FFCP PHASE1:Hg19::chr19:36346734..36346751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84063 | |EntrezGene=84063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18816 | |HGNC=18816 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWL6 | |UniProt=Q6UWL6 | ||
|association_with_transcript=-10bp_to_BC064925_5end | |association_with_transcript=-10bp_to_BC064925_5end | ||
|cluster_id=chr19:36346734..36346751,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_2_at_KIRREL2_5end | |description=CAGE_peak_2_at_KIRREL2_5end | ||
|id=chr19:36346734..36346751,+ | |id=chr19:36346734..36346751,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.09e-44;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.18e-34!2;UBERON:0002757!2.18e-34!2;UBERON:0010134!2.18e-34!2;UBERON:0002784!2.18e-34!2;UBERON:0005408!2.18e-34!2;UBERON:0001899!2.18e-34!2;UBERON:0003296!9.51e-18!4;UBERON:0010133!9.51e-18!4;UBERON:0000966!1.97e-14!5;UBERON:0005388!1.97e-14!5;UBERON:0001802!1.97e-14!5;UBERON:0001894!1.46e-10!7;UBERON:0006222!1.46e-10!7;UBERON:0000970!3.76e-08!20;UBERON:0002104!8.67e-08!21;UBERON:0000020!3.71e-07!23;UBERON:0001032!7.03e-07!24;UBERON:0004456!7.03e-07!24 | |ontology_enrichment_uberon=UBERON:0001905!2.18e-34!2;UBERON:0002757!2.18e-34!2;UBERON:0010134!2.18e-34!2;UBERON:0002784!2.18e-34!2;UBERON:0005408!2.18e-34!2;UBERON:0001899!2.18e-34!2;UBERON:0003296!9.51e-18!4;UBERON:0010133!9.51e-18!4;UBERON:0000966!1.97e-14!5;UBERON:0005388!1.97e-14!5;UBERON:0001802!1.97e-14!5;UBERON:0001894!1.46e-10!7;UBERON:0006222!1.46e-10!7;UBERON:0000970!3.76e-08!20;UBERON:0002104!8.67e-08!21;UBERON:0000020!3.71e-07!23;UBERON:0001032!7.03e-07!24;UBERON:0004456!7.03e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0000966;2.54e-27;5!UBERON:0005388;2.54e-27;5!UBERON:0001802;2.54e-27;5!UBERON:0001894;7.84e-20;7!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0000019;5.83e-08;19!UBERON:0000047;5.83e-08;19!UBERON:0004088;5.83e-08;19!UBERON:0010230;5.83e-08;19!UBERON:0001456;2.73e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0000966,5.43e-23,6;UBERON:0005388,5.43e-23,6;UBERON:0001802,5.43e-23,6;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000970,7.18e-15,21;UBERON:0002104,7.18e-15,21;UBERON:0000020,4.11e-13,24;UBERON:0001032,4.11e-13,24;UBERON:0004456,4.11e-13,24;UBERON:0003056,4.24e-09,61;UBERON:0000019,1.29e-07,20;UBERON:0000047,1.29e-07,20;UBERON:0010312,1.29e-07,20;UBERON:0004088,1.29e-07,20;UBERON:0010230,1.29e-07,20;UBERON:0003072,1.29e-07,20;UBERON:0004128,1.29e-07,20;UBERON:0003071,1.29e-07,20;UBERON:0001456,5.24e-07,22;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82 | |||
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|short_description=p2@KIRREL2 | |short_description=p2@KIRREL2 | ||
}} | }} |
Latest revision as of 13:59, 17 September 2015
Short description: | p2@KIRREL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIRREL2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -10bp_to_BC064925_5end |
EntrezGene: | KIRREL2 |
HGNC: | 18816 |
UniProt: | Q6UWL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.84e-66 | 2 |
regional part of epithalamus | 2.84e-66 | 2 |
secretory circumventricular organ | 2.84e-66 | 2 |
circumventricular organ | 2.84e-66 | 2 |
epithalamus | 2.84e-66 | 2 |
gland of diencephalon | 8.36e-34 | 4 |
neuroendocrine gland | 8.36e-34 | 4 |
regional part of diencephalon | 8.36e-34 | 4 |
retina | 5.43e-23 | 6 |
photoreceptor array | 5.43e-23 | 6 |
posterior segment of eyeball | 5.43e-23 | 6 |
diencephalon | 7.84e-20 | 7 |
future diencephalon | 7.84e-20 | 7 |
eye | 7.18e-15 | 21 |
visual system | 7.18e-15 | 21 |
sense organ | 4.11e-13 | 24 |
sensory system | 4.11e-13 | 24 |
entire sense organ system | 4.11e-13 | 24 |
pre-chordal neural plate | 4.24e-09 | 61 |
camera-type eye | 1.29e-07 | 20 |
simple eye | 1.29e-07 | 20 |
immature eye | 1.29e-07 | 20 |
ocular region | 1.29e-07 | 20 |
eyeball of camera-type eye | 1.29e-07 | 20 |
optic cup | 1.29e-07 | 20 |
optic vesicle | 1.29e-07 | 20 |
eye primordium | 1.29e-07 | 20 |
face | 5.24e-07 | 22 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |