FFCP PHASE1:Hg19::chr17:73840854..73840883,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:73840854..73840883,-
|short_description=p6@UNC13D
|description=CAGE_peak_6_at_UNC13D_5end
|association_with_transcript=-3bp_to_uc010wsk.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201294 | |EntrezGene=201294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23147 | |HGNC=23147 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_uc010wsk.1_5end | |||
|cluster_id=chr17:73840854..73840883,- | |||
|description=CAGE_peak_6_at_UNC13D_5end | |||
|id=chr17:73840854..73840883,- | |||
|ontology_enrichment_celltype=CL:0000066!3.38e-16!254;CL:0002076!1.41e-07!43;CL:0000223!7.25e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.80e-11;19!CL:0000244;5.45e-09;4!CL:0000731;5.45e-09;4!CL:0002368;1.79e-07;13!CL:0002577;2.38e-07;3!CL:0002541;3.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-20,253;CL:0000349,1.83e-11,19;CL:0000244,5.08e-09,4;CL:0000731,5.08e-09,4;CL:0002368,1.38e-07,13;CL:0002577,2.21e-07,3;CL:0002541,3.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.93e-09;29 | |||
|ontology_enrichment_disease=DOID:305!3.86e-17!106;DOID:162!6.24e-12!235;DOID:14566!4.79e-11!239;DOID:0050687!5.21e-10!143;DOID:0050686!9.97e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.61e-18,106;DOID:0050687,3.01e-13,143;DOID:162,3.47e-12,235;DOID:14566,1.29e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.67e-15!169;UBERON:0000925!7.67e-15!169;UBERON:0006595!7.67e-15!169;UBERON:0000065!5.46e-12!53;UBERON:0000077!2.85e-11!130;UBERON:0008947!1.63e-10!38;UBERON:0003258!1.63e-10!38;UBERON:0005631!4.05e-10!14;UBERON:0000158!4.05e-10!14;UBERON:0004921!5.79e-10!129;UBERON:0004185!5.79e-10!129;UBERON:0001004!1.23e-09!72;UBERON:0001041!1.44e-09!98;UBERON:0001007!2.08e-09!155;UBERON:0001555!2.08e-09!155;UBERON:0007026!2.08e-09!155;UBERON:0000072!7.88e-09!46;UBERON:0001737!2.21e-08!9;UBERON:0003124!3.87e-08!7;UBERON:0000478!2.10e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.86e-15;9!UBERON:0001557;3.86e-15;9!UBERON:0005631;9.57e-13;10!UBERON:0000158;9.57e-13;10!UBERON:0000478;3.44e-12;24!UBERON:0000065;9.87e-10;44!UBERON:0001987;2.56e-09;4!UBERON:0000072;3.12e-09;37!UBERON:0000305;1.37e-07;7!UBERON:0003124;3.41e-07;3!UBERON:0000920;3.41e-07;3!UBERON:0000365;3.84e-07;5!UBERON:0005911;5.32e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.41e-20,14;UBERON:0000158,4.41e-20,14;UBERON:0001737,2.48e-15,9;UBERON:0003124,7.65e-15,7;UBERON:0000478,3.47e-12,24;UBERON:0008947,3.75e-11,38;UBERON:0003258,3.75e-11,38;UBERON:0000065,2.16e-10,54;UBERON:0004119,8.00e-10,160;UBERON:0000925,8.00e-10,160;UBERON:0006595,8.00e-10,160;UBERON:0001987,2.38e-09,4;UBERON:0004340,2.38e-09,4;UBERON:0000072,4.30e-09,47;UBERON:0000305,1.41e-07,7;UBERON:0001557,1.45e-07,19;UBERON:0000365,3.64e-07,5;UBERON:0000920,3.64e-07,3;UBERON:0001004,6.31e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.17747692052565,11.8626198555313,4.36882744260345,10.2869121509097,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.23150884174919,1.25937250101887,0,0.383829398097213,0.154816123316076,1.83884244895785,1.50602959389125,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0,0,1.70763890732835,0.587237189370939,0.764546456250458,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0,0.221533894583621,0,0.512365278902701,0.520237390239513,0.164437904603676,0.276350017785848,0.869409257205157,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,1.09288586487763,0.370784442784429,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,2.9576700009961,2.86593973132773,2.16909926895134,3.41911315470421,2.39667388501647,3.08451804844426,3.10112008768378,1.76599318612811,1.53898862778556,0,1.40241773803446,0,0,0,0,0,0,1.96781501668982,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0.702012795417713,0.445893486866185,0,0.503946384596579,0.425325291727159,0.806026704325635,1.74380363108377,2.30029607499127,0.492663237895943,0.264145302039678,0.621984346622316,0.720599767084807,0.88369703398466,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0.336255431980582,0,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,4.85004114314015,19.9722527412596,13.3051729065059,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0.764628819135115,1.66215201785745,1.11937377361089,0.438519753291869,0.522870902049801,1.28225062558195,0.328014645699706,0.325378394664303,6.80070676874967,0.0915694648183434,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.495854746082934,3.2672311452068,1.53135254993501,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.48111056362756,0.670302275535787,0,4.14232723417828,5.59656984472599,11.7930032967338,8.42517291719684,3.44585100310439,0,0,2.27858874869665,0,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,2.20536194382929,0,0.144269212976445,0.213425530045242,0.318852545457645,0.399158742865633,0,1.2700414963433,0,0,0.456469358066384,0.626719583092093,2.50634477090067,0.50787533340481,0.1605880751037,0,0,0,0.614481528616916,0,0,0.976940477010201,0.556812347790485,1.23087398947712,1.35227839237992,0.33307196799782,0,0,0,0,3.78907506543426,0,7.1623345421307,4.75143489332222,6.45037474408387,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,1.6001024709939,0,1.70749867179921,1.07412704805365,0,0,0,0,0,0,0,0.7812832832557,0.524759999977174,0,3.18621655199399,4.57656570526979,3.07303986298317,0.344743373241465,0,0,0,0,0,0,0,0,0.871507708151921,0.278847488557207,0.230850775511391,0,1.61394733071642,6.55230804191337,1.84700532267414,9.8890359516895,3.11431817566332,24.5195996968572,0,0,0,2.93274358802335,4.70550082362575,2.3495022176618,0.948768663620925,0.794682894901893,6.32994193584081,3.26465616318295,0.848118428603645,0,0,0.265372693510018,0,0.889563386041866,0.370691816839509,0.313265848516366,0,0,0,0,3.13063390291344,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0.664653872707185,1.323967823502,0.313932918407225,1.19472429772959,0.284609546029793,0,0.520679215005393,0.587954384486266,4.96237477508295,0,0,1.16107597546902,1.38869702463753,1.39596276990456,0.678923115418936,0,0,0,0,0.0633107959558787,1.56441106187842,1.84365286578528,0.213452994739353,0.999048047910651,0,0,0,0,2.98206085357038,4.47818665771911,3.53350935791397,4.39331954511799,0,0,0,0,0,2.14882720709979,1.05154941711726,0,0.229160424011684,0,7.78748101946065,0,0,0,0,0,0.157566364614447,0.247247575143499,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,5.18171032762502,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0.13223260174269,4.61934462287689,2.11444506695002,0.640724475406168,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0,1.49976489554528,0,0,3.0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| ||
|short_description=p6@UNC13D | |||
}} | }} |
Latest revision as of 12:45, 17 September 2015
Short description: | p6@UNC13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UNC13D_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_uc010wsk.1_5end |
EntrezGene: | UNC13D |
HGNC: | 23147 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.17e-20 | 253 |
extraembryonic cell | 1.83e-11 | 19 |
transitional epithelial cell | 5.08e-09 | 4 |
urothelial cell | 5.08e-09 | 4 |
respiratory epithelial cell | 1.38e-07 | 13 |
placental epithelial cell | 2.21e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.41e-20 | 14 |
membranous layer | 4.41e-20 | 14 |
larynx | 2.48e-15 | 9 |
chorion | 7.65e-15 | 7 |
extraembryonic structure | 3.47e-12 | 24 |
respiratory primordium | 3.75e-11 | 38 |
endoderm of foregut | 3.75e-11 | 38 |
respiratory tract | 2.16e-10 | 54 |
endoderm-derived structure | 8.00e-10 | 160 |
endoderm | 8.00e-10 | 160 |
presumptive endoderm | 8.00e-10 | 160 |
placenta | 2.38e-09 | 4 |
allantois | 2.38e-09 | 4 |
segment of respiratory tract | 4.30e-09 | 47 |
amnion | 1.41e-07 | 7 |
upper respiratory tract | 1.45e-07 | 19 |
urothelium | 3.64e-07 | 5 |
egg chorion | 3.64e-07 | 3 |
respiratory system | 6.31e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.61e-18 | 106 |
cell type cancer | 3.01e-13 | 143 |
cancer | 3.47e-12 | 235 |
disease of cellular proliferation | 1.29e-11 | 239 |