4853107599234,18.2016868890226,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,6.7766815298001,20.5643372080664,17.7381670367472,19.7257672668322,0.929691098594572,1.25924938732256,1.3940745403212,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0,0,0.974853958525138,1.05650146756755,0,0,1.13008116620243,0,0,0,1.15755106853338,3.27947376023316,0,0,0,0,0,0,0,0,0,6.83051712778287,10.8479763275945,3.07910760721639,7.37332503089366,6.53345909167936,5.74277184738353,1.29151611801369,6.73885902670502,3.54744122829341,0.689170200620878,0,0,0,0,0,0,0,0,0,0,5.88096518354476,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,19.8157922332283,9.2059051058118,11.9792673818701,0,0.562677665642051,0,0,0.211125408127993,1.19548792950642,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0,0,1.11136990144637,0,0,0,7.812832832557,1.48681999993533,15.9499906595655,1.70690172428249,0,19.3837899049708,0,0,0,0,0.482385754501632,1.52581736317083,5.97128003628613,2.65992857058193,0.438770794307945,0,4.1827123283581,0.230850775511391,0,14.0643981676717,18.4900747484131,21.7294743844016,30.3051101745324,3.11431817566332,38.9115386493603,0,0,0,0,0,0,0,0,0,0,5.37141671448975,0.649165919226273,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,4.60564267847575,1.82824333818845,0.698906672968121,0,0,0,0,0.678923115418936,0,5.19755703795225,1.37041924646751,0,0,0,0,0,1.9980960958213,3.31407959454444,0,0,0,0.372757606696298,9.89914945390541,0,0,2.95794831145333,0,0.600420288709789,2.32739144116388,0,0,0,0,0.458320848023367,0,2.79550600698588,0,0.446342914883745,1.41085292222125,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,1.51293380256957,0.415440338029185,0,3.86900977278975,0,10.3984753155772,7.95937643721902,16.8379227913344,0,12.0122517353006,19.1915197319445,0,0,0,0,0,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| ||
|short_description=p2@IRX2 | |short_description=p2@IRX2 | ||
}} | }} |
Latest revision as of 14:04, 17 September 2015
Short description: | p2@IRX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRX2_5end |
Coexpression cluster: | C4493_merkel_non_pancreatic_oral_salivary_teratocarcinoma_large |
Association with transcript: | -9bp_to_ENST00000382611_5end |
EntrezGene: | IRX2 |
HGNC: | 14359 |
UniProt: | Q9BZI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.32e-14 | 42 |
epithelial cell | 2.48e-13 | 253 |
skin fibroblast | 7.62e-12 | 23 |
epithelial cell of alimentary canal | 3.69e-11 | 20 |
general ecto-epithelial cell | 2.02e-09 | 14 |
epidermal cell | 1.47e-08 | 9 |
endodermal cell | 2.09e-08 | 58 |
squamous epithelial cell | 2.23e-07 | 63 |
respiratory epithelial cell | 2.99e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.08e-22 | 99 |
integument | 1.82e-19 | 46 |
integumental system | 1.82e-19 | 46 |
skin of body | 3.65e-18 | 41 |
respiratory system | 3.28e-11 | 74 |
segmental subdivision of hindbrain | 6.89e-10 | 12 |
hindbrain | 6.89e-10 | 12 |
presumptive hindbrain | 6.89e-10 | 12 |
posterior neural tube | 7.51e-10 | 15 |
chordal neural plate | 7.51e-10 | 15 |
extraembryonic membrane | 4.94e-09 | 14 |
membranous layer | 4.94e-09 | 14 |
segmental subdivision of nervous system | 7.92e-09 | 13 |
skin epidermis | 1.62e-08 | 15 |
outer epithelium | 1.62e-08 | 15 |
enveloping layer of ectoderm | 1.62e-08 | 15 |
organ component layer | 3.67e-08 | 66 |
regional part of metencephalon | 4.75e-08 | 9 |
metencephalon | 4.75e-08 | 9 |
future metencephalon | 4.75e-08 | 9 |
oral opening | 6.30e-08 | 22 |
thoracic cavity element | 1.51e-07 | 34 |
thoracic cavity | 1.51e-07 | 34 |
thoracic segment of trunk | 2.25e-07 | 52 |
saliva-secreting gland | 3.01e-07 | 6 |
gland of oral region | 3.01e-07 | 6 |
gland of foregut | 3.01e-07 | 6 |
oral gland | 3.01e-07 | 6 |
oral cavity | 3.01e-07 | 6 |
epithelial fold | 3.40e-07 | 47 |
thoracic segment organ | 3.79e-07 | 35 |
chorion | 6.21e-07 | 7 |