FFCP PHASE1:Hg19::chr1:32138798..32138820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |EntrezGene=1307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |HGNC=2193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000479100_5end | |association_with_transcript=6bp_to_ENST00000479100_5end | ||
|cluster_id=chr1:32138798..32138820,- | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_13_at_COL16A1_5end | |description=CAGE_peak_13_at_COL16A1_5end | ||
|id=chr1:32138798..32138820,- | |id=chr1:32138798..32138820,- | ||
|ontology_enrichment_celltype=CL:0000188!4.63e-13!9 | |ontology_enrichment_celltype=CL:0000188!4.63e-13!9 | ||
|ontology_enrichment_celltype_v019=CL:0002575;6.43e-14;2!CL:0000632;1.35e-09;3!CL:0000669;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,6.43e-14,2;CL:0000632,1.19e-09,3;CL:0000669,1.31e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.22e-26;1!UBERON:0003056;1.35e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.89e-21!115;UBERON:0000955!8.58e-14!69;UBERON:0006238!8.58e-14!69;UBERON:0001893!1.09e-13!34;UBERON:0002020!1.23e-13!34;UBERON:0003528!1.23e-13!34;UBERON:0000073!1.81e-13!94;UBERON:0001016!1.81e-13!94;UBERON:0002780!8.10e-13!41;UBERON:0001890!8.10e-13!41;UBERON:0006240!8.10e-13!41;UBERON:0005743!1.26e-12!86;UBERON:0000200!1.41e-12!6;UBERON:0001869!1.44e-12!32;UBERON:0003080!1.94e-12!42;UBERON:0001950!2.35e-12!20;UBERON:0001017!4.06e-12!82;UBERON:0002791!4.45e-12!33;UBERON:0002616!5.15e-12!59;UBERON:0003056!1.02e-11!61;UBERON:0002619!4.10e-11!22;UBERON:0001049!5.38e-11!57;UBERON:0005068!5.38e-11!57;UBERON:0006241!5.38e-11!57;UBERON:0007135!5.38e-11!57;UBERON:0002346!8.33e-11!90;UBERON:0003075!2.82e-10!86;UBERON:0007284!2.82e-10!86;UBERON:0002771!6.85e-10!3;UBERON:0000956!1.30e-09!25;UBERON:0000203!1.30e-09!25;UBERON:0001871!1.75e-09!7;UBERON:0000153!1.85e-09!129;UBERON:0007811!1.85e-09!129;UBERON:0000033!3.31e-09!123;UBERON:0000924!1.92e-08!173;UBERON:0006601!1.92e-08!173;UBERON:0004121!5.56e-08!169;UBERON:0000475!5.65e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!9.89e-21!115;UBERON:0000955!8.58e-14!69;UBERON:0006238!8.58e-14!69;UBERON:0001893!1.09e-13!34;UBERON:0002020!1.23e-13!34;UBERON:0003528!1.23e-13!34;UBERON:0000073!1.81e-13!94;UBERON:0001016!1.81e-13!94;UBERON:0002780!8.10e-13!41;UBERON:0001890!8.10e-13!41;UBERON:0006240!8.10e-13!41;UBERON:0005743!1.26e-12!86;UBERON:0000200!1.41e-12!6;UBERON:0001869!1.44e-12!32;UBERON:0003080!1.94e-12!42;UBERON:0001950!2.35e-12!20;UBERON:0001017!4.06e-12!82;UBERON:0002791!4.45e-12!33;UBERON:0002616!5.15e-12!59;UBERON:0003056!1.02e-11!61;UBERON:0002619!4.10e-11!22;UBERON:0001049!5.38e-11!57;UBERON:0005068!5.38e-11!57;UBERON:0006241!5.38e-11!57;UBERON:0007135!5.38e-11!57;UBERON:0002346!8.33e-11!90;UBERON:0003075!2.82e-10!86;UBERON:0007284!2.82e-10!86;UBERON:0002771!6.85e-10!3;UBERON:0000956!1.30e-09!25;UBERON:0000203!1.30e-09!25;UBERON:0001871!1.75e-09!7;UBERON:0000153!1.85e-09!129;UBERON:0007811!1.85e-09!129;UBERON:0000033!3.31e-09!123;UBERON:0000924!1.92e-08!173;UBERON:0006601!1.92e-08!173;UBERON:0004121!5.56e-08!169;UBERON:0000475!5.65e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.46e-13;2!UBERON:0002757;1.46e-13;2!UBERON:0010134;1.46e-13;2!UBERON:0005408;1.46e-13;2!UBERON:0001899;1.46e-13;2!UBERON:0003296;1.98e-07;4!UBERON:0010133;1.98e-07;4!UBERON:0002784;1.98e-07;4!UBERON:0001134;3.39e-07;16!UBERON:0002036;3.39e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.37e-13,2;UBERON:0002757,1.37e-13,2;UBERON:0010134,1.37e-13,2;UBERON:0005408,1.37e-13,2;UBERON:0001899,1.37e-13,2;UBERON:0003296,1.92e-07,4;UBERON:0010133,1.92e-07,4;UBERON:0002784,1.92e-07,4 | |||
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| ||
|short_description=p13@COL16A1 | |short_description=p13@COL16A1 | ||
}} | }} |
Latest revision as of 13:42, 17 September 2015
Short description: | p13@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_COL16A1_5end |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | 6bp_to_ENST00000479100_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 6.43e-14 | 2 |
hepatic stellate cell | 1.19e-09 | 3 |
pericyte cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.37e-13 | 2 |
regional part of epithalamus | 1.37e-13 | 2 |
secretory circumventricular organ | 1.37e-13 | 2 |
circumventricular organ | 1.37e-13 | 2 |
epithalamus | 1.37e-13 | 2 |
gland of diencephalon | 1.92e-07 | 4 |
neuroendocrine gland | 1.92e-07 | 4 |
regional part of diencephalon | 1.92e-07 | 4 |