FFCP PHASE1:Hg19::chr15:41120932..41120960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54866 | |EntrezGene=54866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14953 | |HGNC=14953 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXH3,E9PAT1,Q4V755 | |UniProt=Q9NXH3,E9PAT1,Q4V755 | ||
|association_with_transcript=-25bp_to_ENST00000299174,ENST00000427255,NM_001130143,NM_017726,uc001zmy.2,uc001zmz.2_5end | |association_with_transcript=-25bp_to_ENST00000299174,ENST00000427255,NM_001130143,NM_017726,uc001zmy.2,uc001zmz.2_5end | ||
|cluster_id=chr15:41120932..41120960,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_2_at_PPP1R14D_5end | |description=CAGE_peak_2_at_PPP1R14D_5end | ||
|id=chr15:41120932..41120960,- | |id=chr15:41120932..41120960,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.23e-14;1!UBERON:0006242;1.84e-14;1 | |||
|ontology_enrichment_disease=DOID:305!8.47e-15!106;DOID:4929!2.60e-10!2;DOID:0050687!8.95e-10!143;DOID:299!1.46e-08!25 | |ontology_enrichment_disease=DOID:305!8.47e-15!106;DOID:4929!2.60e-10!2;DOID:0050687!8.95e-10!143;DOID:299!1.46e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.03e-08;2!DOID:4468;8.60e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.52e-08,2;DOID:4468,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!3.60e-23!27;UBERON:0005409!1.75e-20!35;UBERON:0004921!1.88e-17!129;UBERON:0004185!1.88e-17!129;UBERON:0001007!1.90e-16!155;UBERON:0001555!1.90e-16!155;UBERON:0007026!1.90e-16!155;UBERON:0000059!3.84e-16!11;UBERON:0004119!1.35e-14!169;UBERON:0000925!1.35e-14!169;UBERON:0006595!1.35e-14!169;UBERON:0001155!5.56e-14!9;UBERON:0001737!8.46e-13!9;UBERON:0002294!3.46e-11!7;UBERON:0001173!3.46e-11!7;UBERON:0004912!3.46e-11!7;UBERON:0000077!5.43e-10!130;UBERON:0004907!1.50e-09!5;UBERON:0009497!1.74e-08!25;UBERON:0000015!1.74e-08!25;UBERON:0002423!1.74e-08!25;UBERON:0006235!1.74e-08!25;UBERON:0004161!1.74e-08!25;UBERON:0002108!4.32e-08!14;UBERON:0000481!4.76e-08!347;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3;UBERON:0009854!5.67e-07!23;UBERON:0003929!6.17e-07!54;UBERON:0000063!9.49e-07!97 | |ontology_enrichment_uberon=UBERON:0000160!3.60e-23!27;UBERON:0005409!1.75e-20!35;UBERON:0004921!1.88e-17!129;UBERON:0004185!1.88e-17!129;UBERON:0001007!1.90e-16!155;UBERON:0001555!1.90e-16!155;UBERON:0007026!1.90e-16!155;UBERON:0000059!3.84e-16!11;UBERON:0004119!1.35e-14!169;UBERON:0000925!1.35e-14!169;UBERON:0006595!1.35e-14!169;UBERON:0001155!5.56e-14!9;UBERON:0001737!8.46e-13!9;UBERON:0002294!3.46e-11!7;UBERON:0001173!3.46e-11!7;UBERON:0004912!3.46e-11!7;UBERON:0000077!5.43e-10!130;UBERON:0004907!1.50e-09!5;UBERON:0009497!1.74e-08!25;UBERON:0000015!1.74e-08!25;UBERON:0002423!1.74e-08!25;UBERON:0006235!1.74e-08!25;UBERON:0004161!1.74e-08!25;UBERON:0002108!4.32e-08!14;UBERON:0000481!4.76e-08!347;UBERON:0002110!1.93e-07!3;UBERON:0006242!1.93e-07!3;UBERON:0009854!5.67e-07!23;UBERON:0003929!6.17e-07!54;UBERON:0000063!9.49e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.00e-46;17!UBERON:0005409;1.89e-36;22!UBERON:0000059;2.50e-30;11!UBERON:0002108;7.39e-25;4!UBERON:0001155;3.93e-24;9!UBERON:0004921;9.64e-23;33!UBERON:0001154;1.23e-14;1!UBERON:0001153;1.23e-14;1!UBERON:0009854;1.23e-14;1!UBERON:0004907;1.42e-11;5!UBERON:0001555;2.34e-09;54!UBERON:0001007;1.42e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-46,17;UBERON:0005409,3.54e-32,25;UBERON:0000059,2.50e-30,11;UBERON:0002108,7.39e-25,4;UBERON:0001155,3.93e-24,9;UBERON:0001154,1.23e-14,1;UBERON:0001153,1.23e-14,1;UBERON:0001045,1.23e-14,1;UBERON:0004907,1.42e-11,5;UBERON:0004921,4.00e-08,118;UBERON:0001007,5.41e-08,145;UBERON:0001555,5.41e-08,145;UBERON:0007026,5.41e-08,145;UBERON:0004119,3.92e-07,160;UBERON:0000925,3.92e-07,160;UBERON:0006595,3.92e-07,160 | |||
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|short_description=p2@PPP1R14D | |short_description=p2@PPP1R14D | ||
}} | }} |
Latest revision as of 13:53, 17 September 2015
Short description: | p2@PPP1R14D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R14D_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -25bp_to_ENST00000299174, ENST00000427255, NM_001130143, NM_017726, uc001zmy.2, uc001zmz.2_5end |
EntrezGene: | PPP1R14D |
HGNC: | 14953 |
UniProt: | Q9NXH3E9PAT1Q4V755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.00e-46 | 17 |
gastrointestinal system | 3.54e-32 | 25 |
large intestine | 2.50e-30 | 11 |
small intestine | 7.39e-25 | 4 |
colon | 3.93e-24 | 9 |
vermiform appendix | 1.23e-14 | 1 |
caecum | 1.23e-14 | 1 |
midgut | 1.23e-14 | 1 |
lower digestive tract | 1.42e-11 | 5 |
subdivision of digestive tract | 4.00e-08 | 118 |
digestive system | 5.41e-08 | 145 |
digestive tract | 5.41e-08 | 145 |
primitive gut | 5.41e-08 | 145 |
endoderm-derived structure | 3.92e-07 | 160 |
endoderm | 3.92e-07 | 160 |
presumptive endoderm | 3.92e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.52e-08 | 2 |
clear cell adenocarcinoma | 8.04e-08 | 2 |