FFCP PHASE1:Hg19::chr12:13529594..13529616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26598 | |HGNC=26598 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3P8 | |UniProt=F5H3P8 | ||
|association_with_transcript=0bp_to_ENST00000539026_5end | |association_with_transcript=0bp_to_ENST00000539026_5end | ||
|cluster_id=chr12:13529594..13529616,- | |||
|description=CAGE_peak_1_at_C12orf36_5end | |description=CAGE_peak_1_at_C12orf36_5end | ||
|id=chr12:13529594..13529616,- | |id=chr12:13529594..13529616,- | ||
|ontology_enrichment_celltype=CL:0002076!2.54e-21!43;CL:0000223!5.84e-16!59;CL:0000066!7.54e-13!254;CL:0002251!1.81e-10!21;CL:0002368!4.13e-08!13 | |ontology_enrichment_celltype=CL:0002076!2.54e-21!43;CL:0000223!5.84e-16!59;CL:0000066!7.54e-13!254;CL:0002251!1.81e-10!21;CL:0002368!4.13e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.37e-15;3!CL:0002251;3.73e-09;20!CL:0002076;2.39e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.32e-15,3;CL:0002251,3.62e-09,20;CL:0002076,3.97e-09,42 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.92e-13;1!UBERON:0006242;1.75e-12;1 | |||
|ontology_enrichment_disease=DOID:299!8.44e-13!25;DOID:305!7.98e-12!106;DOID:1749!1.01e-09!14;DOID:3493!1.33e-07!2;DOID:0050687!3.03e-07!143 | |ontology_enrichment_disease=DOID:299!8.44e-13!25;DOID:305!7.98e-12!106;DOID:1749!1.01e-09!14;DOID:3493!1.33e-07!2;DOID:0050687!3.03e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3111;3.64e-12;1!DOID:3603;3.64e-12;1!DOID:3493;4.56e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.75e-12,1;DOID:3603,2.75e-12,1;DOID:3493,4.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.10e-11!169;UBERON:0000925!1.10e-11!169;UBERON:0006595!1.10e-11!169;UBERON:0001007!1.81e-10!155;UBERON:0001555!1.81e-10!155;UBERON:0007026!1.81e-10!155;UBERON:0001155!3.93e-09!9;UBERON:0004921!9.49e-09!129;UBERON:0004185!9.49e-09!129;UBERON:0000344!2.78e-08!12;UBERON:0000166!3.60e-08!21;UBERON:0000059!2.15e-07!11;UBERON:0001004!2.62e-07!72;UBERON:0005409!5.03e-07!35;UBERON:0000161!7.04e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!1.10e-11!169;UBERON:0000925!1.10e-11!169;UBERON:0006595!1.10e-11!169;UBERON:0001007!1.81e-10!155;UBERON:0001555!1.81e-10!155;UBERON:0007026!1.81e-10!155;UBERON:0001155!3.93e-09!9;UBERON:0004921!9.49e-09!129;UBERON:0004185!9.49e-09!129;UBERON:0000344!2.78e-08!12;UBERON:0000166!3.60e-08!21;UBERON:0000059!2.15e-07!11;UBERON:0001004!2.62e-07!72;UBERON:0005409!5.03e-07!35;UBERON:0000161!7.04e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001155;3.20e-20;9!UBERON:0000059;1.34e-16;11!UBERON:0001949;1.37e-15;3!UBERON:0001154;9.92e-13;1!UBERON:0001153;9.92e-13;1!UBERON:0009854;9.92e-13;1!UBERON:0005409;3.34e-12;22!UBERON:0004921;1.09e-10;33!UBERON:0000160;3.08e-10;17!UBERON:0001555;1.95e-07;54!UBERON:0003126;3.40e-07;7!UBERON:0003929;3.40e-07;7!UBERON:0001005;3.40e-07;7!UBERON:0003127;7.19e-07;2!UBERON:0006562;7.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,3.05e-20,9;UBERON:0000059,1.28e-16,11;UBERON:0001949,1.32e-15,3;UBERON:0001154,9.92e-13,1;UBERON:0001153,9.92e-13,1;UBERON:0001045,9.92e-13,1;UBERON:0001007,5.18e-11,145;UBERON:0001555,5.18e-11,145;UBERON:0007026,5.18e-11,145;UBERON:0005409,8.57e-11,25;UBERON:0000160,3.00e-10,17;UBERON:0004119,8.27e-10,160;UBERON:0000925,8.27e-10,160;UBERON:0006595,8.27e-10,160;UBERON:0004921,5.19e-08,118;UBERON:0003126,3.68e-07,7;UBERON:0001005,3.68e-07,7;UBERON:0003127,8.06e-07,2 | |||
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| ||
|short_description=p1@C12orf36 | |short_description=p1@C12orf36 | ||
}} | }} |
Latest revision as of 12:32, 17 September 2015
Short description: | p1@C12orf36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf36_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539026_5end |
EntrezGene: | NA |
HGNC: | 26598 |
UniProt: | F5H3P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.32e-15 | 3 |
epithelial cell of alimentary canal | 3.62e-09 | 20 |
endo-epithelial cell | 3.97e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
colon | 3.05e-20 | 9 |
large intestine | 1.28e-16 | 11 |
gingival epithelium | 1.32e-15 | 3 |
vermiform appendix | 9.92e-13 | 1 |
caecum | 9.92e-13 | 1 |
midgut | 9.92e-13 | 1 |
digestive system | 5.18e-11 | 145 |
digestive tract | 5.18e-11 | 145 |
primitive gut | 5.18e-11 | 145 |
gastrointestinal system | 8.57e-11 | 25 |
intestine | 3.00e-10 | 17 |
endoderm-derived structure | 8.27e-10 | 160 |
endoderm | 8.27e-10 | 160 |
presumptive endoderm | 8.27e-10 | 160 |
subdivision of digestive tract | 5.19e-08 | 118 |
trachea | 3.68e-07 | 7 |
respiratory airway | 3.68e-07 | 7 |
open tracheal system trachea | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.75e-12 | 1 |
mucinous cystadenocarcinoma | 2.75e-12 | 1 |
signet ring cell adenocarcinoma | 4.56e-07 | 2 |