FFCP PHASE1:Hg19::chr20:62327996..62328013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8771 | |EntrezGene=8771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11921 | |HGNC=11921 | ||
|TSSclassifier=strong | |||
|UniProt=O95407 | |UniProt=O95407 | ||
|association_with_transcript=0bp_to_NM_003823_5end | |association_with_transcript=0bp_to_NM_003823_5end | ||
|cluster_id=chr20:62327996..62328013,+ | |||
|description=CAGE_peak_1_at_TNFRSF6B_5end | |description=CAGE_peak_1_at_TNFRSF6B_5end | ||
|id=chr20:62327996..62328013,+ | |id=chr20:62327996..62328013,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.27e-14!119;CL:0000220!1.33e-13!246;CL:0002321!1.65e-13!248;CL:1000449!9.98e-11!16;CL:1000497!5.92e-10!18;CL:0002518!5.92e-10!18;CL:0000115!2.86e-09!35;CL:0002078!3.05e-09!44;CL:1000507!5.51e-09!12;CL:1000494!5.51e-09!12;CL:0002681!1.31e-08!13;CL:0002584!1.31e-08!13;CL:0000183!1.73e-08!59;CL:0002139!2.13e-08!24;CL:0000213!3.11e-08!57;CL:0000215!3.11e-08!57;CL:0000066!6.58e-08!254 | |ontology_enrichment_celltype=CL:0000222!1.27e-14!119;CL:0000220!1.33e-13!246;CL:0002321!1.65e-13!248;CL:1000449!9.98e-11!16;CL:1000497!5.92e-10!18;CL:0002518!5.92e-10!18;CL:0000115!2.86e-09!35;CL:0002078!3.05e-09!44;CL:1000507!5.51e-09!12;CL:1000494!5.51e-09!12;CL:0002681!1.31e-08!13;CL:0002584!1.31e-08!13;CL:0000183!1.73e-08!59;CL:0002139!2.13e-08!24;CL:0000213!3.11e-08!57;CL:0000215!3.11e-08!57;CL:0000066!6.58e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.25e-11;15!CL:1000497;7.09e-11;17!CL:0002518;7.09e-11;17!CL:0002681;2.65e-09;12!CL:0002584;2.65e-09;12!CL:0000115;3.12e-09;36!CL:1000507;4.00e-09;10!CL:1000494;4.00e-09;10!CL:0002139;4.90e-09;24!CL:0002078;9.66e-08;45!CL:0000213;9.91e-07;58!CL:0000215;9.91e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.65e-15,121;CL:0002321,1.96e-12,250;CL:1000449,1.27e-11,15;CL:0002078,4.61e-11,45;CL:1000497,7.16e-11,17;CL:0002518,7.16e-11,17;CL:0000115,7.30e-11,36;CL:0000213,6.99e-10,58;CL:0000215,6.99e-10,58;CL:0002681,2.69e-09,12;CL:0002584,2.69e-09,12;CL:1000507,3.99e-09,10;CL:1000494,3.99e-09,10;CL:0002139,5.02e-09,24;CL:0000066,1.88e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.97e-34!312;UBERON:0000483!8.71e-33!309;UBERON:0000475!1.43e-23!365;UBERON:0000481!1.87e-22!347;UBERON:0000477!3.71e-22!286;UBERON:0004111!1.08e-21!241;UBERON:0000025!2.40e-17!194;UBERON:0000467!2.25e-16!625;UBERON:0000480!3.98e-16!626;UBERON:0000468!1.54e-15!659;UBERON:0000064!6.23e-15!219;UBERON:0000033!2.98e-14!123;UBERON:0000922!1.14e-13!612;UBERON:0000153!1.29e-13!129;UBERON:0007811!1.29e-13!129;UBERON:0005256!1.75e-13!143;UBERON:0002050!1.97e-13!605;UBERON:0005423!1.97e-13!605;UBERON:0000923!2.13e-13!604;UBERON:0005291!2.13e-13!604;UBERON:0006598!2.13e-13!604;UBERON:0002532!2.13e-13!604;UBERON:0003075!8.94e-13!86;UBERON:0007284!8.94e-13!86;UBERON:0002049!6.45e-12!79;UBERON:0007798!6.45e-12!79;UBERON:0004121!9.17e-12!169;UBERON:0000486!2.55e-11!82;UBERON:0002346!3.42e-11!90;UBERON:0000924!9.66e-11!173;UBERON:0006601!9.66e-11!173;UBERON:0004211!9.98e-11!16;UBERON:0001285!9.98e-11!16;UBERON:0007684!9.98e-11!16;UBERON:0003220!9.98e-11!16;UBERON:0004208!9.98e-11!16;UBERON:0006555!1.52e-10!17;UBERON:0005103!1.52e-10!17;UBERON:0000083!1.52e-10!17;UBERON:0009201!1.52e-10!17;UBERON:0004819!1.52e-10!17;UBERON:0006553!1.52e-10!17;UBERON:0003074!1.52e-10!17;UBERON:0003060!1.52e-10!17;UBERON:0002100!3.21e-10!216;UBERON:0000914!5.35e-10!83;UBERON:0002329!5.35e-10!83;UBERON:0003077!5.35e-10!83;UBERON:0003059!5.35e-10!83;UBERON:0007282!5.35e-10!83;UBERON:0009618!5.35e-10!83;UBERON:0007285!5.35e-10!83;UBERON:0002616!5.76e-10!59;UBERON:0003104!6.19e-10!238;UBERON:0009142!6.19e-10!238;UBERON:0003914!1.21e-09!118;UBERON:0003056!1.29e-09!61;UBERON:0003887!1.80e-09!21;UBERON:0000080!2.19e-09!18;UBERON:0002120!2.19e-09!18;UBERON:0004875!2.19e-09!18;UBERON:0005721!2.19e-09!18;UBERON:0005754!2.19e-09!18;UBERON:0007297!2.19e-09!18;UBERON:0001049!4.18e-09!57;UBERON:0005068!4.18e-09!57;UBERON:0006241!4.18e-09!57;UBERON:0007135!4.18e-09!57;UBERON:0009773!5.51e-09!12;UBERON:0001231!5.51e-09!12;UBERON:0004810!5.51e-09!12;UBERON:0005085!5.85e-09!29;UBERON:0004876!6.27e-09!20;UBERON:0004290!1.27e-08!70;UBERON:0001225!1.31e-08!13;UBERON:0008987!1.31e-08!13;UBERON:0007023!2.20e-08!115;UBERON:0000058!2.47e-08!26;UBERON:0000055!4.74e-08!69;UBERON:0000490!5.90e-08!138;UBERON:0000955!1.58e-07!69;UBERON:0006238!1.58e-07!69;UBERON:0001008!3.14e-07!45;UBERON:0006554!3.23e-07!44;UBERON:0000353!4.07e-07!17;UBERON:0003064!4.66e-07!37;UBERON:0003103!5.29e-07!69;UBERON:0000062!6.61e-07!511;UBERON:0005743!9.62e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.25e-11;15!UBERON:0004819;1.25e-11;15!UBERON:0001285;1.25e-11;15!UBERON:0007684;1.25e-11;15!UBERON:0001225;2.65e-09;12!UBERON:0008987;2.65e-09;12!UBERON:0004211;4.00e-09;10!UBERON:0009773;4.00e-09;10!UBERON:0001231;4.00e-09;10!UBERON:0004810;4.00e-09;10!UBERON:0000353;8.45e-09;15!UBERON:0006554;2.09e-08;30!UBERON:0001008;2.09e-08;30!UBERON:0010371;1.04e-07;31!UBERON:0001851;4.78e-07;15!UBERON:0001801;7.97e-07;14!UBERON:0007196;9.72e-07;15!UBERON:0001558;9.72e-07;15 | |||
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| ||
|short_description=p1@TNFRSF6B | |short_description=p1@TNFRSF6B | ||
}} | }} |
Latest revision as of 13:53, 17 September 2015
Short description: | p1@TNFRSF6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF6B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003823_5end |
EntrezGene: | TNFRSF6B |
HGNC: | 11921 |
UniProt: | O95407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.65e-15 | 121 |
embryonic cell | 1.96e-12 | 250 |
epithelial cell of nephron | 1.27e-11 | 15 |
meso-epithelial cell | 4.61e-11 | 45 |
kidney cell | 7.16e-11 | 17 |
kidney epithelial cell | 7.16e-11 | 17 |
endothelial cell | 7.30e-11 | 36 |
lining cell | 6.99e-10 | 58 |
barrier cell | 6.99e-10 | 58 |
kidney cortical cell | 2.69e-09 | 12 |
renal cortical epithelial cell | 2.69e-09 | 12 |
kidney tubule cell | 3.99e-09 | 10 |
nephron tubule epithelial cell | 3.99e-09 | 10 |
endothelial cell of vascular tree | 5.02e-09 | 24 |
epithelial cell | 1.88e-08 | 253 |