FFCP PHASE1:Hg19::chr8:22844913..22844935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |||
|association_with_transcript=0bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |||
|cluster_id=chr8:22844913..22844935,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_13_at_RHOBTB2_5end | |||
|id=chr8:22844913..22844935,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.51e-10!3;CL:0002150!3.75e-09!3;CL:0000861!3.75e-09!3;CL:0000039!9.80e-08!7;CL:0000586!9.80e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.76e-21;3!CL:0000039;2.32e-20;7!CL:0000586;2.32e-20;7!CL:1000415;7.21e-09;2!CL:0000349;7.54e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.96e-21,3;CL:0000039,2.03e-20,7;CL:0000586,2.03e-20,7;CL:1000415,5.94e-09,2;CL:0000349,7.63e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.18e-31;2!UBERON:0005754;8.19e-17;1 | |||
|ontology_enrichment_disease=DOID:305!7.88e-09!106;DOID:0050687!2.38e-08!143;DOID:114!1.36e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1799;6.47e-17;1!DOID:10165;6.47e-17;1!DOID:1798;6.47e-17;1!DOID:3095;7.03e-07;22!DOID:2994;7.03e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.47e-17,1;DOID:10165,6.47e-17,1;DOID:1798,6.47e-17,1;DOID:3095,6.75e-07,22;DOID:2994,6.75e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003101!2.74e-12!22;UBERON:0000079!2.74e-12!22;UBERON:0006947!6.21e-11!3;UBERON:0004054!6.21e-11!3;UBERON:0003135!3.36e-10!11;UBERON:0000476!3.51e-10!3;UBERON:0000920!3.51e-10!3;UBERON:0000077!6.65e-09!130;UBERON:0004921!8.77e-09!129;UBERON:0004185!8.77e-09!129;UBERON:0008947!1.22e-08!38;UBERON:0003258!1.22e-08!38;UBERON:0001007!1.28e-08!155;UBERON:0001555!1.28e-08!155;UBERON:0007026!1.28e-08!155;UBERON:0005904!2.80e-08!4;UBERON:0005157!3.87e-08!51;UBERON:0004119!3.88e-08!169;UBERON:0000925!3.88e-08!169;UBERON:0006595!3.88e-08!169;UBERON:0005177!4.37e-08!107;UBERON:0005631!1.25e-07!14;UBERON:0000158!1.25e-07!14;UBERON:0005153!1.93e-07!37;UBERON:0003124!1.94e-07!7;UBERON:0005911!2.02e-07!82;UBERON:0000062!3.37e-07!511;UBERON:0001048!5.07e-07!168;UBERON:0000466!5.24e-07!126;UBERON:0003127!7.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.65e-46;3!UBERON:0004054;1.65e-46;3!UBERON:0005904;4.23e-35;4!UBERON:0003124;1.76e-21;3!UBERON:0000920;1.76e-21;3!UBERON:0001000;5.53e-17;1!UBERON:0005352;5.53e-17;1!UBERON:0000998;8.19e-17;1!UBERON:0006868;8.19e-17;1!UBERON:0001301;2.08e-16;1!UBERON:0000058;1.77e-14;10!UBERON:0005631;2.17e-14;10!UBERON:0000158;2.17e-14;10!UBERON:0003135;3.21e-13;11!UBERON:0004175;3.42e-07;21!UBERON:0003101;6.89e-07;22!UBERON:0000079;6.89e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.92e-46,3;UBERON:0004054,1.92e-46,3;UBERON:0005904,4.75e-35,4;UBERON:0000920,1.96e-21,3;UBERON:0001000,5.53e-17,1;UBERON:0005352,5.53e-17,1;UBERON:0000998,7.57e-17,1;UBERON:0006868,7.57e-17,1;UBERON:0001301,2.63e-16,1;UBERON:0003135,3.34e-13,11;UBERON:0005631,1.90e-10,14;UBERON:0000158,1.90e-10,14;UBERON:0003124,9.52e-10,7;UBERON:0000058,6.94e-08,19;UBERON:0000080,1.02e-07,9;UBERON:0002120,1.02e-07,9;UBERON:0004875,1.02e-07,9;UBERON:0005721,1.02e-07,9;UBERON:0005754,1.02e-07,9;UBERON:0007297,1.02e-07,9;UBERON:0005172,5.13e-07,54;UBERON:0005173,5.13e-07,54;UBERON:0003101,7.03e-07,22;UBERON:0000079,7.03e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,1.53580351049616,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,2.69272933229316,15.9711636725352,2.55200927785536,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,10.6537788769335,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.22308667769421,0,0.0967563312890851,0.438535902517113,0.0821154570532092,0,0,0,0,0,0,1.95551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.798716001995964,0.858452096273142,0.223171457441873,0.739018197353989,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.682008283964155,0.803892390468535,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@RHOBTB2 | |||
}} |
Latest revision as of 13:00, 17 September 2015
Short description: | p13@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RHOBTB2_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.96e-21 | 3 |
germ line cell | 2.03e-20 | 7 |
germ cell | 2.03e-20 | 7 |
epithelial cell of gall bladder | 5.94e-09 | 2 |
extraembryonic cell | 7.63e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.92e-46 | 3 |
internal male genitalia | 1.92e-46 | 3 |
duct of male reproductive system | 4.75e-35 | 4 |
egg chorion | 1.96e-21 | 3 |
vas deferens | 5.53e-17 | 1 |
spermatic cord | 5.53e-17 | 1 |
seminal vesicle | 7.57e-17 | 1 |
seminal fluid secreting gland | 7.57e-17 | 1 |
epididymis | 2.63e-16 | 1 |
male reproductive organ | 3.34e-13 | 11 |
extraembryonic membrane | 1.90e-10 | 14 |
membranous layer | 1.90e-10 | 14 |
chorion | 9.52e-10 | 7 |
duct | 6.94e-08 | 19 |
mesonephros | 1.02e-07 | 9 |
pronephros | 1.02e-07 | 9 |
nephrogenic cord | 1.02e-07 | 9 |
pronephric mesoderm | 1.02e-07 | 9 |
rostral part of nephrogenic cord | 1.02e-07 | 9 |
presumptive pronephric mesoderm | 1.02e-07 | 9 |
abdomen element | 5.13e-07 | 54 |
abdominal segment element | 5.13e-07 | 54 |
male organism | 7.03e-07 | 22 |
male reproductive system | 7.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.47e-17 | 1 |
endocrine pancreas cancer | 6.47e-17 | 1 |
pancreatic endocrine carcinoma | 6.47e-17 | 1 |
germ cell and embryonal cancer | 6.75e-07 | 22 |
germ cell cancer | 6.75e-07 | 22 |