FFCP PHASE1:Hg19::chr6:28555605..28555619,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:28555605..28555619,-
|short_description=p3@SCAND3
|description=CAGE_peak_3_at_SCAND3_5end
|association_with_transcript=-493bp_to_ENST00000452236,NM_052923,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114821 | |EntrezGene=114821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13851 | |HGNC=13851 | ||
|TSSclassifier=strong | |||
|UniProt=Q6R2W3 | |UniProt=Q6R2W3 | ||
|association_with_transcript=-493bp_to_ENST00000452236,NM_052923,uc003nlo.2_5end | |||
|cluster_id=chr6:28555605..28555619,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_3_at_SCAND3_5end | |||
|id=chr6:28555605..28555619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.14e-13;2!UBERON:0006215;1.47e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.88e-26!34;UBERON:0003528!4.88e-26!34;UBERON:0001893!9.39e-26!34;UBERON:0001869!1.04e-25!32;UBERON:0001049!3.01e-25!57;UBERON:0005068!3.01e-25!57;UBERON:0006241!3.01e-25!57;UBERON:0007135!3.01e-25!57;UBERON:0002791!2.23e-24!33;UBERON:0002616!4.67e-24!59;UBERON:0002619!5.19e-24!22;UBERON:0000955!4.21e-23!69;UBERON:0006238!4.21e-23!69;UBERON:0001017!5.39e-23!82;UBERON:0002780!3.06e-22!41;UBERON:0001890!3.06e-22!41;UBERON:0006240!3.06e-22!41;UBERON:0003075!1.22e-21!86;UBERON:0007284!1.22e-21!86;UBERON:0003080!1.56e-21!42;UBERON:0005743!2.15e-21!86;UBERON:0000073!1.12e-20!94;UBERON:0001016!1.12e-20!94;UBERON:0001950!1.28e-20!20;UBERON:0000956!1.46e-20!25;UBERON:0000203!1.46e-20!25;UBERON:0002346!3.70e-20!90;UBERON:0003056!5.15e-19!61;UBERON:0000033!3.99e-16!123;UBERON:0007023!8.87e-16!115;UBERON:0000153!8.29e-15!129;UBERON:0007811!8.29e-15!129;UBERON:0004121!1.84e-12!169;UBERON:0000200!7.06e-12!6;UBERON:0000924!7.11e-12!173;UBERON:0006601!7.11e-12!173;UBERON:0000349!1.88e-10!5;UBERON:0001871!6.94e-09!7;UBERON:0000481!1.31e-08!347;UBERON:0000475!2.18e-08!365;UBERON:0000483!4.26e-08!309;UBERON:0000369!5.50e-08!4;UBERON:0002435!5.50e-08!4;UBERON:0000204!5.50e-08!4;UBERON:0010082!5.50e-08!4;UBERON:0000119!7.17e-08!312;UBERON:0002420!2.01e-07!9;UBERON:0007245!2.01e-07!9;UBERON:0010009!2.01e-07!9;UBERON:0010011!2.01e-07!9;UBERON:0000454!2.01e-07!9;UBERON:0000025!4.66e-07!194;UBERON:0002308!6.08e-07!9;UBERON:0000125!6.08e-07!9;UBERON:0001872!6.10e-07!5;UBERON:0002771!6.42e-07!3;UBERON:0004733!6.73e-07!12;UBERON:0002028!6.73e-07!12;UBERON:0007277!6.73e-07!12;UBERON:0000064!7.87e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.74e-27;22!UBERON:0001869;2.73e-26;32!UBERON:0002791;1.59e-24;32!UBERON:0000956;5.59e-24;25!UBERON:0000203;5.59e-24;25!UBERON:0001893;6.32e-23;34!UBERON:0003528;4.84e-22;34!UBERON:0002020;4.84e-22;34!UBERON:0000349;7.73e-21;5!UBERON:0001872;1.10e-20;5!UBERON:0001950;2.74e-19;20!UBERON:0002780;5.45e-19;41!UBERON:0001890;5.45e-19;41!UBERON:0000073;4.53e-14;53!UBERON:0002616;4.53e-14;53!UBERON:0001876;7.30e-14;2!UBERON:0001873;1.14e-13;2!UBERON:0001954;1.14e-13;2!UBERON:0002702;1.14e-13;2!UBERON:0003022;1.14e-13;2!UBERON:0002421;1.14e-13;2!UBERON:0002600;1.14e-13;2!UBERON:0002420;4.80e-12;9!UBERON:0007245;4.80e-12;9!UBERON:0010009;4.80e-12;9!UBERON:0010011;4.80e-12;9!UBERON:0000454;4.80e-12;9!UBERON:0001870;1.47e-09;3!UBERON:0005383;1.47e-09;3!UBERON:0005382;1.47e-09;3!UBERON:0001017;2.73e-08;75!UBERON:0000955;5.82e-08;68!UBERON:0000369;1.75e-07;4!UBERON:0002435;1.75e-07;4!UBERON:0000204;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.82e-27,22;UBERON:0002791,5.03e-27,32;UBERON:0001869,5.03e-27,32;UBERON:0003528,1.70e-25,34;UBERON:0002020,1.70e-25,34;UBERON:0001893,1.70e-25,34;UBERON:0000956,4.62e-24,25;UBERON:0000203,4.62e-24,25;UBERON:0000073,2.09e-22,53;UBERON:0002616,2.09e-22,53;UBERON:0002780,2.72e-21,41;UBERON:0001890,2.72e-21,41;UBERON:0003080,2.72e-21,41;UBERON:0006240,2.72e-21,41;UBERON:0001049,3.09e-21,56;UBERON:0005068,3.09e-21,56;UBERON:0006241,3.09e-21,56;UBERON:0007135,3.09e-21,56;UBERON:0000349,6.65e-21,5;UBERON:0001872,8.98e-21,5;UBERON:0001950,2.44e-19,20;UBERON:0000955,2.58e-17,68;UBERON:0006238,2.58e-17,68;UBERON:0001017,1.29e-14,81;UBERON:0003075,1.29e-14,82;UBERON:0007284,1.29e-14,82;UBERON:0003056,1.74e-14,61;UBERON:0002346,6.03e-14,86;UBERON:0001876,7.30e-14,2;UBERON:0001954,9.40e-14,2;UBERON:0003022,9.40e-14,2;UBERON:0002421,9.40e-14,2;UBERON:0002600,9.40e-14,2;UBERON:0002702,1.07e-13,2;UBERON:0001873,1.55e-13,2;UBERON:0010122,1.55e-13,2;UBERON:0001016,3.43e-13,89;UBERON:0002420,5.52e-12,9;UBERON:0007245,5.52e-12,9;UBERON:0010009,5.52e-12,9;UBERON:0010011,5.52e-12,9;UBERON:0000454,5.52e-12,9;UBERON:0010371,1.47e-11,104;UBERON:0001870,1.41e-09,3;UBERON:0005383,1.81e-09,3;UBERON:0005382,1.81e-09,3;UBERON:0010314,4.06e-09,132;UBERON:0007023,6.74e-08,114;UBERON:0000369,2.04e-07,4;UBERON:0002435,2.04e-07,4;UBERON:0000204,2.04e-07,4;UBERON:0010082,2.04e-07,4;UBERON:0004121,6.06e-07,171;UBERON:0000924,6.06e-07,171;UBERON:0006601,6.06e-07,171 | |||
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| ||
|short_description=p3@SCAND3 | |||
}} | }} |
Latest revision as of 12:53, 17 September 2015
Short description: | p3@SCAND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCAND3_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -493bp_to_ENST00000452236, NM_052923, uc003nlo.2_5end |
EntrezGene: | SCAND3 |
HGNC: | 13851 |
UniProt: | Q6R2W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data