FFCP PHASE1:Hg19::chr6:28555605..28555619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114821 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13851 | |||
|TSSclassifier=strong | |||
|UniProt=Q6R2W3 | |||
|association_with_transcript=-493bp_to_ENST00000452236,NM_052923,uc003nlo.2_5end | |||
|cluster_id=chr6:28555605..28555619,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_3_at_SCAND3_5end | |||
|id=chr6:28555605..28555619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.14e-13;2!UBERON:0006215;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.88e-26!34;UBERON:0003528!4.88e-26!34;UBERON:0001893!9.39e-26!34;UBERON:0001869!1.04e-25!32;UBERON:0001049!3.01e-25!57;UBERON:0005068!3.01e-25!57;UBERON:0006241!3.01e-25!57;UBERON:0007135!3.01e-25!57;UBERON:0002791!2.23e-24!33;UBERON:0002616!4.67e-24!59;UBERON:0002619!5.19e-24!22;UBERON:0000955!4.21e-23!69;UBERON:0006238!4.21e-23!69;UBERON:0001017!5.39e-23!82;UBERON:0002780!3.06e-22!41;UBERON:0001890!3.06e-22!41;UBERON:0006240!3.06e-22!41;UBERON:0003075!1.22e-21!86;UBERON:0007284!1.22e-21!86;UBERON:0003080!1.56e-21!42;UBERON:0005743!2.15e-21!86;UBERON:0000073!1.12e-20!94;UBERON:0001016!1.12e-20!94;UBERON:0001950!1.28e-20!20;UBERON:0000956!1.46e-20!25;UBERON:0000203!1.46e-20!25;UBERON:0002346!3.70e-20!90;UBERON:0003056!5.15e-19!61;UBERON:0000033!3.99e-16!123;UBERON:0007023!8.87e-16!115;UBERON:0000153!8.29e-15!129;UBERON:0007811!8.29e-15!129;UBERON:0004121!1.84e-12!169;UBERON:0000200!7.06e-12!6;UBERON:0000924!7.11e-12!173;UBERON:0006601!7.11e-12!173;UBERON:0000349!1.88e-10!5;UBERON:0001871!6.94e-09!7;UBERON:0000481!1.31e-08!347;UBERON:0000475!2.18e-08!365;UBERON:0000483!4.26e-08!309;UBERON:0000369!5.50e-08!4;UBERON:0002435!5.50e-08!4;UBERON:0000204!5.50e-08!4;UBERON:0010082!5.50e-08!4;UBERON:0000119!7.17e-08!312;UBERON:0002420!2.01e-07!9;UBERON:0007245!2.01e-07!9;UBERON:0010009!2.01e-07!9;UBERON:0010011!2.01e-07!9;UBERON:0000454!2.01e-07!9;UBERON:0000025!4.66e-07!194;UBERON:0002308!6.08e-07!9;UBERON:0000125!6.08e-07!9;UBERON:0001872!6.10e-07!5;UBERON:0002771!6.42e-07!3;UBERON:0004733!6.73e-07!12;UBERON:0002028!6.73e-07!12;UBERON:0007277!6.73e-07!12;UBERON:0000064!7.87e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.74e-27;22!UBERON:0001869;2.73e-26;32!UBERON:0002791;1.59e-24;32!UBERON:0000956;5.59e-24;25!UBERON:0000203;5.59e-24;25!UBERON:0001893;6.32e-23;34!UBERON:0003528;4.84e-22;34!UBERON:0002020;4.84e-22;34!UBERON:0000349;7.73e-21;5!UBERON:0001872;1.10e-20;5!UBERON:0001950;2.74e-19;20!UBERON:0002780;5.45e-19;41!UBERON:0001890;5.45e-19;41!UBERON:0000073;4.53e-14;53!UBERON:0002616;4.53e-14;53!UBERON:0001876;7.30e-14;2!UBERON:0001873;1.14e-13;2!UBERON:0001954;1.14e-13;2!UBERON:0002702;1.14e-13;2!UBERON:0003022;1.14e-13;2!UBERON:0002421;1.14e-13;2!UBERON:0002600;1.14e-13;2!UBERON:0002420;4.80e-12;9!UBERON:0007245;4.80e-12;9!UBERON:0010009;4.80e-12;9!UBERON:0010011;4.80e-12;9!UBERON:0000454;4.80e-12;9!UBERON:0001870;1.47e-09;3!UBERON:0005383;1.47e-09;3!UBERON:0005382;1.47e-09;3!UBERON:0001017;2.73e-08;75!UBERON:0000955;5.82e-08;68!UBERON:0000369;1.75e-07;4!UBERON:0002435;1.75e-07;4!UBERON:0000204;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.82e-27,22;UBERON:0002791,5.03e-27,32;UBERON:0001869,5.03e-27,32;UBERON:0003528,1.70e-25,34;UBERON:0002020,1.70e-25,34;UBERON:0001893,1.70e-25,34;UBERON:0000956,4.62e-24,25;UBERON:0000203,4.62e-24,25;UBERON:0000073,2.09e-22,53;UBERON:0002616,2.09e-22,53;UBERON:0002780,2.72e-21,41;UBERON:0001890,2.72e-21,41;UBERON:0003080,2.72e-21,41;UBERON:0006240,2.72e-21,41;UBERON:0001049,3.09e-21,56;UBERON:0005068,3.09e-21,56;UBERON:0006241,3.09e-21,56;UBERON:0007135,3.09e-21,56;UBERON:0000349,6.65e-21,5;UBERON:0001872,8.98e-21,5;UBERON:0001950,2.44e-19,20;UBERON:0000955,2.58e-17,68;UBERON:0006238,2.58e-17,68;UBERON:0001017,1.29e-14,81;UBERON:0003075,1.29e-14,82;UBERON:0007284,1.29e-14,82;UBERON:0003056,1.74e-14,61;UBERON:0002346,6.03e-14,86;UBERON:0001876,7.30e-14,2;UBERON:0001954,9.40e-14,2;UBERON:0003022,9.40e-14,2;UBERON:0002421,9.40e-14,2;UBERON:0002600,9.40e-14,2;UBERON:0002702,1.07e-13,2;UBERON:0001873,1.55e-13,2;UBERON:0010122,1.55e-13,2;UBERON:0001016,3.43e-13,89;UBERON:0002420,5.52e-12,9;UBERON:0007245,5.52e-12,9;UBERON:0010009,5.52e-12,9;UBERON:0010011,5.52e-12,9;UBERON:0000454,5.52e-12,9;UBERON:0010371,1.47e-11,104;UBERON:0001870,1.41e-09,3;UBERON:0005383,1.81e-09,3;UBERON:0005382,1.81e-09,3;UBERON:0010314,4.06e-09,132;UBERON:0007023,6.74e-08,114;UBERON:0000369,2.04e-07,4;UBERON:0002435,2.04e-07,4;UBERON:0000204,2.04e-07,4;UBERON:0010082,2.04e-07,4;UBERON:0004121,6.06e-07,171;UBERON:0000924,6.06e-07,171;UBERON:0006601,6.06e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,2.98244294329889,0.844016498463076,0,0.494411622680279,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,1.08536794762867,0,1.10579259931225,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0,7.36584755131013,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0.795229689809303,1.36203406111576,0.160753148465019,0,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,1.251909307065,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0.434763085832475,0.149254802886874,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0.381382095467167,0,0,0,0.60511520611056,0,0,0,0,0.337687923091973,1.56215619722769,1.2401207790071,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0.611727596791485,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0.316027223465453,0.581207126840626,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0,0.5290268405154,0,0,0,0,0,0,0,0,0.459474497674225,0,0,0.267964130156178,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SCAND3 | |||
}} |
Latest revision as of 12:53, 17 September 2015
Short description: | p3@SCAND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCAND3_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -493bp_to_ENST00000452236, NM_052923, uc003nlo.2_5end |
EntrezGene: | SCAND3 |
HGNC: | 13851 |
UniProt: | Q6R2W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data