FFCP PHASE1:Hg19::chr12:13349711..13349728,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2012 | |EntrezGene=2012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3333 | |HGNC=3333 | ||
|TSSclassifier=strong | |||
|UniProt=B4DRR1,F5GYV0 | |UniProt=B4DRR1,F5GYV0 | ||
|association_with_transcript=0bp_to_ENST00000396301,ENST00000535134,ENST00000538364,ENST00000541935_5end | |association_with_transcript=0bp_to_ENST00000396301,ENST00000535134,ENST00000538364,ENST00000541935_5end | ||
|cluster_id=chr12:13349711..13349728,+ | |||
|description=CAGE_peak_1_at_EMP1_5end | |description=CAGE_peak_1_at_EMP1_5end | ||
|id=chr12:13349711..13349728,+ | |id=chr12:13349711..13349728,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.78e-22!180;CL:0000057!1.21e-16!75;CL:0002371!1.80e-11!591;CL:0000222!9.21e-11!119;CL:0002620!9.94e-09!23;CL:0000680!3.90e-08!57;CL:0000056!3.90e-08!57;CL:0000355!3.90e-08!57;CL:0000144!6.99e-08!625;CL:0000048!1.06e-07!430;CL:0000723!1.65e-07!436;CL:0000187!2.81e-07!54;CL:0002057!6.34e-07!42;CL:0002139!7.13e-07!24 | |ontology_enrichment_celltype=CL:0000055!3.78e-22!180;CL:0000057!1.21e-16!75;CL:0002371!1.80e-11!591;CL:0000222!9.21e-11!119;CL:0002620!9.94e-09!23;CL:0000680!3.90e-08!57;CL:0000056!3.90e-08!57;CL:0000355!3.90e-08!57;CL:0000144!6.99e-08!625;CL:0000048!1.06e-07!430;CL:0000723!1.65e-07!436;CL:0000187!2.81e-07!54;CL:0002057!6.34e-07!42;CL:0002139!7.13e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.87e-11;39!CL:0000234;3.87e-11;39!CL:0000860;4.26e-11;33!CL:0002057;4.26e-11;33!CL:0002620;9.24e-09;23!CL:0000057;6.40e-07;73!CL:0002139;6.69e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-16,76;CL:0000222,2.15e-11,121;CL:0002620,9.34e-09,23;CL:0000473,1.48e-08,48;CL:0000234,1.48e-08,48;CL:0000680,1.86e-08,58;CL:0000056,1.86e-08,58;CL:0000355,1.86e-08,58;CL:0000048,8.83e-08,427;CL:0000723,1.28e-07,433;CL:0000187,1.38e-07,55;CL:0002139,6.81e-07,24;CL:0000860,8.40e-07,42;CL:0002057,8.40e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.16e-18!659;UBERON:0000467!5.78e-18!625;UBERON:0000480!9.16e-18!626;UBERON:0000926!3.54e-16!448;UBERON:0004120!3.54e-16!448;UBERON:0006603!3.54e-16!448;UBERON:0002204!4.91e-13!167;UBERON:0000914!4.62e-12!83;UBERON:0002329!4.62e-12!83;UBERON:0003077!4.62e-12!83;UBERON:0003059!4.62e-12!83;UBERON:0007282!4.62e-12!83;UBERON:0009618!4.62e-12!83;UBERON:0007285!4.62e-12!83;UBERON:0004872!1.21e-11!84;UBERON:0002050!3.56e-11!605;UBERON:0005423!3.56e-11!605;UBERON:0000055!4.38e-11!69;UBERON:0000923!7.79e-11!604;UBERON:0005291!7.79e-11!604;UBERON:0006598!7.79e-11!604;UBERON:0002532!7.79e-11!604;UBERON:0003102!9.94e-11!95;UBERON:0004290!1.24e-10!70;UBERON:0003081!1.38e-10!216;UBERON:0002049!1.62e-10!79;UBERON:0007798!1.62e-10!79;UBERON:0000922!3.26e-10!612;UBERON:0001981!5.44e-10!60;UBERON:0007500!5.44e-10!60;UBERON:0004537!5.44e-10!60;UBERON:0006965!5.44e-10!60;UBERON:0000486!8.26e-10!82;UBERON:0001637!4.97e-09!42;UBERON:0003509!4.97e-09!42;UBERON:0004572!4.97e-09!42;UBERON:0002199!9.41e-09!45;UBERON:0002416!9.41e-09!45;UBERON:0000062!1.21e-08!511;UBERON:0002097!7.77e-08!40;UBERON:0001134!1.18e-07!61;UBERON:0002036!1.18e-07!61;UBERON:0003082!1.18e-07!61;UBERON:0002385!1.56e-07!63;UBERON:0001015!1.56e-07!63;UBERON:0000383!1.56e-07!63;UBERON:0004573!1.75e-07!33;UBERON:0004571!1.75e-07!33;UBERON:0003914!3.02e-07!118;UBERON:0004923!6.65e-07!57;UBERON:0004535!7.76e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.64e-07;42!UBERON:0003509;3.64e-07;42!UBERON:0004572;3.64e-07;42!UBERON:0004573;3.76e-07;33!UBERON:0004571;3.76e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.39e-18,315;UBERON:0004120,3.39e-18,315;UBERON:0006603,3.39e-18,315;UBERON:0002204,2.43e-14,167;UBERON:0004872,5.77e-12,83;UBERON:0000055,2.14e-11,68;UBERON:0002329,5.60e-11,71;UBERON:0003059,5.60e-11,71;UBERON:0007282,5.60e-11,71;UBERON:0004290,5.60e-11,71;UBERON:0009618,5.60e-11,71;UBERON:0007524,6.47e-11,73;UBERON:0002049,8.68e-11,78;UBERON:0007798,8.68e-11,78;UBERON:0003102,1.10e-10,99;UBERON:0003081,1.12e-10,203;UBERON:0003077,1.41e-10,72;UBERON:0007285,1.41e-10,72;UBERON:0007500,2.65e-10,59;UBERON:0001981,2.65e-10,59;UBERON:0004537,2.65e-10,59;UBERON:0006965,2.65e-10,59;UBERON:0007503,3.33e-10,78;UBERON:0000486,3.94e-10,83;UBERON:0005423,9.91e-10,581;UBERON:0002050,1.21e-09,564;UBERON:0000923,1.74e-09,560;UBERON:0010316,1.74e-09,560;UBERON:0005291,1.74e-09,560;UBERON:0006598,1.74e-09,560;UBERON:0010317,1.74e-09,560;UBERON:0002532,1.74e-09,560;UBERON:0002199,2.61e-09,46;UBERON:0002416,2.61e-09,46;UBERON:0000922,3.19e-09,592;UBERON:0001637,4.65e-09,42;UBERON:0003509,4.65e-09,42;UBERON:0004572,4.65e-09,42;UBERON:0004923,1.60e-08,66;UBERON:0002097,2.20e-08,41;UBERON:0001134,5.81e-08,62;UBERON:0002036,5.81e-08,62;UBERON:0003082,5.81e-08,62;UBERON:0002385,7.77e-08,64;UBERON:0001015,7.77e-08,64;UBERON:0000383,7.77e-08,64;UBERON:0000490,1.20e-07,148;UBERON:0004573,1.66e-07,33;UBERON:0004571,1.66e-07,33;UBERON:0004535,5.94e-07,109;UBERON:0003914,6.33e-07,117;UBERON:0001009,8.59e-07,112 | |||
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| ||
|short_description=p1@EMP1 | |short_description=p1@EMP1 | ||
}} | }} |
Latest revision as of 11:56, 17 September 2015
Short description: | p1@EMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396301, ENST00000535134, ENST00000538364, ENST00000541935_5end |
EntrezGene: | EMP1 |
HGNC: | 3333 |
UniProt: | B4DRR1F5GYV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-16 | 76 |
mesodermal cell | 2.15e-11 | 121 |
skin fibroblast | 9.34e-09 | 23 |
defensive cell | 1.48e-08 | 48 |
phagocyte | 1.48e-08 | 48 |
muscle precursor cell | 1.86e-08 | 58 |
myoblast | 1.86e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-08 | 58 |
multi fate stem cell | 8.83e-08 | 427 |
somatic stem cell | 1.28e-07 | 433 |
muscle cell | 1.38e-07 | 55 |
endothelial cell of vascular tree | 6.81e-07 | 24 |
classical monocyte | 8.40e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.40e-07 | 42 |