FFCP PHASE1:Hg19::chr11:30252549..30252565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2488 | |EntrezGene=2488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3964 | |HGNC=3964 | ||
|TSSclassifier=strong | |||
|UniProt=P01225 | |UniProt=P01225 | ||
|association_with_transcript=0bp_to_ENST00000254122,ENST00000417547,NM_000510,NM_001018080,uc001msl.2,uc001msm.2_5end | |association_with_transcript=0bp_to_ENST00000254122,ENST00000417547,NM_000510,NM_001018080,uc001msl.2,uc001msm.2_5end | ||
|cluster_id=chr11:30252549..30252565,+ | |||
|coexpression_cluster_id=C155 | |||
|description=CAGE_peak_1_at_FSHB_5end | |description=CAGE_peak_1_at_FSHB_5end | ||
|id=chr11:30252549..30252565,+ | |id=chr11:30252549..30252565,+ | ||
|ontology_enrichment_celltype=CL:0000667!7.58e-07!6;CL:0000058!7.58e-07!6;CL:0000138!7.58e-07!6 | |ontology_enrichment_celltype=CL:0000667!7.58e-07!6;CL:0000058!7.58e-07!6;CL:0000138!7.58e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.45e-12;6!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.45e-12,6;CL:0000138,2.45e-12,6;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!2.58e-34!1;DOID:4549!2.58e-34!1;DOID:5861!2.58e-34!1;DOID:6496!2.58e-34!1;DOID:201!7.58e-07!6;DOID:0060100!7.58e-07!6 | |ontology_enrichment_disease=DOID:3371!2.58e-34!1;DOID:4549!2.58e-34!1;DOID:5861!2.58e-34!1;DOID:6496!2.58e-34!1;DOID:201!7.58e-07!6;DOID:0060100!7.58e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3371;2.39e-66;1!DOID:4549;2.39e-66;1!DOID:5861;2.39e-66;1!DOID:6496;2.39e-66;1!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.39e-66,1;DOID:4549,2.39e-66,1;DOID:5861,2.39e-66,1;DOID:6496,2.39e-66,1;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000007!1.04e-66!2;UBERON:0003296!5.06e-34!4;UBERON:0010133!5.06e-34!4;UBERON:0007190!9.85e-34!1;UBERON:0001894!5.89e-20!7;UBERON:0006222!5.89e-20!7;UBERON:0001954!9.07e-18!2;UBERON:0003022!9.07e-18!2;UBERON:0002421!9.07e-18!2;UBERON:0002600!9.07e-18!2;UBERON:0001049!1.15e-14!57;UBERON:0005068!1.15e-14!57;UBERON:0006241!1.15e-14!57;UBERON:0007135!1.15e-14!57;UBERON:0002616!3.41e-14!59;UBERON:0002780!3.76e-13!41;UBERON:0001890!3.76e-13!41;UBERON:0006240!3.76e-13!41;UBERON:0003080!7.37e-13!42;UBERON:0002418!2.07e-12!3;UBERON:0004755!2.07e-12!3;UBERON:0001896!2.89e-12!3;UBERON:0005290!2.89e-12!3;UBERON:0010096!2.89e-12!3;UBERON:0000955!4.53e-12!69;UBERON:0006238!4.53e-12!69;UBERON:0001017!2.85e-10!82;UBERON:0003075!6.24e-10!86;UBERON:0007284!6.24e-10!86;UBERON:0005743!8.00e-10!86;UBERON:0002346!1.64e-09!90;UBERON:0003056!4.34e-09!61;UBERON:0000073!5.99e-09!94;UBERON:0001016!5.99e-09!94;UBERON:0000349!6.55e-08!5;UBERON:0007023!1.32e-07!115;UBERON:0000033!5.05e-07!123;UBERON:0000200!9.49e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.99e-131;2!UBERON:0003296;3.35e-66;4!UBERON:0010133;3.35e-66;4!UBERON:0001894;1.80e-38;7!UBERON:0002418;3.27e-23;3!UBERON:0004755;3.27e-23;3!UBERON:0002368;1.26e-08;33!UBERON:0002780;4.47e-07;41!UBERON:0001890;4.47e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.99e-131,2;UBERON:0003296,3.35e-66,4;UBERON:0010133,3.35e-66,4;UBERON:0001894,1.80e-38,7;UBERON:0006222,1.80e-38,7;UBERON:0002418,3.27e-23,3;UBERON:0004755,3.27e-23,3;UBERON:0002368,1.14e-08,35;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41;UBERON:0000949,5.58e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,218.433913561463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1233.96107341307,42.5728297826927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,218.433913561463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,1233.96107341307,42.5728297826927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@FSHB | |short_description=p1@FSHB | ||
}} | }} |
Latest revision as of 13:44, 17 September 2015
Short description: | p1@FSHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FSHB_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 0bp_to_ENST00000254122, ENST00000417547, NM_000510, NM_001018080, uc001msl.2, uc001msm.2_5end |
EntrezGene: | FSHB |
HGNC: | 3964 |
UniProt: | P01225 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.45e-12 | 6 |
chondrocyte | 2.45e-12 | 6 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.99e-131 | 2 |
gland of diencephalon | 3.35e-66 | 4 |
neuroendocrine gland | 3.35e-66 | 4 |
diencephalon | 1.80e-38 | 7 |
future diencephalon | 1.80e-38 | 7 |
cartilage tissue | 3.27e-23 | 3 |
skeletal tissue | 3.27e-23 | 3 |
endocrine gland | 1.14e-08 | 35 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |
endocrine system | 5.58e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.39e-66 | 1 |
extraosseous chondrosarcoma | 2.39e-66 | 1 |
myxoid chondrosarcoma | 2.39e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 2.39e-66 | 1 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |